Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc00g021640.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 1.5e-236 822.4 408 100.0
Nitab4.5_0010559g0050 Nicotiana tabacum HOM05D003517 ORTHO05D009798 4.9e-198 694.5 366 94.8
CAN.G110.13 Capsicum annuum HOM05D003517 ORTHO05D009798 5.9e-196 687.6 346 98.8
RcHm_v2.0_MTg0499001 Rosa chinensis HOM05D003517 ORTHO05D009798 4.0e-184 648.3 361 90.6
Lj2P1236T76 Lonicera japonica HOM05D003517 ORTHO05D009798 4.9e-182 641.3 352 91.8
Lalb_Chr00c24g0406771 Lupinus albus HOM05D003517 ORTHO05D009798 4.9e-174 614.8 350 89.4
LjContig00439g0008559 Lotus japonicus HOM05D003517 ORTHO05D009798 5.4e-173 611.3 347 89.9
Lj5g0015285 Lotus japonicus HOM05D003517 ORTHO05D009798 2.1e-172 609.4 347 89.6
Medtr0082s0030 Medicago truncatula HOM05D003517 ORTHO05D009798 6.0e-172 607.8 350 89.1
VMungo0985G0017 Vigna mungo HOM05D003517 ORTHO05D009798 4.4e-167 591.7 347 85.9
Nitab4.5_0003784g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.1e-164 582.8 385 80.0
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea HOM05D003517 ORTHO05D009798 8.7e-163 577.4 346 86.7
AT2G07734 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 7.1e-157 557.8 352 83.5
ATMG00290 Arabidopsis thaliana HOM05D003517 ORTHO05D009798 7.1e-157 557.8 352 83.5
A04p09560 Brassica napus HOM05D003517 ORTHO05D009798 2.7e-156 555.8 349 84.0
BolSC28t60322H Brassica oleracea HOM05D003517 ORTHO05D009798 2.7e-156 555.8 349 84.0
BraSC48t46302Z Brassica rapa HOM05D003517 ORTHO05D009798 2.7e-156 555.8 349 84.0
Thhalv10023100m.g Eutrema salsugineum HOM05D003517 ORTHO05D009798 4.6e-156 555.1 349 83.7
BraSC48t46288Z Brassica rapa HOM05D003517 ORTHO05D009798 2.1e-153 546.2 350 82.9
SGA_v2.0_scaffold420G51390 Striga asiatica HOM05D003517 ORTHO05D009798 3.6e-153 545.4 332 86.1
GSVIVG01006669001 Vitis vinifera HOM05D003517 ORTHO05D009798 1.5e-151 540.0 352 80.4
Nn1g10026 Nelumbo nucifera HOM05D003517 ORTHO05D009798 5.8e-143 511.5 277 91.0
Nn1g10028 Nelumbo nucifera HOM05D003517 ORTHO05D009798 5.8e-143 511.5 277 91.0
HanXRQChr16g0504301 Helianthus annuus HOM05D003517 ORTHO05D009798 1.7e-142 510.0 327 80.7
HanXRQMTg0579381 Helianthus annuus HOM05D003517 ORTHO05D009798 1.7e-142 510.0 327 80.7
DCAR_032455 Daucus carota HOM05D003517 ORTHO05D009798 2.1e-140 503.1 280 90.7
Peaxi162Scf00456g00032 Petunia axillaris HOM05D003517 ORTHO05D009794 6.7e-139 498.0 251 97.6
CsaV3_UNG208660 Cucumis sativus L. HOM05D003517 ORTHO05D009798 2.3e-131 473.0 277 84.8
SabraMtG0002700 Salix brachista HOM05D000890 ORTHO05D000697 6.3e-129 464.9 294 81.6
CAN.G85.23 Capsicum annuum HOM05D003517 ORTHO05D009798 2.6e-127 459.5 234 97.9
Ca_14831_v3 Cicer arietinum L. HOM05D003517 ORTHO05D009798 1.7e-126 456.8 257 89.1
Zm00001eb436030 Zea mays HOM05D003517 ORTHO05D009798 3.1e-120 436.0 287 77.0
Zm00001eb384400 Zea mays HOM05D003517 ORTHO05D009798 3.5e-111 406.0 248 82.7
Hma1.2p1_0020F.1_g014220 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 4.7e-108 395.6 219 91.3
CAN.G1109.3 Capsicum annuum HOM05D003517 ORTHO05D009798 6.7e-107 391.7 201 96.5
Lsat_1_v5_gn_7_67721 Lactuca sativa HOM05D003517 ORTHO05D009798 7.0e-104 381.7 255 78.0
Hma1.2p1_0020F.1_g014210 Hydrangea macrophylla HOM05D003517 ORTHO05D009798 9.1e-104 381.3 208 91.3
Sp3g25550 Schrenkiella parvula HOM05D003517 ORTHO05D009798 2.2e-102 376.7 337 64.4
MBI05_g23322_MAGBIO Magnolia biondii HOM05D003517 ORTHO05D009798 6.5e-102 375.2 225 84.0
Gorai.001G161800 Gossypium raimondii HOM05D003517 ORTHO05D009798 1.4e-99 367.5 390 56.9
Eucgr.C02512 Eucalyptus grandis HOM05D003517 ORTHO05D009798 1.8e-99 367.1 224 83.0
TPR.G20538 Trifolium pratense HOM05D003517 ORTHO05D009798 8.5e-94 348.2 197 89.8
Eucgr.H02717 Eucalyptus grandis HOM05D003517 ORTHO05D009798 8.3e-89 331.6 212 80.2
Zm00001eb438100 Zea mays HOM05D003517 ORTHO05D009798 5.9e-87 325.5 198 82.3
Zm00001eb438980 Zea mays HOM05D003517 ORTHO05D009798 5.9e-87 325.5 198 82.3
Zm00001eb439060 Zea mays HOM05D003517 ORTHO05D009798 5.9e-87 325.5 198 82.3
BolSC28t60424H Brassica oleracea HOM05D003517 ORTHO05D009798 2.1e-84 317.0 200 82.5
Lalb_Chr22g0353801 Lupinus albus HOM05D003517 ORTHO05D009798 2.6e-82 310.1 192 83.3
Nitab4.5_0000172g1110 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.6e-79 300.8 224 72.8
PGSC0003DMG400033608 Solanum tuberosum HOM05D003517 ORTHO05D009798 1.0e-78 298.1 145 100.0
EL10Ac7g18051 Beta vulgaris HOM05D003517 ORTHO05D009798 7.5e-74 282.0 215 68.8
TPR.G36113 Trifolium pratense HOM05D003517 ORTHO05D009798 1.7e-70 270.8 146 91.8
unitig_87.g28026 Utricularia gibba HOM05D003517 ORTHO05D009798 8.9e-67 258.5 197 71.1
HanXRQChr10g0310901 Helianthus annuus HOM05D003517 ORTHO05D009798 5.8e-66 255.8 163 80.4
Nitab4.5_0003945g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009798 4.1e-64 249.6 139 89.2
Solyc11g030940.3 Solanum lycopersicum HOM05D003517 ORTHO05D009798 1.2e-63 248.1 149 84.6
Nitab4.5_0003945g0070 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.0e-62 245.0 192 71.9
PSO063G7170 Papaver somniferum HOM05D003517 ORTHO05D009798 1.0e-62 245.0 253 55.3
Nitab4.5_0000172g2130 Nicotiana tabacum HOM05D003517 ORTHO05D009798 5.1e-62 242.7 135 88.1
PSO585G0042 Papaver somniferum HOM05D003517 ORTHO05D009798 5.1e-62 242.7 253 55.3
SHI35305 Sapria himalayana HOM05D003517 ORTHO05D009798 2.5e-61 240.4 173 74.0
SEGI_36410 Sequoiadendron giganteum HOM05D003517 ORTHO05D009798 1.1e-59 235.0 263 55.1
SGA_v2.0_scaffold648G53338 Striga asiatica HOM05D003517 ORTHO05D009798 2.1e-55 220.7 134 81.3
Nitab4.5_0001152g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.3e-54 218.0 130 82.3
Zm00001eb438110 Zea mays HOM05D003517 ORTHO05D009798 7.3e-53 212.2 152 71.7
Zm00001eb438970 Zea mays HOM05D003517 ORTHO05D009798 7.3e-53 212.2 152 71.7
Zm00001eb439050 Zea mays HOM05D003517 ORTHO05D009798 7.3e-53 212.2 152 71.7
Zm00001eb440630 Zea mays HOM05D003517 ORTHO05D009798 7.3e-53 212.2 152 71.7
Nitab4.5_0000172g2160 Nicotiana tabacum HOM05D003517 ORTHO05D009798 5.2e-51 206.1 124 82.3
Oeu013683.1 Olea europaea HOM05D003517 ORTHO05D009798 3.4e-50 203.4 173 64.7
BraSC48t46337Z Brassica rapa HOM05D003517 ORTHO05D009798 1.6e-47 194.5 147 75.5
Nitab4.5_0000172g1090 Nicotiana tabacum HOM05D003517 ORTHO05D009794 9.0e-43 178.7 137 67.9
Nn1g09918 Nelumbo nucifera HOM05D003517 ORTHO05D009798 1.1e-37 161.8 86 88.4
Solyc10g045740.2 Solanum lycopersicum HOM05D003517 ORTHO05D009798 3.3e-37 160.2 98 77.6
Aqoxy4G01626 Aquilegia oxysepala HOM05D003517 ORTHO05D005131 1.4e-35 154.8 150 60.0
Nitab4.5_0001152g0480 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.8e-35 154.5 180 49.4
Gohir.A13G071500 Gossypium hirsutum HOM05D003517 ORTHO05D009798 5.3e-35 152.9 100 78.0
TPR.G31549 Trifolium pratense HOM05D003517 ORTHO05D009798 2.0e-34 151.0 91 80.2
Nitab4.5_0001152g1080 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.6e-34 150.6 131 63.4
Nitab4.5_0001152g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009794 6.4e-33 146.0 108 72.2
HanXRQChr10g0302361 Helianthus annuus HOM05D003517 ORTHO05D009798 7.4e-29 132.5 110 61.8
Solyc11g030935.1 Solanum lycopersicum HOM05D003517 ORTHO05D009798 4.5e-26 123.2 98 69.4
CARHR287140 Cardamine hirsuta HOM05D003517 ORTHO05D009798 7.6e-26 122.5 80 80.0
Nitab4.5_0001127g0280 Nicotiana tabacum HOM05D003517 ORTHO05D009794 3.8e-25 120.2 62 93.5
Nitab4.5_0008059g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 1.6e-23 114.8 60 93.3
Nitab4.5_0010321g0030 Nicotiana tabacum HOM05D003517 ORTHO05D009798 7.9e-23 112.5 95 67.4
BraSC159t45733Z Brassica rapa HOM05D003517 ORTHO05D009798 2.8e-20 104.0 83 69.9
Nitab4.5_0000172g2150 Nicotiana tabacum HOM05D003517 ORTHO05D036924 1.1e-19 102.1 64 78.1
Lalb_Chr22g0353791 Lupinus albus HOM05D003517 ORTHO05D009798 1.8e-19 101.3 58 84.5
Dinv18903 Davidia involucrata HOM05D003517 ORTHO05D009798 9.0e-19 99.0 49 100.0
Nitab4.5_0000351g0300 Nicotiana tabacum HOM05D003517 ORTHO05D009798 6.5e-17 92.8 62 72.6
PSO513G0171 Papaver somniferum HOM05D003517 ORTHO05D009798 3.2e-16 90.5 96 51.0
PSO339G1469 Papaver somniferum HOM05D003517 ORTHO05D009798 5.5e-16 89.7 96 51.0
Nitab4.5_0001152g0970 Nicotiana tabacum HOM05D003517 ORTHO05D025894 7.9e-15 85.9 66 66.7
Medtr0030s0090 Medicago truncatula HOM05D003517 ORTHO05D009798 4.8e-12 76.6 36 97.2
Nitab4.5_0006196g0040 Nicotiana tabacum HOM05D003517 ORTHO05D009798 2.9e-09 67.4 42 81.0
Lj2g0009144 Lotus japonicus HOM05D000751 ORTHO05D000889 6.5e-09 66.2 37 81.1
CSS0018598 Camellia sinensis var. sinensis HOM05D002859 ORTHO05D003120 1.0e-06 58.9 42 66.7
Solyc11g030930.3 Solanum lycopersicum HOM05D003517 ORTHO05D009794 1.8e-06 58.2 31 83.9


User provided reference genes

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