Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc00g500033.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 2.2e-96 355.5 169 100.0
Solyc00g500078.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 2.2e-96 355.5 169 100.0
Solyc00g500129.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 7.2e-79 297.4 140 100.0
Solyc00g500151.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 7.2e-79 297.4 143 96.5
Solyc00g500199.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 7.2e-79 297.4 140 100.0
Solyc00g500328.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 3.3e-60 235.3 113 100.0
Solyc05g023725.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 8.0e-54 214.2 130 83.1
Gorai.002G146700 Gossypium raimondii HOM05D008922 ORTHO05D010978 1.2e-49 200.3 115 86.1
Solyc10g012213.1 Solanum lycopersicum HOM05D008922 ORTHO05D010978 7.7e-49 197.6 100 95.0
HanXRQChr00c0585g0576281 Helianthus annuus HOM05D008922 ORTHO05D010978 2.1e-46 189.5 92 98.9
Migut.D02168 Erythranthe guttata HOM05D008922 ORTHO05D010978 5.2e-45 184.9 91 97.8
PGSC0003DMG400004211 Solanum tuberosum HOM05D001387 ORTHO05D001250 5.7e-44 181.4 87 100.0
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 6.3e-43 177.9 87 97.7
Gohir.1Z049566 Gossypium hirsutum HOM05D008922 ORTHO05D010978 6.3e-43 177.9 92 93.5
CAN.G484.107 Capsicum annuum HOM05D008922 ORTHO05D010978 2.4e-42 176.0 99 84.8
ScUNg0000580 Simmondsia chinensis HOM05D001387 ORTHO05D010978 5.4e-42 174.9 125 72.0
RhsimPtG0002400 Rhododendron simsii HOM05D008922 ORTHO05D010978 1.5e-39 166.8 92 87.0
Gohir.D04G160150 Gossypium hirsutum HOM05D008922 ORTHO05D010978 5.5e-39 164.9 92 87.0
Gohir.A12G138620 Gossypium hirsutum HOM05D008922 ORTHO05D010978 7.2e-39 164.5 83 92.8
Eucgr.J02736 Eucalyptus grandis HOM05D008922 ORTHO05D010978 4.7e-38 161.8 81 96.3
Migut.A01147 Erythranthe guttata HOM05D008922 ORTHO05D010978 3.0e-37 159.1 79 96.2
Gorai.007G083900 Gossypium raimondii HOM05D008922 ORTHO05D010978 8.9e-37 157.5 90 84.4
Gorai.005G093900 Gossypium raimondii HOM05D008922 ORTHO05D010978 1.7e-35 153.3 92 82.6
Gohir.D02G149550 Gossypium hirsutum HOM05D008922 ORTHO05D010978 4.9e-35 151.8 87 83.9
Oeu045555.1 Olea europaea HOM05D008922 ORTHO05D010978 8.3e-35 151.0 91 81.3
SEGI_05822 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 1.5e-28 130.2 89 71.9
Gorai.012G032000 Gossypium raimondii HOM05D008922 ORTHO05D010978 3.7e-27 125.6 83 78.3
SEGI_05748 Sequoiadendron giganteum HOM05D000216 ORTHO05D001131 5.4e-26 121.7 88 67.0
Gorai.011G182500 Gossypium raimondii HOM05D008922 ORTHO05D010978 8.6e-24 114.4 91 64.8
HanXRQChr13g0413491 Helianthus annuus HOM05D005034 ORTHO05D006234 8.0e-22 107.8 51 96.1
HanXRQChr12g0369781 Helianthus annuus HOM05D008922 ORTHO05D010978 4.0e-21 105.5 53 92.5
HPP92_028403 Vanilla planifolia HOM05D008922 ORTHO05D010978 9.8e-20 100.9 52 88.5
HPP92_028411 Vanilla planifolia HOM05D008922 ORTHO05D010978 9.8e-20 100.9 52 88.5
HPP92_028427 Vanilla planifolia HOM05D008922 ORTHO05D010978 9.8e-20 100.9 52 88.5
Oeu028750.1 Olea europaea HOM05D008922 ORTHO05D010978 1.4e-18 97.1 52 82.7
Medtr4g076920 Medicago truncatula HOM05D008922 ORTHO05D010978 4.1e-18 95.5 51 90.2
Oeu028760.1 Olea europaea HOM05D001387 ORTHO05D001250 1.2e-17 94.0 50 90.0
EL10As9g23921 Beta vulgaris HOM05D008922 ORTHO05D010978 7.8e-17 91.3 42 95.2
Sc15g0001780 Simmondsia chinensis HOM05D001387 ORTHO05D001250 1.2e-14 84.0 42 88.1
SGA_v2.0_scaffold477G52163 Striga asiatica HOM05D008922 ORTHO05D010978 2.8e-14 82.8 44 88.6
HanXRQChr00c0554g0575681 Helianthus annuus HOM05D008922 ORTHO05D010978 8.1e-14 81.3 40 90.0
Sopen01g027160 Solanum pennellii HOM05D008922 ORTHO05D010978 1.4e-13 80.5 37 94.6
arahy.Tifrunner.gnm1.ann1.9U8SPX Arachis hypogaea HOM05D008922 ORTHO05D010978 4.4e-12 75.5 74 58.1
Psat4g046840 Pisum sativum HOM05D008922 ORTHO05D010978 2.7e-09 66.2 41 73.2
HanXRQChr08g0235731 Helianthus annuus HOM05D000445 ORTHO05D010978 3.5e-09 65.9 81 45.7


User provided reference genes

Program Settings