Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 0.0e+00 1209.9 597 100.0
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 0.0e+00 1114.4 622 91.5
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 2.5e-299 1031.6 622 83.9
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 2.1e-298 1028.5 623 83.3
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 1.8e-257 892.5 627 71.3
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 5.4e-254 880.9 627 70.5
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 5.9e-253 877.5 624 71.3
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 2.6e-248 862.1 623 68.9
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 3.4e-248 861.7 627 70.0
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 1.3e-247 859.8 627 69.5
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 1.3e-247 859.8 630 69.7
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 7.8e-245 850.5 627 68.9
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 7.8e-245 850.5 625 68.3
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 1.3e-244 849.7 672 64.9
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 5.6e-243 844.3 606 70.6
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 2.1e-242 842.4 623 68.7
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 4.7e-242 841.3 623 68.5
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 3.0e-241 838.6 623 68.5
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 2.0e-240 835.9 624 68.6
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 5.7e-240 834.3 627 67.3
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 2.0e-237 825.9 627 67.9
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 2.7e-237 825.5 622 67.5
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 8.6e-236 820.5 619 67.0
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 2.5e-235 818.9 631 66.7
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 9.5e-235 817.0 572 71.0
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 9.5e-235 817.0 628 67.0
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 9.5e-235 817.0 631 65.9
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 4.7e-234 814.7 628 66.6
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 1.4e-233 813.1 626 66.8
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 1.4e-233 813.1 608 66.4
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 6.8e-233 810.8 633 65.2
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 1.2e-232 810.1 631 65.8
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 4.4e-232 808.1 626 66.0
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 1.3e-231 806.6 649 64.4
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 3.7e-231 805.1 630 65.7
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 4.9e-231 804.7 627 66.3
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 1.4e-230 803.1 654 63.3
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 1.4e-230 803.1 627 64.6
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 1.9e-230 802.7 631 64.8
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 1.9e-230 802.7 627 66.0
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 3.2e-230 802.0 627 66.3
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 4.1e-230 801.6 626 64.5
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 7.0e-230 800.8 627 66.8
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 4.6e-229 798.1 631 65.8
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 3.0e-228 795.4 591 66.8
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 3.0e-228 795.4 627 64.9
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 8.6e-228 793.9 627 64.1
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 8.6e-228 793.9 627 63.6
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 3.3e-227 792.0 627 64.3
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 5.6e-227 791.2 627 65.7
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 9.5e-227 790.4 627 65.4
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 3.6e-226 788.5 627 63.3
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 1.8e-225 786.2 627 63.3
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 1.8e-225 786.2 613 65.7
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 2.0e-224 782.7 626 63.4
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 2.9e-223 778.9 628 63.4
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 3.7e-223 778.5 627 63.6
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 3.7e-223 778.5 604 64.6
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 4.9e-223 778.1 624 63.1
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 6.4e-223 777.7 607 64.6
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 2.1e-221 772.7 635 64.1
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 1.0e-220 770.4 624 61.5
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 4.3e-219 765.0 634 62.5
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 9.5e-219 763.8 624 62.0
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 1.1e-217 760.4 593 64.1
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 1.4e-217 760.0 624 60.9
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 2.3e-217 759.2 581 65.9
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 3.1e-217 758.8 629 62.8
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 5.2e-217 758.1 630 62.7
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 6.8e-217 757.7 633 61.6
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 1.2e-216 756.9 628 61.6
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 2.6e-216 755.7 615 65.0
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 2.2e-215 752.7 572 65.4
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 3.8e-215 751.9 629 59.9
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 1.9e-214 749.6 631 60.7
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 1.9e-214 749.6 620 63.2
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 3.2e-214 748.8 639 61.2
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 5.4e-214 748.0 631 60.9
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 2.1e-213 746.1 633 61.0
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 2.1e-213 746.1 633 61.0
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 2.5e-211 739.2 631 60.9
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 3.3e-211 738.8 448 84.2
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 7.6e-208 727.6 569 63.3
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 3.8e-207 725.3 625 60.6
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 1.9e-206 723.0 625 58.9
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 1.6e-202 709.9 621 59.4
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 1.4e-198 696.8 624 58.7
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 7.9e-197 691.0 601 59.7
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 3.7e-194 682.2 563 62.9
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 6.7e-188 661.4 625 54.9
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 7.4e-179 631.3 602 54.5
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 3.8e-175 619.0 441 70.3
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 2.2e-162 576.6 492 60.0
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 1.0e-156 557.8 636 46.1
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 2.6e-152 543.1 450 61.6
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 1.4e-148 530.8 640 45.6
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 4.0e-148 529.3 415 64.1
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 3.5e-144 516.2 398 65.8
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 6.1e-133 478.8 603 45.6
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.0e-132 478.0 398 61.6
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 1.6e-128 464.2 418 59.3
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 4.7e-125 452.6 633 41.2
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 5.8e-115 419.1 580 42.8
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 5.6e-110 402.5 417 54.7
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 3.1e-92 343.6 273 66.7
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 1.7e-87 327.8 770 30.5
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 6.5e-50 203.0 182 54.4
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 2.4e-44 184.5 174 53.4
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 5.9e-43 179.9 155 59.4
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 2.5e-33 147.9 186 45.7
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 4.8e-29 133.7 148 50.0
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 1.7e-21 108.6 78 70.5
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 1.8e-20 105.1 79 72.2
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 4.4e-14 84.0 91 52.7
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 1.5e-09 68.9 74 52.7
SMO165G0130 Selaginella moellendorffii HOM05D000740 ORTHO05D007141 8.0e-08 63.2 251 25.9
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 1.8e-07 62.0 34 79.4
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 6.8e-07 60.1 40 67.5


User provided reference genes

Program Settings