Gene: Sopen12g004680

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g004680
  • Transcript Identifier Sopen12g004680.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 3257726-3265391 : positive

Gene Family Information

  • ID HOM05D000524
  • #Genes/#Species 1038/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g004680.1

Descriptions

  • Description Encodes a endomembrane-localized synaptotagmin. Synaptotagmin family proteins are calcium sensors that regulate exocytosis in mammalian cells. | NTMC2T2.1 | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: endomembrane system, plasma membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein , C2 calcium/lipid-binding domain, CaLB , C2 region , C2 calcium-dependent membrane targeting | BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008289
IEA
InterProlipid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G05500
GO:0012505
ISO
PLAZA Integrative Orthologyendomembrane system AT1G05500
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT1G05500
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G05500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000008 C2 domain
IPR045050 Synaptotagmin, plant
IPR035892 C2 domain superfamily
IPR039010 Synaptotagmin, SMP domain
Mapman id Description
35.1 not assigned.annotated