Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0027316 Sechium edule HOM05D003727 ORTHO05D004731 1.0e-218 763.1 371 100.0
CsaV3_4G025780 Cucumis sativus L. HOM05D003727 ORTHO05D004731 6.4e-197 690.6 371 88.7
Sed0005057 Sechium edule HOM05D003727 ORTHO05D004731 1.1e-196 689.9 371 88.9
ClCG04G007480 Citrullus lanatus HOM05D003727 ORTHO05D004731 3.2e-196 688.3 371 88.7
CsaV3_3G015500 Cucumis sativus L. HOM05D003727 ORTHO05D004731 4.3e-193 677.9 371 86.8
ClCG05G006850 Citrullus lanatus HOM05D003727 ORTHO05D004731 2.1e-192 675.6 371 87.6
Duzib151G0200 Durio zibethinus HOM05D003727 ORTHO05D004731 6.4e-189 664.1 371 86.3
Thecc.04G312500 Theobroma cacao HOM05D003727 ORTHO05D004731 6.6e-186 654.1 371 84.6
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea HOM05D003727 ORTHO05D004731 2.1e-184 649.0 371 83.3
Gohir.A01G036300 Gossypium hirsutum HOM05D003727 ORTHO05D004731 1.1e-183 646.7 371 84.1
Cfa015726 Carpinus fangiana HOM05D003727 ORTHO05D004731 4.0e-183 644.8 371 83.0
Cpa.g.sc146.27 Carica papaya HOM05D003727 ORTHO05D004731 5.2e-183 644.4 372 83.9
GSVIVG01017684001 Vitis vinifera HOM05D003727 ORTHO05D004731 8.9e-183 643.7 371 83.3
CiPaw.01G129700 Carya illinoinensis HOM05D003727 ORTHO05D004731 1.2e-182 643.3 371 83.6
CANSAT78G0237 Cannabis sativa HOM05D003727 ORTHO05D004731 1.5e-182 642.9 366 84.4
Haze_00772 Corylus avellana HOM05D003727 ORTHO05D004731 1.5e-182 642.9 378 82.3
QL06p014168 Quercus lobata HOM05D003727 ORTHO05D004731 2.0e-182 642.5 372 83.3
Gohir.D01G023600 Gossypium hirsutum HOM05D003727 ORTHO05D004731 3.4e-182 641.7 371 83.6
Manes.03G211600 Manihot esculenta HOM05D003727 ORTHO05D004731 3.4e-182 641.7 371 82.5
Prupe.1G105800 Prunus persica HOM05D003727 ORTHO05D004731 4.4e-182 641.3 372 82.8
Glyma.15G188500 Glycine max HOM05D003727 ORTHO05D004731 7.6e-182 640.6 371 83.3
Potri.010G002000 Populus trichocarpa HOM05D003727 ORTHO05D004731 7.6e-182 640.6 371 83.3
Lj6g0008986 Lotus japonicus HOM05D003727 ORTHO05D004731 9.9e-182 640.2 371 81.9
PSO170G4280 Papaver somniferum HOM05D003727 ORTHO05D004731 1.3e-181 639.8 371 83.0
VMungo1309G1883 Vigna mungo HOM05D003727 ORTHO05D004731 1.3e-181 639.8 371 83.3
Gorai.002G032100 Gossypium raimondii HOM05D003727 ORTHO05D004731 1.7e-181 639.4 371 83.0
RcHm_v2.0_Chr4g0427421 Rosa chinensis HOM05D003727 ORTHO05D004731 2.2e-181 639.0 372 83.6
Glyma.09G079000 Glycine max HOM05D003727 ORTHO05D004731 2.9e-181 638.6 371 82.5
PSO357G0471 Papaver somniferum HOM05D003727 ORTHO05D004731 3.8e-181 638.3 371 82.7
Phvul.009G219900 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 8.4e-181 637.1 371 83.0
TWI73G0221 Tripterygium wilfordii HOM05D003727 ORTHO05D004731 1.1e-180 636.7 371 81.4
Sabra10G0001600 Salix brachista HOM05D003727 ORTHO05D004731 1.4e-180 636.3 371 83.3
FvH4_4g21480 Fragaria vesca HOM05D003727 ORTHO05D004731 1.9e-180 636.0 372 82.8
FAN12G0484 Fragaria x ananassa HOM05D003727 ORTHO05D004731 1.9e-180 636.0 372 82.8
Rhsim04G0248100 Rhododendron simsii HOM05D003727 ORTHO05D004731 1.2e-179 633.3 373 83.1
CSS0027704 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 4.6e-179 631.3 373 82.3
Gohir.A10G176400 Gossypium hirsutum HOM05D003727 ORTHO05D004731 6.0e-179 630.9 371 82.5
THA.LOC104798546 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 6.0e-179 630.9 372 82.0
THA.LOC104802717 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 6.0e-179 630.9 372 82.0
FAN17G0291 Fragaria x ananassa HOM05D003727 ORTHO05D004731 7.8e-179 630.6 372 82.3
MD13G1140800 Malus domestica HOM05D003727 ORTHO05D004731 7.8e-179 630.6 371 81.9
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea HOM05D003727 ORTHO05D004731 1.0e-178 630.2 410 75.4
Ciclev10005215m.g Citrus clementina HOM05D003727 ORTHO05D004731 1.0e-178 630.2 371 81.4
THA.LOC104818862 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 3.9e-178 628.2 372 80.6
Gohir.D10G183100 Gossypium hirsutum HOM05D003727 ORTHO05D004731 6.6e-178 627.5 371 81.9
Gorai.011G205200 Gossypium raimondii HOM05D003727 ORTHO05D004731 6.6e-178 627.5 371 81.9
PGR004G0380 Punica granatum HOM05D003727 ORTHO05D004731 6.6e-178 627.5 385 79.5
Ca_07250_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 2.5e-177 625.5 365 82.7
TPR.G15491 Trifolium pratense HOM05D003727 ORTHO05D004731 2.5e-177 625.5 365 82.5
AT3G06483 Arabidopsis thaliana HOM05D003727 ORTHO05D004731 4.3e-177 624.8 372 82.3
Carub.0003s0594 Capsella rubella HOM05D003727 ORTHO05D004731 4.3e-177 624.8 372 82.0
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla HOM05D003727 ORTHO05D004731 4.3e-177 624.8 371 81.1
MSTRG.21742 Avicennia marina HOM05D003727 ORTHO05D004731 7.3e-177 624.0 371 80.6
DCAR_023405 Daucus carota HOM05D003727 ORTHO05D004731 7.3e-177 624.0 371 80.3
Solyc01g057210.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 7.3e-177 624.0 374 81.0
Sp3g05430 Schrenkiella parvula HOM05D003727 ORTHO05D004731 9.6e-177 623.6 372 80.9
PGSC0003DMG400013068 Solanum tuberosum HOM05D003727 ORTHO05D004731 1.3e-176 623.2 374 81.0
C03p42180 Brassica napus HOM05D003727 ORTHO05D004731 1.6e-176 622.9 372 81.5
Aa31LG5G17020 Aethionema arabicum HOM05D003727 ORTHO05D004731 2.1e-176 622.5 372 79.8
Migut.N00003 Erythranthe guttata HOM05D003727 ORTHO05D004731 2.8e-176 622.1 361 82.5
BraA03t12649Z Brassica rapa HOM05D003727 ORTHO05D004731 3.6e-176 621.7 372 81.2
Sopen01g021750 Solanum pennellii HOM05D003727 ORTHO05D004731 3.6e-176 621.7 374 80.7
Aqoxy7G02168 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 4.8e-176 621.3 371 81.1
Thhalv10020969m.g Eutrema salsugineum HOM05D003727 ORTHO05D004731 4.8e-176 621.3 372 80.6
BolC3t16499H Brassica oleracea HOM05D003727 ORTHO05D004731 6.2e-176 620.9 372 81.2
CARHR081010 Cardamine hirsuta HOM05D003727 ORTHO05D004731 6.2e-176 620.9 372 81.7
HanXRQChr07g0194351 Helianthus annuus HOM05D003727 ORTHO05D004731 6.2e-176 620.9 372 79.6
Lalb_Chr23g0276061 Lupinus albus HOM05D003727 ORTHO05D004731 1.4e-175 619.8 371 80.3
COL.COLO4_34520 Corchorus olitorius HOM05D003727 ORTHO05D004731 1.8e-175 619.4 362 82.9
Lalb_Chr11g0073551 Lupinus albus HOM05D003727 ORTHO05D004731 2.4e-175 619.0 371 80.1
Psat3g179960 Pisum sativum HOM05D003727 ORTHO05D004731 3.1e-175 618.6 365 81.6
Medtr7g024460 Medicago truncatula HOM05D003727 ORTHO05D004731 5.3e-175 617.8 365 80.8
TPR.G39591 Trifolium pratense HOM05D003727 ORTHO05D004731 1.2e-174 616.7 371 80.1
THA.LOC104827107 Tarenaya hassleriana HOM05D003727 ORTHO05D004731 1.5e-174 616.3 370 81.1
CSS0023101 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 4.4e-174 614.8 375 79.5
Ca_02357_v3 Cicer arietinum L. HOM05D003727 ORTHO05D004731 4.4e-174 614.8 371 80.1
Phvul.009G220000 Phaseolus vulgaris HOM05D003727 ORTHO05D004731 4.4e-174 614.8 360 81.9
Nitab4.5_0001334g0060 Nicotiana tabacum HOM05D003727 ORTHO05D004731 5.8e-174 614.4 385 78.7
Oeu022704.1 Olea europaea HOM05D003727 ORTHO05D004731 5.8e-174 614.4 371 80.3
TAR365G0780 Trochodendron aralioides HOM05D003727 ORTHO05D004731 9.9e-174 613.6 371 81.7
Aqoxy5G02791 Aquilegia oxysepala HOM05D003727 ORTHO05D004731 2.2e-173 612.5 368 80.2
Cc03_g00160 Coffea canephora HOM05D003727 ORTHO05D004731 2.2e-173 612.5 371 80.9
Medtr2g045490 Medicago truncatula HOM05D003727 ORTHO05D004731 2.2e-173 612.5 371 79.2
BcaC05g30021 Brassica carinata HOM05D003727 ORTHO05D004731 1.1e-172 610.1 363 80.4
CAN.G179.19 Capsicum annuum HOM05D003727 ORTHO05D004731 3.2e-172 608.6 374 79.7
Nitab4.5_0004046g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 3.2e-172 608.6 374 79.9
Lsat_1_v5_gn_6_70560 Lactuca sativa HOM05D003727 ORTHO05D004731 9.3e-172 607.1 371 77.9
MBI18_g09643_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 9.3e-172 607.1 372 79.8
BcaC05g29821 Brassica carinata HOM05D003727 ORTHO05D004731 1.6e-171 606.3 363 79.9
A05p41540 Brassica napus HOM05D003727 ORTHO05D004731 1.6e-171 606.3 363 79.9
C05p60740 Brassica napus HOM05D003727 ORTHO05D004731 1.6e-171 606.3 363 79.9
BolC5t34734H Brassica oleracea HOM05D003727 ORTHO05D004731 1.6e-171 606.3 363 79.9
BraA05t22875Z Brassica rapa HOM05D003727 ORTHO05D004731 1.6e-171 606.3 363 79.9
Peaxi162Scf00126g01030 Petunia axillaris HOM05D003727 ORTHO05D004731 2.1e-171 605.9 374 79.1
Sc25g0002190 Simmondsia chinensis HOM05D003727 ORTHO05D004731 2.7e-171 605.5 398 75.6
A03p34710 Brassica napus HOM05D003727 ORTHO05D004731 1.0e-170 603.6 403 74.7
Atru.chr4.3143 Acer truncatum HOM05D003727 ORTHO05D004731 2.3e-170 602.4 359 81.1
Nitab4.5_0003998g0020 Nicotiana tabacum HOM05D003727 ORTHO05D004731 3.0e-170 602.1 370 78.6
Eucgr.H04122 Eucalyptus grandis HOM05D003727 ORTHO05D004731 1.9e-169 599.4 357 81.0
Actinidia18506 Actinidia chinensis HOM05D003727 ORTHO05D004731 2.5e-169 599.0 352 82.4
Hund12253 Selenicereus undatus HOM05D003727 ORTHO05D004731 2.5e-169 599.0 370 77.8
HanXRQChr05g0149271 Helianthus annuus HOM05D003727 ORTHO05D004731 4.3e-169 598.2 371 76.5
CiPaw.02G069500 Carya illinoinensis HOM05D003727 ORTHO05D004731 3.6e-168 595.1 351 81.5
EL10Ac3g06260 Beta vulgaris HOM05D003727 ORTHO05D004731 5.3e-167 591.3 371 77.9
Lj6A700T83 Lonicera japonica HOM05D003727 ORTHO05D004731 1.2e-166 590.1 371 76.8
unitig_699.g19980 Utricularia gibba HOM05D003727 ORTHO05D004731 2.0e-166 589.3 371 75.5
CAN.G484.91 Capsicum annuum HOM05D003727 ORTHO05D004731 4.5e-166 588.2 370 77.8
HPP92_001184 Vanilla planifolia HOM05D003727 ORTHO05D004731 4.9e-165 584.7 371 76.8
Peaxi162Scf00668g00119 Petunia axillaris HOM05D003727 ORTHO05D004731 2.4e-164 582.4 370 76.8
Nn3g21906 Nelumbo nucifera HOM05D003727 ORTHO05D004731 3.2e-164 582.0 372 77.7
vmacro08010 Vaccinium macrocarpon HOM05D003727 ORTHO05D004731 3.2e-164 582.0 371 78.2
Actinidia00296 Actinidia chinensis HOM05D003727 ORTHO05D004731 4.2e-164 581.6 372 78.5
Glyma.17G040500 Glycine max HOM05D003727 ORTHO05D004731 1.2e-163 580.1 363 77.7
Lj3A840G128 Lonicera japonica HOM05D003727 ORTHO05D004731 1.3e-162 576.6 369 77.0
GSVIVG01031319001 Vitis vinifera HOM05D003727 ORTHO05D004731 6.7e-162 574.3 373 75.3
PSO210G4254 Papaver somniferum HOM05D003727 ORTHO05D004731 1.1e-161 573.5 369 73.4
ATR0796G219 Amborella trichopoda HOM05D003727 ORTHO05D004731 1.5e-161 573.2 370 75.4
MBI19_g32733_MAGBIO Magnolia biondii HOM05D003727 ORTHO05D004731 1.9e-161 572.8 373 75.3
Psat1g017520 Pisum sativum HOM05D003727 ORTHO05D004731 2.5e-161 572.4 352 77.8
PSO761G0171 Papaver somniferum HOM05D003727 ORTHO05D004731 5.6e-161 571.2 369 73.4
SGA_v2.0_scaffold157G37383 Striga asiatica HOM05D003727 ORTHO05D004731 1.8e-159 566.2 434 66.6
VMungo1215G3329 Vigna mungo HOM05D003727 ORTHO05D004731 4.0e-159 565.1 361 77.6
Nitab4.5_0000895g0180 Nicotiana tabacum HOM05D003727 ORTHO05D004731 6.9e-159 564.3 352 77.8
Zm00001eb018000 Zea mays HOM05D003727 ORTHO05D004731 1.5e-158 563.1 365 73.4
ECA233G2414 Erigeron canadensis HOM05D003727 ORTHO05D004731 2.0e-158 562.8 371 73.3
SalBow8G0722 Salvia bowleyana HOM05D003727 ORTHO05D004731 4.5e-158 561.6 361 75.6
CDE02G0044 Ceratophyllum demersum HOM05D003727 ORTHO05D002799 1.0e-157 560.5 356 76.1
Solyc12g098930.3 Solanum lycopersicum HOM05D003727 ORTHO05D004731 1.0e-157 560.5 372 73.9
Sopen12g033680 Solanum pennellii HOM05D003727 ORTHO05D004731 2.2e-157 559.3 372 73.9
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea HOM05D003727 ORTHO05D004731 4.6e-155 551.6 368 72.6
Zm00001eb328730 Zea mays HOM05D003727 ORTHO05D004731 1.3e-154 550.1 365 72.1
Os07g0637300 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 6.7e-154 547.7 365 72.6
PGSC0003DMG400004685 Solanum tuberosum HOM05D003727 ORTHO05D004731 6.7e-154 547.7 372 72.6
AUR62002558 Chenopodium quinoa HOM05D003727 ORTHO05D004731 1.5e-153 546.6 352 75.6
Os03g0370000 Oryza sativa ssp. japonica HOM05D003727 ORTHO05D004731 1.3e-152 543.5 363 72.5
SMO115G0066 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 8.4e-149 530.8 371 67.7
SGA_v2.0_scaffold157G37388 Striga asiatica HOM05D003727 ORTHO05D004731 1.8e-146 523.1 374 69.8
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis HOM05D003727 ORTHO05D004731 3.9e-146 521.9 371 66.6
SHI00051 Sapria himalayana HOM05D003727 ORTHO05D004731 8.7e-146 520.8 397 69.0
Pp3c15_8270 Physcomitrium patens HOM05D003727 ORTHO05D004731 3.1e-143 512.3 371 66.0
Mapoly0183s0013 Marchantia polymorpha HOM05D003727 ORTHO05D004731 1.2e-142 510.4 372 65.9
Pp3c9_2880 Physcomitrium patens HOM05D003727 ORTHO05D004731 1.5e-142 510.0 373 65.4
MELO3C003205.2 Cucumis melo HOM05D003727 ORTHO05D004731 2.9e-141 505.8 281 86.5
CDE01G0062 Ceratophyllum demersum HOM05D003727 ORTHO05D004731 5.0e-141 505.0 362 66.0
MELO3C006749.2 Cucumis melo HOM05D003727 ORTHO05D004731 9.4e-140 500.7 281 85.1
CBR_g238 Chara braunii HOM05D003727 ORTHO05D004731 8.8e-138 494.2 371 64.2
Lj4g0016505 Lotus japonicus HOM05D003727 ORTHO05D004731 5.7e-137 491.5 373 66.5
SEGI_06820 Sequoiadendron giganteum HOM05D003727 ORTHO05D004731 7.4e-137 491.1 375 63.5
unitig_8.g2888 Utricularia gibba HOM05D003727 ORTHO05D004731 3.8e-133 478.8 359 65.5
ECA246G0694 Erigeron canadensis HOM05D003727 ORTHO05D004731 3.2e-132 475.7 326 72.7
Oeu037626.1 Olea europaea HOM05D003727 ORTHO05D004731 2.7e-131 472.6 289 78.9
Cre05.g241750 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 6.7e-130 468.0 370 61.6
Nn4g25394 Nelumbo nucifera HOM05D003727 ORTHO05D004731 4.4e-129 465.3 284 79.2
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 7.4e-129 464.5 365 67.1
AL3G17510 Arabidopsis lyrata HOM05D003727 ORTHO05D004731 4.8e-128 461.8 278 82.4
Dinv29512 Davidia involucrata HOM05D003727 ORTHO05D004731 7.0e-127 458.0 280 79.3
SGA_v2.0_scaffold64G22028 Striga asiatica HOM05D003727 ORTHO05D004731 1.7e-125 453.4 279 80.3
unitig_747.g21103 Utricularia gibba HOM05D003727 ORTHO05D004731 8.8e-122 441.0 328 66.8
MCO15G342 Micromonas commoda HOM05D003727 ORTHO05D004731 1.8e-119 433.3 387 55.8
SMO367G0119 Selaginella moellendorffii HOM05D003727 ORTHO05D004731 9.1e-119 431.0 367 56.1
Zm00001eb394190 Zea mays HOM05D003727 ORTHO05D004731 5.5e-116 421.8 273 72.9
Glyma.13G119800 Glycine max HOM05D003727 ORTHO05D004731 1.2e-113 414.1 276 74.3
PRCOL_00006564 Prasinoderma coloniale HOM05D003727 ORTHO05D004731 1.2e-113 414.1 402 52.5
Dinv18024 Davidia involucrata HOM05D003727 ORTHO05D004731 7.5e-113 411.4 241 83.8
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea HOM05D003727 ORTHO05D004731 1.7e-112 410.2 289 68.9
Cre06.g278451 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D004731 4.5e-110 402.1 370 53.5
Cc00_g15630 Coffea canephora HOM05D003727 ORTHO05D004731 6.2e-91 338.6 274 64.2
FAN07G0809 Fragaria x ananassa HOM05D003727 ORTHO05D004731 1.5e-89 334.0 199 80.4
AUR62029978 Chenopodium quinoa HOM05D003727 ORTHO05D004731 1.6e-86 323.9 200 77.5
CSS0050306 Camellia sinensis var. sinensis HOM05D003727 ORTHO05D004731 7.8e-86 321.6 198 77.8
MD16G1136800 Malus domestica HOM05D003727 ORTHO05D004731 8.6e-85 318.2 177 85.3
BcaC08g45280 Brassica carinata HOM05D003727 ORTHO05D004731 1.0e-69 268.1 172 76.2
vmacro06806 Vaccinium macrocarpon HOM05D003727 ORTHO05D426773 1.1e-55 221.5 266 51.1
PRCOL_00002805 Prasinoderma coloniale HOM05D003727 ORTHO05D034196 7.6e-49 198.7 361 33.0
Cre06.g252300 Chlamydomonas reinhardtii HOM05D003727 ORTHO05D034196 2.1e-46 190.7 452 29.4
Cfa023761 Carpinus fangiana HOM05D003727 ORTHO05D034196 9.0e-42 175.3 404 27.7
Zm00001eb392210 Zea mays HOM05D003727 ORTHO05D444991 2.0e-41 174.1 119 68.9
Glyma.14G127500 Glycine max HOM05D003727 ORTHO05D004731 5.8e-41 172.6 113 77.9
Zm00001eb394790 Zea mays HOM05D003727 ORTHO05D441672 1.0e-40 171.8 147 61.2
Zm00001eb400710 Zea mays HOM05D003727 ORTHO05D445430 4.9e-40 169.5 119 67.2
Lsat_1_v5_gn_5_23680 Lactuca sativa HOM05D003727 ORTHO05D231959 8.2e-35 152.1 115 63.5
Cfa027032 Carpinus fangiana HOM05D003727 ORTHO05D122316 6.9e-34 149.1 303 29.4
DCAR_023404 Daucus carota HOM05D002877 ORTHO05D003248 1.3e-29 134.8 84 71.4
VMungo0251G3273 Vigna mungo HOM05D003727 ORTHO05D000132 4.5e-09 66.6 49 73.5
vmacro06805 Vaccinium macrocarpon HOM05D003727 ORTHO05D426993 2.5e-07 60.8 68 47.1


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