Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0028059 Sechium edule HOM05D005952 ORTHO05D007262 1.8e-171 606.3 315 100.0
MELO3C011875.2 Cucumis melo HOM05D005952 ORTHO05D007262 3.8e-145 518.8 313 87.2
CsaV3_5G030360 Cucumis sativus L. HOM05D005952 ORTHO05D007262 1.1e-144 517.3 313 86.6
ClCG11G013770 Citrullus lanatus HOM05D005952 ORTHO05D007262 1.4e-144 516.9 313 87.5
Manes.13G018200 Manihot esculenta HOM05D005952 ORTHO05D007262 1.7e-132 476.9 310 80.6
Gohir.A03G127000 Gossypium hirsutum HOM05D005952 ORTHO05D007262 8.2e-132 474.6 315 79.0
TWI75G1563 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 1.1e-131 474.2 309 80.3
Gohir.D02G150400 Gossypium hirsutum HOM05D005952 ORTHO05D007262 1.8e-131 473.4 315 78.7
Sed0012291 Sechium edule HOM05D005952 ORTHO05D007262 1.6e-130 470.3 310 80.6
Duzib251G0036 Durio zibethinus HOM05D005952 ORTHO05D007262 1.3e-129 467.2 311 79.4
CiPaw.06G101100 Carya illinoinensis HOM05D005952 ORTHO05D007262 2.9e-129 466.1 309 80.3
PGR102G2583 Punica granatum HOM05D005952 ORTHO05D007262 1.1e-128 464.2 319 76.8
Cfa009332 Carpinus fangiana HOM05D005952 ORTHO05D007262 1.5e-128 463.8 304 81.6
Gorai.005G168700 Gossypium raimondii HOM05D005952 ORTHO05D007262 1.9e-128 463.4 316 77.8
Ciclev10031923m.g Citrus clementina HOM05D005952 ORTHO05D007262 5.5e-128 461.8 315 78.4
Eucgr.B03481 Eucalyptus grandis HOM05D005952 ORTHO05D007262 7.2e-128 461.5 317 77.6
CANSAT01G2967 Cannabis sativa HOM05D005952 ORTHO05D007262 2.1e-127 459.9 317 76.7
Prupe.1G228700 Prunus persica HOM05D005952 ORTHO05D007262 4.7e-127 458.8 313 77.0
TAR622G0739 Trochodendron aralioides HOM05D005952 ORTHO05D007262 6.1e-127 458.4 306 78.4
arahy.Tifrunner.gnm1.ann1.19W7I6 Arachis hypogaea HOM05D005952 ORTHO05D007262 8.0e-127 458.0 308 78.6
Thecc.02G212400 Theobroma cacao HOM05D005952 ORTHO05D007262 8.0e-127 458.0 317 76.7
VMungo1383G3287 Vigna mungo HOM05D005952 ORTHO05D007262 4.0e-126 455.7 312 75.3
Nn3g16502 Nelumbo nucifera HOM05D005952 ORTHO05D007262 4.4e-125 452.2 316 76.9
COL.COLO4_20379 Corchorus olitorius HOM05D005952 ORTHO05D007262 5.7e-125 451.8 341 73.3
QL03p053757 Quercus lobata HOM05D005952 ORTHO05D007262 1.3e-124 450.7 312 76.9
Phvul.001G260500 Phaseolus vulgaris HOM05D005952 ORTHO05D007262 3.7e-124 449.1 314 74.8
Atru.chr11.2304 Acer truncatum HOM05D005952 ORTHO05D007262 8.2e-124 448.0 319 76.8
Aqoxy5G03416 Aquilegia oxysepala HOM05D005952 ORTHO05D007262 3.1e-123 446.0 295 78.3
MD16G1117500 Malus domestica HOM05D005952 ORTHO05D007262 3.1e-123 446.0 314 75.2
Haze_12392 Corylus avellana HOM05D005952 ORTHO05D007262 4.1e-123 445.7 343 72.0
Cpa.g.sc43.12 Carica papaya HOM05D005952 ORTHO05D007262 9.1e-123 444.5 341 71.0
Sabra10G0046500 Salix brachista HOM05D005952 ORTHO05D007262 3.5e-122 442.6 322 73.9
CSS0022532 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 5.9e-122 441.8 287 82.6
CSS0029993 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 5.9e-122 441.8 287 82.6
Potri.010G059100 Populus trichocarpa HOM05D005952 ORTHO05D007262 7.7e-122 441.4 317 74.8
Cc00_g13550 Coffea canephora HOM05D005952 ORTHO05D007262 1.3e-121 440.7 318 74.2
THA.LOC104825515 Tarenaya hassleriana HOM05D005952 ORTHO05D007262 1.3e-121 440.7 315 74.6
TWI36G0663 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 1.1e-120 437.6 279 80.6
Psat5g094800 Pisum sativum HOM05D005952 ORTHO05D007262 1.9e-120 436.8 295 75.6
Actinidia20698 Actinidia chinensis HOM05D005952 ORTHO05D007262 3.2e-120 436.0 283 79.2
Dinv14825 Davidia involucrata HOM05D005952 ORTHO05D007262 4.2e-120 435.6 304 77.3
Glyma.18G008100 Glycine max HOM05D005952 ORTHO05D007262 9.4e-120 434.5 311 74.3
Glyma.11G249200 Glycine max HOM05D005952 ORTHO05D007262 3.6e-119 432.6 314 73.2
MSTRG.7992 Avicennia marina HOM05D005952 ORTHO05D007262 8.8e-118 427.9 324 73.1
Nitab4.5_0000492g0130 Nicotiana tabacum HOM05D005952 ORTHO05D007262 8.8e-118 427.9 313 74.8
RcHm_v2.0_Chr4g0430621 Rosa chinensis HOM05D005952 ORTHO05D007262 8.8e-118 427.9 313 73.5
FAN07G2304 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.2e-117 427.6 318 73.0
Peaxi162Scf00518g00512 Petunia axillaris HOM05D005952 ORTHO05D007262 1.5e-117 427.2 321 72.3
Solyc12g035650.2 Solanum lycopersicum HOM05D005952 ORTHO05D007262 2.0e-117 426.8 320 73.8
Sopen12g015910 Solanum pennellii HOM05D005952 ORTHO05D007262 2.0e-117 426.8 320 73.8
CAN.G34.9 Capsicum annuum HOM05D005952 ORTHO05D007262 3.4e-117 426.0 318 73.3
FAN07G2604 Fragaria x ananassa HOM05D005952 ORTHO05D007262 7.5e-117 424.9 315 72.7
FAN24G3446 Fragaria x ananassa HOM05D005952 ORTHO05D007262 7.5e-117 424.9 315 72.7
Lj3A1066G68 Lonicera japonica HOM05D005952 ORTHO05D007262 1.7e-116 423.7 326 71.5
C03p73530 Brassica napus HOM05D005952 ORTHO05D007262 2.8e-116 422.9 311 72.3
CARHR026780 Cardamine hirsuta HOM05D005952 ORTHO05D007262 8.3e-116 421.4 314 70.7
Lj1g0012703 Lotus japonicus HOM05D005952 ORTHO05D007262 8.3e-116 421.4 305 73.4
GSVIVG01010442001 Vitis vinifera HOM05D005952 ORTHO05D007262 1.4e-115 420.6 263 82.1
AUR62024128 Chenopodium quinoa HOM05D005952 ORTHO05D007262 7.0e-115 418.3 324 70.7
Sp1g23460 Schrenkiella parvula HOM05D005952 ORTHO05D007262 7.0e-115 418.3 318 69.5
MBI11_g07451_MAGBIO Magnolia biondii HOM05D005952 ORTHO05D007262 9.1e-115 417.9 275 78.9
CDE02G4251 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 2.0e-114 416.8 303 72.6
EL10Ac6g13481 Beta vulgaris HOM05D005952 ORTHO05D007262 3.5e-114 416.0 327 70.0
Lalb_Chr12g0206321 Lupinus albus HOM05D005952 ORTHO05D007262 5.9e-114 415.2 291 75.3
HanXRQChr08g0207671 Helianthus annuus HOM05D005952 ORTHO05D007262 1.0e-113 414.5 318 70.4
BolC3t19647H Brassica oleracea HOM05D005952 ORTHO05D007262 1.7e-113 413.7 316 70.9
Sc04g0004640 Simmondsia chinensis HOM05D005952 ORTHO05D007262 2.9e-113 412.9 313 70.3
Lsat_1_v5_gn_8_149221 Lactuca sativa HOM05D005952 ORTHO05D007262 3.8e-113 412.5 318 70.1
Medtr3g085590 Medicago truncatula HOM05D005952 ORTHO05D007262 3.8e-113 412.5 308 71.8
Potri.008G176100 Populus trichocarpa HOM05D005952 ORTHO05D007262 5.0e-113 412.1 324 70.7
Migut.K00712 Erythranthe guttata HOM05D005952 ORTHO05D007262 6.6e-113 411.8 330 70.0
Nitab4.5_0002026g0100 Nicotiana tabacum HOM05D005952 ORTHO05D007262 6.6e-113 411.8 313 72.2
Ah.02g130720 Amaranthus hybridus HOM05D005952 ORTHO05D007262 8.6e-113 411.4 315 71.7
BcaC01g01637 Brassica carinata HOM05D005952 ORTHO05D007262 8.6e-113 411.4 316 70.6
BcaB03g12064 Brassica carinata HOM05D005952 ORTHO05D007262 1.5e-112 410.6 316 70.3
A08p26510 Brassica napus HOM05D005952 ORTHO05D007262 1.5e-112 410.6 314 70.7
Oeu036880.1 Olea europaea HOM05D005952 ORTHO05D007262 1.5e-112 410.6 353 67.7
BraA08t34603Z Brassica rapa HOM05D005952 ORTHO05D007262 1.9e-112 410.2 315 70.5
Hund06080 Selenicereus undatus HOM05D005952 ORTHO05D007262 4.2e-112 409.1 314 71.0
Aa31LG7G9800 Aethionema arabicum HOM05D005952 ORTHO05D007262 7.2e-112 408.3 313 69.6
AT1G24310 Arabidopsis thaliana HOM05D005952 ORTHO05D007262 9.5e-112 407.9 301 69.8
MD13G1116800 Malus domestica HOM05D005952 ORTHO05D007262 1.6e-111 407.1 263 79.5
AL1G40610 Arabidopsis lyrata HOM05D005952 ORTHO05D007262 1.4e-110 404.1 299 69.6
SGA_v2.0_scaffold9G04762 Striga asiatica HOM05D005952 ORTHO05D007262 1.8e-110 403.7 300 72.7
FAN03G3372 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.0e-110 402.9 325 69.2
FvH4_4g23970 Fragaria vesca HOM05D005952 ORTHO05D007262 4.0e-110 402.5 318 69.8
ATR0561G264 Amborella trichopoda HOM05D005952 ORTHO05D007262 4.9e-108 395.6 284 72.9
Rhsim12G0102200 Rhododendron simsii HOM05D005952 ORTHO05D007262 3.1e-107 392.9 364 62.4
Carub.0001s2576 Capsella rubella HOM05D005952 ORTHO05D007262 9.2e-107 391.3 316 66.1
ECA233G5976 Erigeron canadensis HOM05D005952 ORTHO05D007262 1.0e-105 387.9 313 67.1
arahy.Tifrunner.gnm1.ann1.2251QZ Arachis hypogaea HOM05D005952 ORTHO05D007262 2.9e-105 386.3 308 68.8
Ca_16474_v3 Cicer arietinum L. HOM05D005952 ORTHO05D007262 1.5e-101 374.0 240 79.6
PSO063G3255 Papaver somniferum HOM05D005952 ORTHO05D007262 9.8e-101 371.3 297 69.0
PSO782G2816 Papaver somniferum HOM05D005952 ORTHO05D007262 4.9e-100 369.0 298 68.5
FAN27G1928 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.4e-99 367.5 249 75.5
AUR62005599 Chenopodium quinoa HOM05D005952 ORTHO05D007262 2.0e-98 363.6 289 68.9
FAN21G1414 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.3e-97 360.1 249 75.1
Os07g0295400 Oryza sativa ssp. japonica HOM05D005952 ORTHO05D007262 1.9e-96 357.1 268 66.4
DCAR_031192 Daucus carota HOM05D005952 ORTHO05D007262 9.5e-96 354.8 241 75.9
Zm00001eb305390 Zea mays HOM05D005952 ORTHO05D007262 2.8e-95 353.2 269 65.8
SHI17953 Sapria himalayana HOM05D005952 ORTHO05D007262 1.5e-93 347.4 271 66.8
HPP92_023193 Vanilla planifolia HOM05D005952 ORTHO05D007262 7.5e-93 345.1 311 60.8
FAN04G2616 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.8e-87 326.6 231 74.5
Mapoly0010s0010 Marchantia polymorpha HOM05D005952 ORTHO05D007262 1.1e-86 324.7 272 61.4
CDE06G2258 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 1.4e-86 324.3 303 61.7
SEGI_29251 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 3.4e-85 319.7 269 61.0
Pp3c10_15930 Physcomitrium patens HOM05D005952 ORTHO05D007262 1.9e-83 313.9 306 55.9
Pp3c10_15937 Physcomitrium patens HOM05D005952 ORTHO05D007262 1.9e-83 313.9 306 55.9
Thhalv10008300m.g Eutrema salsugineum HOM05D005952 ORTHO05D007262 1.6e-82 310.8 211 74.4
SalBow2G2019 Salvia bowleyana HOM05D005952 ORTHO05D007262 1.7e-81 307.4 266 64.7
CBR_g21943 Chara braunii HOM05D005952 ORTHO05D007262 2.8e-79 300.1 301 55.1
TWI36G1659 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 9.9e-77 291.6 331 54.7
CBR_g39502 Chara braunii HOM05D005952 ORTHO05D007262 9.2e-75 285.0 318 51.9
AagrBONN_evm.TU.Sc2ySwM_362.1552 Anthoceros agrestis HOM05D005952 ORTHO05D007262 2.7e-74 283.5 263 54.8
FAN04G0683 Fragaria x ananassa HOM05D005952 ORTHO05D007262 9.9e-69 265.0 193 73.1
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 7.1e-67 258.8 196 67.9
Actinidia09658 Actinidia chinensis HOM05D005952 ORTHO05D007262 4.6e-66 256.1 271 57.6
Hma1.2p1_0668F.1_g200020 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 3.3e-64 250.0 170 79.4
Pp3c14_14130 Physcomitrium patens HOM05D005952 ORTHO05D007262 2.6e-53 213.8 187 58.3
FAN23G0106 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.1e-46 191.8 142 71.8
Hma1.2p1_0668F.1_g200040 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 4.2e-43 179.9 105 81.9
FAN04G0535 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.2e-29 135.2 116 65.5
SEGI_23869 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 8.5e-28 129.0 102 57.8
HanXRQChr03g0071651 Helianthus annuus HOM05D005952 ORTHO05D007262 1.9e-27 127.9 93 67.7
Migut.K01177 Erythranthe guttata HOM05D005952 ORTHO05D007262 3.6e-18 97.1 103 58.3
Oeu029609.1 Olea europaea HOM05D005952 ORTHO05D007262 3.0e-17 94.0 62 69.4
Cre12.g542950 Chlamydomonas reinhardtii HOM05D005952 ORTHO05D007262 3.9e-17 93.6 252 28.6
MCO04G375 Micromonas commoda HOM05D005952 ORTHO05D007262 1.5e-16 91.7 248 29.0
SEGI_30692 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 3.5e-13 80.5 115 41.7
BcaC03g16356 Brassica carinata HOM05D029489 ORTHO05D007262 1.8e-06 58.2 38 68.4
Cfa009352 Carpinus fangiana HOM05D005952 ORTHO05D007262 1.8e-06 58.2 53 66.0


User provided reference genes

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