Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0028122 Sechium edule HOM05D008280 ORTHO05D010492 6.5e-96 354.0 171 100.0
Sed0015016 Sechium edule HOM05D008280 ORTHO05D010492 4.1e-90 334.7 207 82.1
RcHm_v2.0_MTg0498291 Rosa chinensis HOM05D008280 ORTHO05D010492 8.8e-85 317.0 207 78.3
BNapus_Darmor_BZH_scaffold_234p00070 Brassica napus HOM05D008280 ORTHO05D010492 9.1e-82 307.0 207 77.3
BolSC28t60354H Brassica oleracea HOM05D008280 ORTHO05D010492 9.1e-82 307.0 207 77.3
BraSC159t45719Z Brassica rapa HOM05D008280 ORTHO05D010492 9.1e-82 307.0 207 77.3
BraSC77t46666Z Brassica rapa HOM05D008280 ORTHO05D010492 9.1e-82 307.0 207 77.3
CARHR282640 Cardamine hirsuta HOM05D008280 ORTHO05D010492 9.1e-82 307.0 207 77.3
Sp3g25740 Schrenkiella parvula HOM05D008280 ORTHO05D010492 9.1e-82 307.0 207 77.3
Medtr0141s0020 Medicago truncatula HOM05D008280 ORTHO05D010492 4.5e-81 304.7 207 74.9
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 7.7e-81 303.9 207 74.9
CAN.G1126.5 Capsicum annuum HOM05D008280 ORTHO05D010492 1.7e-80 302.8 207 76.8
CAN.G1159.15 Capsicum annuum HOM05D008280 ORTHO05D010492 1.7e-80 302.8 207 76.8
CAN.G266.10 Capsicum annuum HOM05D008280 ORTHO05D010492 1.7e-80 302.8 207 76.8
Solyc00g020040.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 1.7e-80 302.8 207 76.8
CANSAT16G0019 Cannabis sativa HOM05D008280 ORTHO05D010492 2.9e-80 302.0 207 76.8
Lj5g0023723 Lotus japonicus HOM05D008280 ORTHO05D010492 5.0e-80 301.2 207 74.9
LjContig00315g0024501 Lotus japonicus HOM05D008280 ORTHO05D010492 5.0e-80 301.2 207 74.9
ATMG00110 Arabidopsis thaliana HOM05D008280 ORTHO05D010492 6.6e-80 300.8 207 76.3
DCAR_032445 Daucus carota HOM05D008280 ORTHO05D010492 1.9e-79 299.3 207 75.8
Lj2P1227T101 Lonicera japonica HOM05D008280 ORTHO05D010492 3.3e-79 298.5 207 75.8
Nn1g10160 Nelumbo nucifera HOM05D008280 ORTHO05D010492 2.1e-78 295.8 207 74.4
HanXRQMTg0579251 Helianthus annuus HOM05D008280 ORTHO05D010492 2.8e-78 295.4 207 74.9
SalBow1G8376 Salvia bowleyana HOM05D008280 ORTHO05D010492 1.8e-77 292.7 207 74.9
Lalb_Chr00c29g0408141 Lupinus albus HOM05D008280 ORTHO05D010492 2.3e-77 292.4 207 72.5
Lsat_1_v5_gn_7_99841 Lactuca sativa HOM05D008280 ORTHO05D010492 5.2e-77 291.2 207 73.9
BraSC48t46257Z Brassica rapa HOM05D008280 ORTHO05D010492 7.5e-76 287.3 196 75.5
arahy.Tifrunner.gnm1.ann1.U3KMBF Arachis hypogaea HOM05D008280 ORTHO05D010492 9.8e-76 287.0 195 74.9
Potri.007G061721 Populus trichocarpa HOM05D008280 ORTHO05D010492 2.4e-74 282.3 207 74.4
CAN.G72.16 Capsicum annuum HOM05D008280 ORTHO05D010492 9.5e-71 270.4 207 70.0
Eucgr.E02151 Eucalyptus grandis HOM05D008280 ORTHO05D010492 1.5e-68 263.1 154 85.7
SHI07395 Sapria himalayana HOM05D008280 ORTHO05D010492 3.1e-61 238.8 163 75.5
CAN.G362.37 Capsicum annuum HOM05D008280 ORTHO05D010492 6.8e-61 237.7 207 65.2
Nitab4.5_0004471g0100 Nicotiana tabacum HOM05D008280 ORTHO05D010492 8.3e-59 230.7 169 75.1
Nitab4.5_0001796g0300 Nicotiana tabacum HOM05D008280 ORTHO05D010492 8.6e-56 220.7 207 61.8
arahy.Tifrunner.gnm1.ann1.9X0QWA Arachis hypogaea HOM05D008280 ORTHO05D010492 1.2e-54 216.9 160 70.0
Nitab4.5_0009703g0040 Nicotiana tabacum HOM05D008280 ORTHO05D010492 1.2e-54 216.9 161 68.9
arahy.Tifrunner.gnm1.ann1.TAQ3SD Arachis hypogaea HOM05D008280 ORTHO05D010492 6.2e-54 214.5 160 69.4
Nn7g37645 Nelumbo nucifera HOM05D008280 ORTHO05D010492 4.7e-46 188.3 100 90.0
MBI05_g23314_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 2.9e-43 179.1 144 67.4
HanXRQChr05g0151451 Helianthus annuus HOM05D008280 ORTHO05D010492 6.6e-40 167.9 96 85.4
TAR371G0473 Trochodendron aralioides HOM05D008280 ORTHO05D010492 3.6e-38 162.2 158 60.8
MBI09_g03548_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 4.4e-36 155.2 123 66.7
Solyc11g028160.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 2.9e-35 152.5 146 59.6
Medtr0094s0120 Medicago truncatula HOM05D008280 ORTHO05D010492 4.6e-33 145.2 148 54.1
CAN.G21.55 Capsicum annuum HOM05D008280 ORTHO05D010492 7.1e-26 121.3 114 60.5
CAN.G676.27 Capsicum annuum HOM05D008280 ORTHO05D010492 1.4e-18 97.1 104 54.8
unitig_87.g27971 Utricularia gibba HOM05D008280 ORTHO05D010492 9.3e-18 94.4 99 55.6
Solyc12g035890.3 Solanum lycopersicum HOM05D000964 ORTHO05D004047 7.9e-17 91.3 58 74.1
Lsat_1_v5_gn_7_96601 Lactuca sativa HOM05D008280 ORTHO05D010492 1.3e-16 90.5 99 54.5
HanXRQChr03g0087181 Helianthus annuus HOM05D008280 ORTHO05D010492 6.7e-16 88.2 99 53.5
Nitab4.5_0000978g0030 Nicotiana tabacum HOM05D008280 ORTHO05D010492 9.6e-15 84.3 91 53.8
Psat1g132520 Pisum sativum HOM05D008280 ORTHO05D010492 8.4e-11 71.2 87 51.7
Ca_30339_v3 Cicer arietinum L. HOM05D008280 ORTHO05D010492 4.6e-09 65.5 111 39.6
Lj2C1224T22 Lonicera japonica HOM05D008280 ORTHO05D010492 1.8e-08 63.5 47 70.2
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 8.7e-08 61.2 34 82.4


User provided reference genes

Program Settings