Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc00g500151.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 1.9e-89 332.4 156 100.0
Solyc00g500033.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 5.1e-79 297.7 143 96.5
Solyc00g500078.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 5.1e-79 297.7 143 96.5
Solyc00g500129.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 3.6e-77 291.6 140 97.1
Solyc00g500199.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 3.6e-77 291.6 140 97.1
Solyc00g500328.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 2.2e-58 229.2 113 96.5
Solyc05g023725.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 8.1e-53 210.7 130 80.8
Gorai.002G146700 Gossypium raimondii HOM05D008922 ORTHO05D010978 6.0e-48 194.5 115 82.6
Solyc10g012213.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 5.1e-47 191.4 100 91.0
HanXRQChr00c0585g0576281 Helianthus annuus HOM05D008922 ORTHO05D010978 1.4e-44 183.3 92 94.6
Migut.D02168 Erythranthe guttata HOM05D008922 ORTHO05D010978 2.6e-43 179.1 91 93.4
PGSC0003DMG400004211 Solanum tuberosum HOM05D001387 ORTHO05D001250 2.9e-42 175.6 87 95.4
CAN.G484.107 Capsicum annuum HOM05D008922 ORTHO05D010978 3.8e-42 175.3 99 83.8
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 3.2e-41 172.2 87 93.1
Gohir.1Z049566 Gossypium hirsutum HOM05D008922 ORTHO05D010978 4.2e-41 171.8 92 89.1
ScUNg0000580 Simmondsia chinensis HOM05D001387 ORTHO05D010978 5.5e-41 171.4 132 67.4
RhsimPtG0002400 Rhododendron simsii HOM05D008922 ORTHO05D010978 3.5e-40 168.7 92 85.9
Gohir.D04G160150 Gossypium hirsutum HOM05D008922 ORTHO05D010978 9.7e-38 160.6 92 83.7
Gohir.A12G138620 Gossypium hirsutum HOM05D008922 ORTHO05D010978 1.3e-37 160.2 83 90.4
Eucgr.J02736 Eucalyptus grandis HOM05D008922 ORTHO05D010978 3.1e-36 155.6 81 91.4
Migut.A01147 Erythranthe guttata HOM05D008922 ORTHO05D010978 2.0e-35 152.9 79 91.1
Gorai.007G083900 Gossypium raimondii HOM05D008922 ORTHO05D010978 4.5e-35 151.8 90 80.0
Gorai.005G093900 Gossypium raimondii HOM05D008922 ORTHO05D010978 1.7e-34 149.8 92 81.5
Gohir.D02G149550 Gossypium hirsutum HOM05D008922 ORTHO05D010978 1.1e-33 147.1 87 80.5
Oeu045555.1 Olea europaea HOM05D008922 ORTHO05D010978 1.1e-33 147.1 91 78.0
SEGI_05822 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 8.2e-29 131.0 89 71.9
SEGI_05748 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 2.9e-26 122.5 84 71.4
Gorai.012G032000 Gossypium raimondii HOM05D008922 ORTHO05D010978 1.1e-25 120.6 83 75.9
Gorai.011G182500 Gossypium raimondii HOM05D008922 ORTHO05D010978 2.6e-22 109.4 91 61.5
HanXRQChr12g0369781 Helianthus annuus HOM05D008922 ORTHO05D010978 1.4e-20 103.6 53 90.6
HanXRQChr13g0413491 Helianthus annuus HOM05D005034 ORTHO05D006234 1.4e-20 103.6 51 92.2
Oeu028760.1 Olea europaea HOM05D001387 ORTHO05D001250 7.7e-19 97.8 50 94.0
HPP92_028403 Vanilla planifolia HOM05D008922 ORTHO05D010978 1.7e-18 96.7 52 84.6
HPP92_028411 Vanilla planifolia HOM05D008922 ORTHO05D010978 1.7e-18 96.7 52 84.6
HPP92_028427 Vanilla planifolia HOM05D008922 ORTHO05D010978 1.7e-18 96.7 52 84.6
Medtr4g076920 Medicago truncatula HOM05D008922 ORTHO05D010978 1.1e-17 94.0 45 100.0
Oeu028750.1 Olea europaea HOM05D008922 ORTHO05D010978 1.9e-17 93.2 52 78.8
EL10As9g23921 Beta vulgaris HOM05D008922 ORTHO05D010978 1.0e-15 87.4 42 90.5
SGA_v2.0_scaffold477G52163 Striga asiatica HOM05D008922 ORTHO05D010978 7.4e-14 81.3 44 86.4
Sc15g0001780 Simmondsia chinensis HOM05D001387 ORTHO05D001250 1.7e-13 80.1 42 83.3
HanXRQChr00c0554g0575681 Helianthus annuus HOM05D008922 ORTHO05D010978 1.1e-12 77.4 40 85.0
Sopen01g027160 Solanum pennellii HOM05D008922 ORTHO05D010978 1.8e-12 76.6 37 89.2
arahy.Tifrunner.gnm1.ann1.9U8SPX Arachis hypogaea HOM05D008922 ORTHO05D010978 4.1e-12 75.5 74 56.8
Psat4g046840 Pisum sativum HOM05D008922 ORTHO05D010978 2.5e-09 66.2 41 73.2
HanXRQChr08g0235731 Helianthus annuus HOM05D000445 ORTHO05D010978 3.2e-09 65.9 75 50.7


User provided reference genes

Program Settings