Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0024483 Sechium edule HOM05D004811 ORTHO05D006888 1.0e-143 513.5 273 100.0
CsaV3_4G031660 Cucumis sativus L. HOM05D004811 ORTHO05D006888 2.1e-120 436.0 279 84.6
Sed0008285 Sechium edule HOM05D004811 ORTHO05D006888 7.7e-115 417.5 281 83.6
ClCG04G004820 Citrullus lanatus HOM05D004811 ORTHO05D006888 2.3e-103 379.4 284 76.8
CiPaw.16G007200 Carya illinoinensis HOM05D004811 ORTHO05D006888 6.3e-85 318.2 290 63.1
Haze_17831 Corylus avellana HOM05D004811 ORTHO05D006888 2.0e-83 313.2 290 63.1
Haze_17837 Corylus avellana HOM05D004811 ORTHO05D006888 2.0e-83 313.2 290 63.1
Cfa018260 Carpinus fangiana HOM05D004811 ORTHO05D006888 3.5e-83 312.4 290 63.8
Atru.chr1.2074 Acer truncatum HOM05D004811 ORTHO05D006888 5.9e-83 311.6 282 61.7
Prupe.1G353000 Prunus persica HOM05D004811 ORTHO05D006888 2.3e-79 299.7 283 61.8
Dinv04542 Davidia involucrata HOM05D004811 ORTHO05D006888 5.2e-79 298.5 278 62.9
MELO3C008873.2 Cucumis melo HOM05D004811 ORTHO05D006888 1.5e-78 297.0 280 63.9
GSVIVG01032296001 Vitis vinifera HOM05D004811 ORTHO05D006888 3.4e-78 295.8 283 60.1
Thecc.10G126600 Theobroma cacao HOM05D004811 ORTHO05D006888 7.5e-78 294.7 282 60.6
Lj2g0018835 Lotus japonicus HOM05D004811 ORTHO05D006888 1.7e-77 293.5 274 59.9
Actinidia00514 Actinidia chinensis HOM05D004811 ORTHO05D006888 3.7e-77 292.4 277 59.6
RcHm_v2.0_Chr7g0218051 Rosa chinensis HOM05D004811 ORTHO05D006888 4.9e-77 292.0 287 63.1
Manes.14G160925 Manihot esculenta HOM05D004811 ORTHO05D006888 1.8e-76 290.0 281 60.9
Duzib106G1219 Durio zibethinus HOM05D004811 ORTHO05D006888 4.5e-75 285.4 295 55.9
FAN04G3268 Fragaria x ananassa HOM05D004811 ORTHO05D006888 5.9e-75 285.0 279 59.5
PGR044G1247 Punica granatum HOM05D004811 ORTHO05D006888 5.9e-75 285.0 281 59.4
Ciclev10011123m.g Citrus clementina HOM05D004811 ORTHO05D006888 7.8e-75 284.6 284 59.9
FvH4_5g27050 Fragaria vesca HOM05D004811 ORTHO05D006888 1.7e-74 283.5 280 60.7
TWI18G0824 Tripterygium wilfordii HOM05D004811 ORTHO05D006888 2.3e-74 283.1 280 60.4
FAN18G4560 Fragaria x ananassa HOM05D004811 ORTHO05D006888 2.9e-74 282.7 280 61.1
TAR636G1158 Trochodendron aralioides HOM05D004811 ORTHO05D006888 6.6e-74 281.6 289 59.2
Phvul.004G051000 Phaseolus vulgaris HOM05D004811 ORTHO05D006888 8.6e-74 281.2 283 58.0
Medtr6g026900 Medicago truncatula HOM05D004811 ORTHO05D006888 1.5e-73 280.4 273 57.5
Rhsim11G0174100 Rhododendron simsii HOM05D004811 ORTHO05D006888 1.5e-73 280.4 281 58.0
COL.COLO4_04346 Corchorus olitorius HOM05D004811 ORTHO05D006888 3.3e-73 279.3 278 59.4
FAN08G1445 Fragaria x ananassa HOM05D004811 ORTHO05D006888 4.3e-73 278.9 292 58.2
Psat1g085480 Pisum sativum HOM05D004811 ORTHO05D006888 7.3e-73 278.1 274 56.9
Ca_04451_v3 Cicer arietinum L. HOM05D004811 ORTHO05D006888 1.2e-72 277.3 277 58.8
Lj5C205G23 Lonicera japonica HOM05D004811 ORTHO05D006888 2.8e-72 276.2 276 57.6
Lalb_Chr06g0174221 Lupinus albus HOM05D004811 ORTHO05D006888 2.8e-72 276.2 279 57.3
VMungo0464G0703 Vigna mungo HOM05D004811 ORTHO05D006888 4.7e-72 275.4 284 56.7
FAN13G1880 Fragaria x ananassa HOM05D004811 ORTHO05D006888 6.1e-72 275.0 281 60.1
Gohir.A06G170700 Gossypium hirsutum HOM05D004811 ORTHO05D006888 8.0e-72 274.6 294 53.7
Gohir.D06G178500 Gossypium hirsutum HOM05D004811 ORTHO05D006888 8.0e-72 274.6 294 53.7
Gorai.N006700 Gossypium raimondii HOM05D004811 ORTHO05D006888 2.3e-71 273.1 294 53.7
Eucgr.K03557 Eucalyptus grandis HOM05D004811 ORTHO05D006888 8.9e-71 271.2 282 58.5
vmacro10447 Vaccinium macrocarpon HOM05D004811 ORTHO05D006888 1.3e-69 267.3 277 58.8
Glyma.19G064500 Glycine max HOM05D004811 ORTHO05D006888 3.7e-69 265.8 288 56.2
Peaxi162Scf00003g01938 Petunia axillaris HOM05D004811 ORTHO05D006888 6.4e-69 265.0 278 55.4
arahy.Tifrunner.gnm1.ann1.BVJW9Q Arachis hypogaea HOM05D004811 ORTHO05D006888 8.3e-69 264.6 282 55.7
Nitab4.5_0000876g0200 Nicotiana tabacum HOM05D004811 ORTHO05D006888 8.3e-69 264.6 278 56.8
arahy.Tifrunner.gnm1.ann1.21VBB5 Arachis hypogaea HOM05D004811 ORTHO05D006888 1.9e-68 263.5 283 54.4
Sabra03G0073000 Salix brachista HOM05D004811 ORTHO05D006888 2.4e-68 263.1 281 57.3
DCAR_022066 Daucus carota HOM05D004811 ORTHO05D006888 7.0e-68 261.5 278 54.3
MBI19_g06604_MAGBIO Magnolia biondii HOM05D004811 ORTHO05D006888 9.2e-68 261.2 288 55.6
CSS0026504 Camellia sinensis var. sinensis HOM05D004811 ORTHO05D006888 2.7e-67 259.6 253 60.5
Aqoxy1G00017 Aquilegia oxysepala HOM05D004811 ORTHO05D006888 7.8e-67 258.1 287 54.0
Nn4g25146 Nelumbo nucifera HOM05D004811 ORTHO05D006888 1.0e-66 257.7 283 54.4
Nitab4.5_0016907g0010 Nicotiana tabacum HOM05D004811 ORTHO05D006888 1.0e-66 257.7 280 55.4
QL02p036387 Quercus lobata HOM05D004811 ORTHO05D006888 1.0e-66 257.7 241 63.9
QL02p036851 Quercus lobata HOM05D004811 ORTHO05D006888 1.0e-66 257.7 241 63.9
PSO339G3970 Papaver somniferum HOM05D004811 ORTHO05D006888 1.3e-66 257.3 287 53.3
Potri.003G106200 Populus trichocarpa HOM05D004811 ORTHO05D006888 1.3e-66 257.3 281 57.3
Cc02_g18400 Coffea canephora HOM05D004811 ORTHO05D006888 5.6e-65 251.9 276 55.1
PSO384G3007 Papaver somniferum HOM05D004811 ORTHO05D006888 3.6e-64 249.2 289 51.9
EL10Ac5g11622 Beta vulgaris HOM05D004811 ORTHO05D006888 1.4e-63 247.3 276 55.4
THA.LOC104812205 Tarenaya hassleriana HOM05D004811 ORTHO05D006888 5.2e-63 245.4 282 54.3
Sopen10g022210 Solanum pennellii HOM05D004811 ORTHO05D006888 1.3e-61 240.7 280 52.9
Solyc10g050540.2 Solanum lycopersicum HOM05D004811 ORTHO05D006888 2.2e-61 240.0 280 52.9
Oeu013671.1 Olea europaea HOM05D004811 ORTHO05D006888 1.1e-60 237.7 293 50.9
Psat2g043000 Pisum sativum HOM05D004811 ORTHO05D006888 1.1e-60 237.7 273 49.8
AUR62036481 Chenopodium quinoa HOM05D004811 ORTHO05D006888 1.9e-60 236.9 276 52.5
Sc16g0003300 Simmondsia chinensis HOM05D004811 ORTHO05D006888 1.9e-60 236.9 281 53.7
MSTRG.5372 Avicennia marina HOM05D004811 ORTHO05D006888 1.6e-59 233.8 279 51.6
C08p18170 Brassica napus HOM05D004811 ORTHO05D006888 1.7e-58 230.3 284 51.8
BolC8t49451H Brassica oleracea HOM05D004811 ORTHO05D006888 1.7e-58 230.3 284 51.8
Sp1g15840 Schrenkiella parvula HOM05D004811 ORTHO05D006888 5.1e-58 228.8 285 52.6
Ah.02g115100 Amaranthus hybridus HOM05D004811 ORTHO05D006888 8.6e-58 228.0 275 49.1
Aa31LG10G8540 Aethionema arabicum HOM05D004811 ORTHO05D006888 1.9e-57 226.9 282 49.3
A08p30750 Brassica napus HOM05D004811 ORTHO05D006888 2.5e-57 226.5 284 50.7
BraA08t35006Z Brassica rapa HOM05D004811 ORTHO05D006888 2.5e-57 226.5 284 50.7
AL1G30120 Arabidopsis lyrata HOM05D004811 ORTHO05D006888 7.3e-57 224.9 284 51.8
Carub.0001s1749 Capsella rubella HOM05D004811 ORTHO05D006888 1.2e-56 224.2 284 50.4
AUR62037093 Chenopodium quinoa HOM05D004811 ORTHO05D006888 2.3e-55 219.9 292 48.3
AT1G17760 Arabidopsis thaliana HOM05D004811 ORTHO05D006888 4.0e-55 219.2 284 51.8
vmacro02132 Vaccinium macrocarpon HOM05D004811 ORTHO05D006888 6.8e-55 218.4 250 56.8
TPR.G39924 Trifolium pratense HOM05D004811 ORTHO05D006888 3.2e-52 209.5 213 57.3
CAN.G606.9 Capsicum annuum HOM05D004811 ORTHO05D006888 5.4e-52 208.8 334 44.6
BcaC07g38890 Brassica carinata HOM05D004811 ORTHO05D006888 6.0e-51 205.3 257 49.0
ECA240G1163 Erigeron canadensis HOM05D004811 ORTHO05D006888 7.8e-51 204.9 284 46.8
HPP92_012441 Vanilla planifolia HOM05D004811 ORTHO05D006888 7.8e-51 204.9 277 49.1
CARHR018370 Cardamine hirsuta HOM05D004811 ORTHO05D006888 1.6e-48 197.2 284 47.2
HanXRQChr03g0072161 Helianthus annuus HOM05D004811 ORTHO05D006888 3.6e-48 196.1 288 47.6
Thhalv10006915m.g Eutrema salsugineum HOM05D004811 ORTHO05D006888 4.7e-48 195.7 284 45.8
PSO210G5098 Papaver somniferum HOM05D004811 ORTHO05D006888 2.9e-45 186.4 284 47.5
unitig_8.g3575 Utricularia gibba HOM05D004811 ORTHO05D006888 6.4e-45 185.3 275 47.3
Os12g0571900 Oryza sativa ssp. japonica HOM05D004811 ORTHO05D006888 3.5e-43 179.5 282 44.7
ATR0307G027 Amborella trichopoda HOM05D004811 ORTHO05D006888 2.5e-41 173.3 300 42.0
CDE09G0881 Ceratophyllum demersum HOM05D004811 ORTHO05D006888 4.3e-41 172.6 219 49.3
PSO210G7430 Papaver somniferum HOM05D004811 ORTHO05D006888 2.8e-40 169.9 273 42.9
Cpa.g.sc111.45 Carica papaya HOM05D004811 ORTHO05D006888 8.1e-40 168.3 176 55.7
Migut.N01206 Erythranthe guttata HOM05D004811 ORTHO05D006888 3.1e-39 166.4 279 39.8
Zm00001eb287160 Zea mays HOM05D004811 ORTHO05D006888 3.4e-38 162.9 290 42.8
Lsat_1_v5_gn_9_108940 Lactuca sativa HOM05D004811 ORTHO05D006888 1.7e-37 160.6 293 42.7
PSO210G4088 Papaver somniferum HOM05D004811 ORTHO05D006888 6.4e-37 158.7 271 41.7
SEGI_25586 Sequoiadendron giganteum HOM05D004811 ORTHO05D006888 4.2e-36 156.0 295 39.7
Hund15156 Selenicereus undatus HOM05D004811 ORTHO05D006888 5.6e-33 145.6 152 57.9
Mapoly0001s0525 Marchantia polymorpha HOM05D004811 ORTHO05D006888 1.3e-26 124.4 336 31.5
Cpa.g.sc111.48 Carica papaya HOM05D004811 ORTHO05D006888 2.3e-26 123.6 95 66.3
SMO356G0171 Selaginella moellendorffii HOM05D004811 ORTHO05D006888 1.5e-22 110.9 277 32.9
RcHm_v2.0_Chr2g0146051 Rosa chinensis HOM05D004811 ORTHO05D006888 2.0e-22 110.5 273 37.7
FvH4_6g34990 Fragaria vesca HOM05D004811 ORTHO05D006888 3.4e-22 109.8 273 35.9
FAN09G3976 Fragaria x ananassa HOM05D004811 ORTHO05D006888 4.5e-22 109.4 265 35.5
Pp3c3_19050 Physcomitrium patens HOM05D004811 ORTHO05D006888 1.3e-21 107.8 362 30.1
FAN14G1986 Fragaria x ananassa HOM05D004811 ORTHO05D006888 2.2e-21 107.1 273 35.5
FAN05G0989 Fragaria x ananassa HOM05D004811 ORTHO05D006888 3.8e-21 106.3 265 35.1
SGA_v2.0_scaffold753G53552 Striga asiatica HOM05D004811 ORTHO05D006888 7.9e-19 98.6 130 49.2
AagrBONN_evm.TU.Sc2ySwM_362.2211 Anthoceros agrestis HOM05D004811 ORTHO05D006888 3.0e-18 96.7 298 30.5
HPP92_028179 Vanilla planifolia HOM05D004811 ORTHO05D006888 3.0e-18 96.7 95 53.7
SGA_v2.0_scaffold55G19835 Striga asiatica HOM05D004811 ORTHO05D006888 2.1e-16 90.5 146 41.8
Sed0006977 Sechium edule HOM05D004811 ORTHO05D006888 2.2e-13 80.5 44 86.4
C09p52830 Brassica napus HOM05D004811 ORTHO05D017514 4.6e-11 72.8 102 44.1
BolC9t58149H Brassica oleracea HOM05D004811 ORTHO05D017514 4.6e-11 72.8 102 44.1
MD09G1000100 Malus domestica HOM05D004811 ORTHO05D006888 1.3e-10 71.2 39 82.1
BcaC04g19678 Brassica carinata HOM05D004811 ORTHO05D017514 1.8e-10 70.9 86 47.7
C03p50580 Brassica napus HOM05D004811 ORTHO05D017514 2.3e-10 70.5 102 43.1
BolC3t17347H Brassica oleracea HOM05D004811 ORTHO05D017514 6.7e-10 68.9 98 43.9
QL02p036407 Quercus lobata HOM05D004811 ORTHO05D006888 2.5e-09 67.0 39 74.4
QL02p036870 Quercus lobata HOM05D004811 ORTHO05D006888 2.5e-09 67.0 39 74.4
CBR_g19801 Chara braunii HOM05D004811 ORTHO05D006888 1.1e-07 61.6 307 23.5


User provided reference genes

Program Settings