Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 5.9e-257 891.0 685 100.0
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 5.6e-199 698.4 516 78.5
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 3.0e-168 596.3 418 83.3
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 1.8e-144 517.3 324 92.0
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 1.3e-131 474.6 498 60.6
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 8.9e-128 461.8 428 66.6
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 2.0e-127 460.7 460 62.6
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 4.1e-125 453.0 457 62.6
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 4.1e-125 453.0 413 67.6
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 4.6e-124 449.5 426 54.7
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 3.0e-123 446.8 435 61.6
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 8.6e-123 445.3 437 58.6
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.1e-122 444.9 352 73.9
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 1.9e-122 444.1 419 55.1
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 5.6e-122 442.6 437 62.7
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 9.5e-122 441.8 468 60.5
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 1.6e-121 441.0 352 73.0
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 6.2e-121 439.1 376 69.1
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 8.1e-121 438.7 505 57.4
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 5.8e-119 432.6 437 61.8
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 1.7e-118 431.0 519 57.0
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 2.2e-118 430.6 391 67.5
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 4.9e-118 429.5 352 72.2
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 2.4e-117 427.2 479 58.9
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 9.2e-117 425.2 504 56.3
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 3.5e-116 423.3 464 60.6
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 6.0e-116 422.5 464 59.5
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 1.3e-115 421.4 469 59.7
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 1.7e-115 421.0 512 55.3
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 3.0e-115 420.2 378 56.9
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 3.9e-115 419.9 492 55.7
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 5.1e-115 419.5 388 66.8
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 5.1e-115 419.5 492 55.7
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 8.6e-115 418.7 470 59.4
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 5.6e-114 416.0 416 62.0
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 5.6e-114 416.0 366 68.6
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 5.6e-114 416.0 467 54.8
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 9.6e-114 415.2 352 68.8
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 1.6e-113 414.5 363 71.1
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 2.8e-113 413.7 508 55.3
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 3.1e-112 410.2 369 68.0
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 1.5e-111 407.9 450 60.0
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 2.0e-111 407.5 352 70.2
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 2.0e-111 407.5 502 55.8
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 2.0e-111 407.5 375 65.9
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 2.6e-111 407.1 368 67.4
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 2.6e-111 407.1 424 61.6
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 3.4e-111 406.8 489 57.3
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 4.4e-111 406.4 352 69.6
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 5.8e-111 406.0 511 55.0
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 7.6e-111 405.6 432 59.7
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 1.7e-110 404.4 427 58.8
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 1.7e-110 404.4 440 55.9
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 6.4e-110 402.5 363 61.2
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 1.4e-109 401.4 476 56.3
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 1.9e-109 401.0 398 63.6
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.9e-109 401.0 521 53.7
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 2.4e-109 400.6 379 55.1
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 4.2e-109 399.8 401 63.3
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 4.2e-109 399.8 476 56.7
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 9.3e-109 398.7 348 63.2
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 9.3e-109 398.7 400 63.0
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 1.6e-108 397.9 516 53.7
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 3.5e-108 396.7 355 68.5
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 4.6e-108 396.4 436 59.6
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 1.3e-107 394.8 487 53.6
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 1.7e-107 394.4 394 61.4
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 3.0e-107 393.7 498 53.0
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 3.0e-107 393.7 436 59.4
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 3.0e-107 393.7 348 68.7
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 3.9e-107 393.3 487 53.4
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 6.6e-107 392.5 443 60.9
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 8.7e-107 392.1 353 69.4
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 3.3e-106 390.2 448 58.3
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 1.3e-105 388.3 450 58.7
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 1.3e-105 388.3 386 62.7
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 6.2e-105 386.0 381 52.8
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 1.4e-104 384.8 361 64.0
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 1.8e-104 384.4 416 59.9
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 5.3e-104 382.9 359 66.9
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 1.2e-103 381.7 316 72.5
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 2.6e-103 380.6 369 65.9
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.2e-102 377.5 534 51.7
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.2e-102 377.5 534 51.7
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 3.2e-101 373.6 413 59.1
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 3.2e-101 373.6 413 59.1
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 3.2e-101 373.6 433 56.8
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 3.5e-100 370.2 408 59.6
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 6.0e-100 369.4 406 59.1
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 1.0e-99 368.6 502 51.8
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 2.3e-99 367.5 413 58.8
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 3.9e-99 366.7 386 61.7
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 9.6e-98 362.1 386 61.1
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 1.6e-97 361.3 352 62.2
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 2.1e-97 360.9 342 62.9
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 4.8e-97 359.8 302 72.8
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 2.6e-95 354.0 316 69.0
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 3.4e-95 353.6 360 61.1
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 2.9e-94 350.5 326 67.2
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 4.2e-93 346.7 365 61.6
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 8.7e-91 339.0 360 60.3
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 1.4e-69 268.5 367 43.9
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 2.2e-62 244.6 184 63.6
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 2.1e-60 238.0 284 46.8
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 7.7e-55 219.5 201 56.2
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 4.8e-49 200.3 299 41.1
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 1.2e-44 185.7 375 42.9
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 5.7e-42 176.8 353 39.4
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 1.6e-31 142.1 234 55.1
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 2.0e-31 141.7 386 38.9
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 2.8e-20 104.8 132 38.6
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 1.3e-14 85.9 47 80.9
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 2.5e-13 81.6 128 38.3


User provided reference genes

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