Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0025649 Sechium edule HOM05D006687 ORTHO05D008379 1.3e-246 855.9 427 100.0
ClCG05G005070 Citrullus lanatus HOM05D006687 ORTHO05D008379 5.4e-208 727.6 403 90.8
MELO3C006520.2 Cucumis melo HOM05D006687 ORTHO05D008379 9.2e-208 726.9 403 90.6
CsaV3_3G013130 Cucumis sativus L. HOM05D006687 ORTHO05D008379 1.2e-207 726.5 403 90.6
Sed0004090 Sechium edule HOM05D006687 ORTHO05D008379 6.6e-198 694.1 403 86.8
CANSAT78G1673 Cannabis sativa HOM05D006687 ORTHO05D008379 8.2e-180 634.0 411 77.1
Prupe.1G016800 Prunus persica HOM05D006687 ORTHO05D008379 1.5e-178 629.8 407 77.6
RcHm_v2.0_Chr4g0415641 Rosa chinensis HOM05D006687 ORTHO05D008379 1.5e-178 629.8 406 78.6
MD16G1196600 Malus domestica HOM05D006687 ORTHO05D008379 4.5e-178 628.2 417 75.8
MD13G1196100 Malus domestica HOM05D006687 ORTHO05D008379 5.8e-178 627.9 410 77.6
FAN07G2338 Fragaria x ananassa HOM05D006687 ORTHO05D008379 3.2e-176 622.1 409 78.0
FAN22G0081 Fragaria x ananassa HOM05D006687 ORTHO05D008379 3.5e-175 618.6 409 76.8
FvH4_4g16100 Fragaria vesca HOM05D006687 ORTHO05D008379 4.6e-175 618.2 410 76.3
Aqoxy2G03421 Aquilegia oxysepala HOM05D006687 ORTHO05D008379 1.3e-174 616.7 410 76.3
Manes.15G030400 Manihot esculenta HOM05D006687 ORTHO05D008379 2.3e-174 615.9 410 76.1
FAN17G0837 Fragaria x ananassa HOM05D006687 ORTHO05D008379 3.9e-174 615.1 409 76.5
Nn1g02367 Nelumbo nucifera HOM05D006687 ORTHO05D008379 5.1e-174 614.8 409 76.0
PSO210G5270 Papaver somniferum HOM05D006687 ORTHO05D008379 3.3e-173 612.1 406 76.1
PSO761G0513 Papaver somniferum HOM05D006687 ORTHO05D008379 4.3e-173 611.7 406 75.9
TAR636G0889 Trochodendron aralioides HOM05D006687 ORTHO05D008379 2.8e-172 609.0 409 75.3
COL.COLO4_21511 Corchorus olitorius HOM05D006687 ORTHO05D008379 8.2e-172 607.4 412 74.3
Cpa.g.sc58.86 Carica papaya HOM05D006687 ORTHO05D008379 2.4e-171 605.9 417 72.4
FAN12G1590 Fragaria x ananassa HOM05D006687 ORTHO05D008379 2.4e-171 605.9 433 72.3
Thecc.04G234600 Theobroma cacao HOM05D006687 ORTHO05D008379 7.7e-170 600.9 412 74.3
Gohir.D02G039900 Gossypium hirsutum HOM05D006687 ORTHO05D008379 6.5e-169 597.8 412 73.3
Duzib052G0918 Durio zibethinus HOM05D006687 ORTHO05D008379 1.4e-168 596.7 412 73.3
Gorai.005G044200 Gossypium raimondii HOM05D006687 ORTHO05D008379 1.9e-168 596.3 412 73.1
Gohir.A02G033400 Gossypium hirsutum HOM05D006687 ORTHO05D008379 5.5e-168 594.7 412 72.3
CSS0001912 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 7.2e-168 594.3 405 73.1
CSS0011956 Camellia sinensis var. sinensis HOM05D006687 ORTHO05D008379 2.7e-167 592.4 405 72.8
Atru.chr4.2438 Acer truncatum HOM05D006687 ORTHO05D008379 3.6e-167 592.0 413 72.4
TWI53G1185 Tripterygium wilfordii HOM05D006687 ORTHO05D008379 1.8e-166 589.7 411 72.5
Dinv44552 Davidia involucrata HOM05D006687 ORTHO05D008379 3.0e-166 589.0 407 72.5
CiPaw.01G168400 Carya illinoinensis HOM05D006687 ORTHO05D008379 3.9e-166 588.6 415 73.7
Actinidia23525 Actinidia chinensis HOM05D006687 ORTHO05D008379 1.9e-165 586.3 403 72.2
CDE05G2168 Ceratophyllum demersum HOM05D006687 ORTHO05D008379 1.9e-165 586.3 414 72.7
Haze_00870 Corylus avellana HOM05D006687 ORTHO05D008379 5.7e-165 584.7 420 72.6
LjContig00222g0006058 Lotus japonicus HOM05D006687 ORTHO05D008379 1.7e-164 583.2 396 73.5
Potri.010G085500 Populus trichocarpa HOM05D006687 ORTHO05D008379 2.4e-163 579.3 403 72.7
THA.LOC104808559 Tarenaya hassleriana HOM05D006687 ORTHO05D008379 1.2e-162 577.0 409 70.2
Sabra08G0118100 Salix brachista HOM05D006687 ORTHO05D008379 2.0e-162 576.2 403 72.5
PGR004G1051 Punica granatum HOM05D006687 ORTHO05D008379 2.2e-161 572.8 405 72.3
arahy.Tifrunner.gnm1.ann1.S3TICT Arachis hypogaea HOM05D006687 ORTHO05D008379 2.9e-161 572.4 414 70.5
arahy.Tifrunner.gnm1.ann1.SVC7LK Arachis hypogaea HOM05D006687 ORTHO05D008379 5.0e-161 571.6 413 70.9
Lalb_Chr05g0211161 Lupinus albus HOM05D006687 ORTHO05D008379 3.2e-160 568.9 396 72.0
Glyma.11G008100 Glycine max HOM05D006687 ORTHO05D008379 2.1e-159 566.2 400 72.2
Sc13g0004520 Simmondsia chinensis HOM05D006687 ORTHO05D008379 2.1e-159 566.2 416 70.0
Aa31LG8G9120 Aethionema arabicum HOM05D006687 ORTHO05D008379 1.4e-158 563.5 409 68.9
Phvul.002G042300 Phaseolus vulgaris HOM05D006687 ORTHO05D008379 1.4e-158 563.5 397 71.5
VMungo1215G0895 Vigna mungo HOM05D006687 ORTHO05D008379 3.9e-158 562.0 402 71.6
Carub.0003s2274 Capsella rubella HOM05D006687 ORTHO05D008379 6.7e-158 561.2 409 67.5
Sp3g20360 Schrenkiella parvula HOM05D006687 ORTHO05D008379 1.7e-156 556.6 409 68.0
AT3G22590 Arabidopsis thaliana HOM05D006687 ORTHO05D008379 2.8e-156 555.8 411 67.2
Thhalv10020820m.g Eutrema salsugineum HOM05D006687 ORTHO05D008379 2.8e-156 555.8 409 68.0
CARHR098480 Cardamine hirsuta HOM05D006687 ORTHO05D008379 4.8e-156 555.1 411 67.6
AL3G36890 Arabidopsis lyrata HOM05D006687 ORTHO05D008379 2.4e-155 552.7 409 67.0
QL06p001782 Quercus lobata HOM05D006687 ORTHO05D008379 5.3e-155 551.6 413 69.2
Ciclev10005124m.g Citrus clementina HOM05D006687 ORTHO05D008379 9.1e-155 550.8 404 69.3
BcaC05g28033 Brassica carinata HOM05D006687 ORTHO05D008379 8.5e-153 544.3 407 67.6
C05p40480 Brassica napus HOM05D006687 ORTHO05D008379 8.5e-153 544.3 407 67.6
BolC5t32790H Brassica oleracea HOM05D006687 ORTHO05D008379 8.5e-153 544.3 407 67.6
Psat2g189880 Pisum sativum HOM05D006687 ORTHO05D008379 2.5e-152 542.7 399 69.4
BcaB06g26371 Brassica carinata HOM05D006687 ORTHO05D008379 4.2e-152 542.0 409 67.2
TPR.G37926 Trifolium pratense HOM05D006687 ORTHO05D008379 9.4e-152 540.8 399 70.4
BraA05t21491Z Brassica rapa HOM05D006687 ORTHO05D008379 2.7e-151 539.3 411 66.9
A05p26080 Brassica napus HOM05D006687 ORTHO05D008379 4.7e-151 538.5 411 66.7
Hund10579 Selenicereus undatus HOM05D006687 ORTHO05D008379 8.8e-150 534.3 411 65.9
Ca_24424_v3 Cicer arietinum L. HOM05D006687 ORTHO05D008379 3.3e-149 532.3 402 68.4
Nitab4.5_0000321g0170 Nicotiana tabacum HOM05D006687 ORTHO05D008379 9.7e-149 530.8 398 67.8
Lj3A732T77 Lonicera japonica HOM05D006687 ORTHO05D008379 2.2e-148 529.6 408 66.7
Medtr5g006960 Medicago truncatula HOM05D006687 ORTHO05D008379 3.7e-148 528.9 402 68.7
CAN.G231.10 Capsicum annuum HOM05D006687 ORTHO05D008379 4.8e-148 528.5 402 66.9
Lsat_1_v5_gn_6_103081 Lactuca sativa HOM05D006687 ORTHO05D008379 1.5e-144 516.9 404 66.8
Hma1.2p1_1572F.1_g291370 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 2.1e-143 513.1 399 66.2
AUR62034718 Chenopodium quinoa HOM05D006687 ORTHO05D008379 1.0e-142 510.8 411 62.8
PGSC0003DMG400016264 Solanum tuberosum HOM05D006687 ORTHO05D008379 2.3e-142 509.6 401 66.1
AUR62033670 Chenopodium quinoa HOM05D006687 ORTHO05D008379 3.0e-142 509.2 411 62.5
Solyc06g054080.3 Solanum lycopersicum HOM05D006687 ORTHO05D008379 4.0e-142 508.8 401 65.8
Sopen06g019240 Solanum pennellii HOM05D006687 ORTHO05D008379 4.0e-142 508.8 401 65.8
ECA246G3355 Erigeron canadensis HOM05D006687 ORTHO05D008379 2.0e-141 506.5 405 65.7
Ah.13g071710 Amaranthus hybridus HOM05D006687 ORTHO05D008379 4.4e-141 505.4 404 63.1
EL10Ac3g06489 Beta vulgaris HOM05D006687 ORTHO05D008379 4.1e-139 498.8 408 63.5
DCAR_024171 Daucus carota HOM05D006687 ORTHO05D008379 1.6e-138 496.9 376 67.6
Oeu042805.1 Olea europaea HOM05D006687 ORTHO05D008379 3.5e-138 495.7 403 65.3
HanXRQChr11g0327791 Helianthus annuus HOM05D006687 ORTHO05D008379 4.5e-138 495.4 420 64.0
SGA_v2.0_scaffold191G40505 Striga asiatica HOM05D006687 ORTHO05D008379 8.5e-137 491.1 406 64.8
SalBow2G2000 Salvia bowleyana HOM05D006687 ORTHO05D008379 3.2e-136 489.2 401 65.8
Actinidia40137 Actinidia chinensis HOM05D006687 ORTHO05D008379 3.6e-135 485.7 401 64.8
Migut.G00354 Erythranthe guttata HOM05D006687 ORTHO05D008379 6.1e-135 485.0 411 63.3
GSVIVG01018007001 Vitis vinifera HOM05D006687 ORTHO05D008379 3.0e-134 482.6 396 65.2
Peaxi162Scf00131g00127 Petunia axillaris HOM05D006687 ORTHO05D008379 2.0e-130 469.9 390 63.3
Sc13g0006070 Simmondsia chinensis HOM05D006687 ORTHO05D008379 4.5e-130 468.8 363 67.2
ATR0665G006 Amborella trichopoda HOM05D006687 ORTHO05D008379 2.9e-129 466.1 473 55.6
unitig_749.g14072 Utricularia gibba HOM05D006687 ORTHO05D008379 1.4e-123 447.2 404 60.9
Cc03_g04010 Coffea canephora HOM05D006687 ORTHO05D008379 3.3e-120 436.0 398 60.1
Eucgr.H03443 Eucalyptus grandis HOM05D006687 ORTHO05D008379 1.5e-112 410.6 253 81.4
SEGI_38182 Sequoiadendron giganteum HOM05D006687 ORTHO05D008379 2.1e-111 406.8 461 49.2
Potri.008G155000 Populus trichocarpa HOM05D006687 ORTHO05D008379 1.2e-106 391.0 252 79.8
Rhsim04G0200900 Rhododendron simsii HOM05D006687 ORTHO05D008379 1.2e-103 380.9 268 72.8
HPP92_018620 Vanilla planifolia HOM05D006687 ORTHO05D008379 2.9e-100 369.8 236 79.7
Hma1.2p1_1572F.1_g291380 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 3.3e-96 356.3 289 66.1
Zm00001eb217880 Zea mays HOM05D006687 ORTHO05D008379 2.8e-95 353.2 402 49.5
Mapoly0001s0040 Marchantia polymorpha HOM05D006687 ORTHO05D008379 3.8e-92 342.8 465 43.2
Hma1.2p1_2201F.1_g317030 Hydrangea macrophylla HOM05D006687 ORTHO05D008379 2.4e-91 340.1 254 70.5
Os03g0664700 Oryza sativa ssp. japonica HOM05D006687 ORTHO05D008379 4.2e-91 339.3 406 48.5
Pp3c6_19770 Physcomitrium patens HOM05D006687 ORTHO05D008379 2.4e-86 323.6 469 42.0
AagrBONN_evm.TU.Sc2ySwM_344.3801 Anthoceros agrestis HOM05D006687 ORTHO05D008379 7.6e-77 292.0 425 41.2
Dinv14009 Davidia involucrata HOM05D006687 ORTHO05D008379 7.6e-77 292.0 284 57.0
TAR365G0539 Trochodendron aralioides HOM05D006687 ORTHO05D008379 2.6e-69 266.9 184 76.1
CBR_g48312 Chara braunii HOM05D006687 ORTHO05D008379 6.1e-42 176.0 161 50.9
Oeu042804.1 Olea europaea HOM05D006687 ORTHO05D008379 7.0e-38 162.5 172 50.6
MCO02G458 Micromonas commoda HOM05D006687 ORTHO05D008379 5.9e-37 159.5 452 29.4
PRCOL_00002517 Prasinoderma coloniale HOM05D006687 ORTHO05D008379 2.9e-36 157.1 468 27.4
Cre02.g104550 Chlamydomonas reinhardtii HOM05D006687 ORTHO05D008379 9.4e-35 152.1 488 25.4
Dinv10241 Davidia involucrata HOM05D006687 ORTHO05D008379 4.8e-31 139.8 184 46.7
Rhsim04G0201000 Rhododendron simsii HOM05D001311 ORTHO05D001204 8.2e-31 139.0 111 58.6
MD09G1133500 Malus domestica HOM05D006687 ORTHO05D008379 9.8e-24 115.5 98 61.2
MD13G1132600 Malus domestica HOM05D006687 ORTHO05D008379 1.7e-23 114.8 70 80.0
HanXRQChr12g0381471 Helianthus annuus HOM05D006687 ORTHO05D008379 2.2e-23 114.4 108 53.7
vmacro02845 Vaccinium macrocarpon HOM05D006687 ORTHO05D008379 5.9e-13 79.7 125 40.0


User provided reference genes

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