Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc00g500328.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 5.1e-78 294.3 141 100.0
Solyc00g500129.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 1.4e-72 276.2 177 79.7
Solyc00g500199.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 1.4e-72 276.2 177 79.7
Solyc00g500033.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 4.8e-60 234.6 113 100.0
Solyc00g500078.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 4.8e-60 234.6 113 100.0
Solyc00g500151.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 4.5e-58 228.0 113 96.5
Solyc05g023725.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 5.6e-53 211.1 129 82.9
Gorai.002G146700 Gossypium raimondii HOM05D008922 ORTHO05D010978 6.4e-49 197.6 113 86.7
Solyc10g012213.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 6.4e-49 197.6 100 95.0
Migut.D02168 Erythranthe guttata HOM05D008922 ORTHO05D010978 1.5e-45 186.4 92 97.8
HanXRQChr00c0585g0576281 Helianthus annuus HOM05D008922 ORTHO05D010978 1.5e-45 186.4 91 98.9
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 1.4e-43 179.9 120 75.8
PGSC0003DMG400004211 Solanum tuberosum HOM05D001387 ORTHO05D001250 4.0e-43 178.3 86 100.0
Gohir.1Z049566 Gossypium hirsutum HOM05D008922 ORTHO05D010978 4.5e-42 174.9 91 93.4
CAN.G484.107 Capsicum annuum HOM05D008922 ORTHO05D010978 1.7e-41 172.9 97 85.6
ScUNg0000580 Simmondsia chinensis HOM05D001387 ORTHO05D010978 8.4e-41 170.6 90 91.1
RhsimPtG0002400 Rhododendron simsii HOM05D008922 ORTHO05D010978 1.0e-38 163.7 91 86.8
Gohir.D04G160150 Gossypium hirsutum HOM05D008922 ORTHO05D010978 3.9e-38 161.8 91 86.8
Eucgr.J02736 Eucalyptus grandis HOM05D008922 ORTHO05D010978 5.1e-38 161.4 81 96.3
Gohir.A12G138620 Gossypium hirsutum HOM05D008922 ORTHO05D010978 5.1e-38 161.4 82 92.7
Migut.A01147 Erythranthe guttata HOM05D008922 ORTHO05D010978 3.3e-37 158.7 79 96.2
Gorai.007G083900 Gossypium raimondii HOM05D008922 ORTHO05D010978 2.1e-36 156.0 83 90.4
Oeu045555.1 Olea europaea HOM05D008922 ORTHO05D010978 2.4e-35 152.5 92 81.5
Gorai.005G093900 Gossypium raimondii HOM05D008922 ORTHO05D010978 5.3e-35 151.4 90 83.3
Gohir.D02G149550 Gossypium hirsutum HOM05D008922 ORTHO05D010978 2.6e-34 149.1 85 84.7
SEGI_05822 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 2.8e-28 129.0 98 67.3
Gorai.012G032000 Gossypium raimondii HOM05D008922 ORTHO05D010978 3.1e-27 125.6 83 78.3
SEGI_05748 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 1.5e-26 123.2 89 67.4
Gorai.011G182500 Gossypium raimondii HOM05D008922 ORTHO05D010978 3.2e-24 115.5 92 65.2
HanXRQChr13g0413491 Helianthus annuus HOM05D005034 ORTHO05D006234 8.8e-22 107.5 51 96.1
HanXRQChr12g0369781 Helianthus annuus HOM05D008922 ORTHO05D010978 4.4e-21 105.1 53 92.5
Oeu028750.1 Olea europaea HOM05D008922 ORTHO05D010978 4.1e-19 98.6 53 83.0
HPP92_028403 Vanilla planifolia HOM05D008922 ORTHO05D010978 6.9e-19 97.8 51 88.2
HPP92_028411 Vanilla planifolia HOM05D008922 ORTHO05D010978 6.9e-19 97.8 51 88.2
HPP92_028427 Vanilla planifolia HOM05D008922 ORTHO05D010978 6.9e-19 97.8 51 88.2
Medtr4g076920 Medicago truncatula HOM05D008922 ORTHO05D010978 3.4e-18 95.5 51 90.2
Oeu028760.1 Olea europaea HOM05D001387 ORTHO05D001250 1.0e-17 94.0 50 90.0
EL10As9g23921 Beta vulgaris HOM05D008922 ORTHO05D010978 3.2e-16 89.0 56 76.8
SGA_v2.0_scaffold477G52163 Striga asiatica HOM05D008922 ORTHO05D010978 2.3e-14 82.8 44 88.6
Sc15g0001780 Simmondsia chinensis HOM05D001387 ORTHO05D001250 3.9e-14 82.0 40 90.0
Sopen01g027160 Solanum pennellii HOM05D008922 ORTHO05D010978 1.5e-13 80.1 37 94.6
HanXRQChr00c0554g0575681 Helianthus annuus HOM05D008922 ORTHO05D010978 5.7e-13 78.2 39 89.7
arahy.Tifrunner.gnm1.ann1.9U8SPX Arachis hypogaea HOM05D008922 ORTHO05D010978 3.7e-12 75.5 74 58.1
Psat4g046840 Pisum sativum HOM05D008922 ORTHO05D010978 3.2e-08 62.4 38 76.3
HanXRQChr08g0235731 Helianthus annuus HOM05D000445 ORTHO05D010978 2.7e-07 59.3 30 83.3


User provided reference genes

Program Settings