Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 2.3e-90 335.5 166 100.0
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 8.0e-75 283.9 170 85.9
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 1.3e-69 266.5 170 80.6
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 2.1e-67 259.2 152 86.2
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 7.6e-57 224.2 150 77.3
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 6.4e-56 221.1 152 74.3
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 1.1e-55 220.3 147 76.9
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 7.1e-55 217.6 135 80.0
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 1.2e-54 216.9 148 73.0
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 6.0e-54 214.5 189 62.4
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 1.3e-53 213.4 134 79.9
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 1.3e-53 213.4 149 74.5
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 1.7e-53 213.0 135 77.8
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 1.7e-53 213.0 145 71.7
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 2.3e-53 212.6 135 77.0
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 6.6e-53 211.1 135 77.8
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 1.9e-52 209.5 137 77.4
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 2.5e-52 209.1 136 77.9
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 7.3e-52 207.6 137 76.6
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 7.3e-52 207.6 160 66.2
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 9.6e-52 207.2 137 77.4
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 1.3e-51 206.8 160 66.2
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 1.3e-51 206.8 122 81.1
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 2.1e-51 206.1 137 76.6
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 3.6e-51 205.3 151 66.2
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 3.6e-51 205.3 135 77.0
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 6.2e-51 204.5 155 66.5
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 1.4e-50 203.4 160 65.6
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 1.8e-50 203.0 141 70.9
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 1.8e-50 203.0 155 66.5
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 3.1e-50 202.2 152 66.4
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 4.0e-50 201.8 157 67.5
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 6.9e-50 201.1 154 64.3
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 9.0e-50 200.7 135 75.6
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 9.0e-50 200.7 135 71.9
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 1.2e-49 200.3 148 69.6
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 1.2e-49 200.3 148 69.6
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 1.2e-49 200.3 148 69.6
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 1.2e-49 200.3 148 69.6
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 3.4e-49 198.7 138 69.6
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 5.8e-49 198.0 138 70.3
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 7.6e-49 197.6 134 73.9
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 9.9e-49 197.2 148 69.6
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 1.3e-48 196.8 112 83.9
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 1.7e-48 196.4 112 85.7
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 3.8e-48 195.3 148 68.2
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 4.2e-47 191.8 151 68.9
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 4.2e-47 191.8 161 60.9
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 7.1e-47 191.0 142 67.6
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 7.1e-47 191.0 133 72.9
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 9.3e-47 190.7 154 66.9
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 3.5e-46 188.7 135 71.9
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 3.5e-46 188.7 162 61.1
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 4.6e-46 188.3 156 62.8
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 6.0e-46 188.0 154 65.6
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 6.0e-46 188.0 135 71.1
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 6.0e-46 188.0 160 61.2
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 1.0e-45 187.2 157 61.1
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 3.0e-45 185.7 142 65.5
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 1.1e-44 183.7 152 65.1
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 1.5e-44 183.3 112 81.2
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 2.5e-44 182.6 145 64.1
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 3.3e-44 182.2 136 68.4
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 4.3e-44 181.8 134 67.9
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 7.3e-44 181.0 118 74.6
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 6.2e-43 177.9 111 75.7
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 8.1e-43 177.6 112 79.5
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 2.4e-42 176.0 107 80.4
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 3.1e-42 175.6 108 80.6
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 4.0e-42 175.3 102 83.3
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 4.0e-42 175.3 102 83.3
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 9.0e-42 174.1 107 78.5
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 1.2e-41 173.7 160 58.1
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 5.8e-41 171.4 128 68.0
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 5.8e-41 171.4 127 66.9
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 3.8e-40 168.7 109 75.2
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 5.4e-39 164.9 179 52.5
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 9.3e-39 164.1 121 66.1
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 7.9e-38 161.0 104 76.9
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 2.3e-37 159.5 110 67.3
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 2.5e-36 156.0 100 77.0
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 4.3e-36 155.2 121 62.8
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 4.3e-36 155.2 134 58.2
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 2.1e-35 152.9 121 62.8
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 3.7e-35 152.1 119 65.5
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 3.7e-35 152.1 121 62.0
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 4.8e-35 151.8 110 69.1
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 6.2e-35 151.4 124 61.3
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 6.2e-35 151.4 125 61.6
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 1.4e-34 150.2 112 68.8
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 3.1e-34 149.1 149 53.0
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 3.1e-34 149.1 158 53.8
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 3.8e-32 142.1 151 55.0
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 1.2e-30 137.1 99 72.7
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 6.0e-30 134.8 108 65.7
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 4.8e-27 125.2 102 59.8
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 6.9e-26 121.3 86 65.1
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 2.0e-17 93.2 79 62.0
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 3.2e-15 85.9 97 53.6
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 3.1e-10 69.3 104 37.5
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 2.6e-09 66.2 69 52.2
A02p40720 Brassica napus HOM05D007331 ORTHO05D009273 1.4e-07 60.5 42 66.7
BraA02t09018Z Brassica rapa HOM05D007331 ORTHO05D009273 1.4e-07 60.5 42 66.7
AagrBONN_evm.TU.Sc2ySwM_368.2672 Anthoceros agrestis HOM05D007331 ORTHO05D009273 7.2e-07 58.2 102 29.4


User provided reference genes

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