Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0022684 Sechium edule HOM05D006203 ORTHO05D007675 1.3e-249 865.9 430 100.0
CsaV3_6G002690 Cucumis sativus L. HOM05D006203 ORTHO05D007675 5.6e-221 770.8 430 85.8
ClCG08G002400 Citrullus lanatus HOM05D006203 ORTHO05D007675 2.1e-220 768.8 430 87.4
MELO3C025014.2 Cucumis melo HOM05D006203 ORTHO05D007675 6.2e-220 767.3 430 85.8
Potri.005G193300 Populus trichocarpa HOM05D006203 ORTHO05D007675 2.0e-194 682.6 431 76.3
QL02p038832 Quercus lobata HOM05D006203 ORTHO05D007675 1.3e-193 679.9 429 76.0
Potri.002G066900 Populus trichocarpa HOM05D006203 ORTHO05D007675 1.1e-192 676.8 433 75.5
TWI60G1081 Tripterygium wilfordii HOM05D006203 ORTHO05D007675 1.9e-192 676.0 431 74.0
Sabra05G0147700 Salix brachista HOM05D006203 ORTHO05D007675 7.2e-192 674.1 431 75.6
Thecc.08G154300 Theobroma cacao HOM05D006203 ORTHO05D007675 2.3e-190 669.1 430 74.2
CiPaw.16G011200 Carya illinoinensis HOM05D006203 ORTHO05D007675 6.7e-190 667.5 430 75.8
Hma1.2p1_0105F.1_g050570 Hydrangea macrophylla HOM05D006203 ORTHO05D007675 1.1e-189 666.8 434 74.4
CANSAT25G3154 Cannabis sativa HOM05D006203 ORTHO05D007675 3.3e-189 665.2 431 74.9
Duzib116G0092 Durio zibethinus HOM05D006203 ORTHO05D007675 7.4e-189 664.1 430 73.3
Eucgr.F04230 Eucalyptus grandis HOM05D006203 ORTHO05D007675 4.8e-188 661.4 431 74.5
Cpa.g.sc21.210 Carica papaya HOM05D006203 ORTHO05D007675 2.6e-186 655.6 427 72.8
Manes.02G180400 Manihot esculenta HOM05D006203 ORTHO05D007675 1.0e-185 653.7 422 74.6
TAR628G0500 Trochodendron aralioides HOM05D006203 ORTHO05D007675 2.2e-185 652.5 429 73.4
GSVIVG01034547001 Vitis vinifera HOM05D006203 ORTHO05D007675 6.5e-185 651.0 435 73.6
CSS0037443 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 8.5e-185 650.6 426 73.5
Cfa018314 Carpinus fangiana HOM05D006203 ORTHO05D007675 1.1e-184 650.2 430 73.0
CSS0039383 Camellia sinensis var. sinensis HOM05D006203 ORTHO05D007675 3.2e-184 648.7 426 73.5
COL.COLO4_29853 Corchorus olitorius HOM05D006203 ORTHO05D007675 9.4e-184 647.1 461 68.3
Glyma.20G167800 Glycine max HOM05D006203 ORTHO05D007675 9.4e-184 647.1 431 73.3
Gorai.002G055700 Gossypium raimondii HOM05D006203 ORTHO05D007675 1.6e-183 646.4 430 71.4
Ciclev10001246m.g Citrus clementina HOM05D006203 ORTHO05D007675 2.1e-183 646.0 431 71.9
MD10G1028400 Malus domestica HOM05D006203 ORTHO05D007675 3.6e-183 645.2 430 72.6
Lj5g0013006 Lotus japonicus HOM05D006203 ORTHO05D007675 4.7e-183 644.8 432 72.9
Gohir.D03G060606 Gossypium hirsutum HOM05D006203 ORTHO05D007675 6.1e-183 644.4 430 71.2
Atru.chr13.2086 Acer truncatum HOM05D006203 ORTHO05D007675 2.3e-182 642.5 431 72.2
Gohir.A02G112707 Gossypium hirsutum HOM05D006203 ORTHO05D007675 3.0e-182 642.1 430 70.9
Actinidia29535 Actinidia chinensis HOM05D006203 ORTHO05D007675 1.1e-181 640.2 433 71.1
MD05G1027600 Malus domestica HOM05D006203 ORTHO05D007675 2.6e-181 639.0 430 71.9
Ca_10680_v3 Cicer arietinum L. HOM05D006203 ORTHO05D007675 4.4e-181 638.3 430 73.0
Prupe.8G033400 Prunus persica HOM05D006203 ORTHO05D007675 4.4e-181 638.3 430 72.8
RcHm_v2.0_Chr6g0275101 Rosa chinensis HOM05D006203 ORTHO05D007675 7.4e-181 637.5 429 71.3
VMungo0720G1833 Vigna mungo HOM05D006203 ORTHO05D007675 1.7e-180 636.3 430 72.3
Glyma.10G224051 Glycine max HOM05D006203 ORTHO05D007675 4.1e-179 631.7 415 73.7
Medtr1g098650 Medicago truncatula HOM05D006203 ORTHO05D007675 4.1e-179 631.7 421 72.2
AUR62026688 Chenopodium quinoa HOM05D006203 ORTHO05D007675 9.1e-179 630.6 433 68.4
PGR044G2231 Punica granatum HOM05D006203 ORTHO05D007675 3.5e-178 628.6 430 71.9
PGR100G0007 Punica granatum HOM05D006203 ORTHO05D007675 3.5e-178 628.6 430 71.9
TPR.G17026 Trifolium pratense HOM05D006203 ORTHO05D007675 3.5e-178 628.6 430 70.5
Lj4C698G9 Lonicera japonica HOM05D006203 ORTHO05D007675 5.9e-178 627.9 433 70.0
EL10Ac1g01566 Beta vulgaris HOM05D006203 ORTHO05D007675 7.7e-178 627.5 430 68.8
Rhsim04G0148800 Rhododendron simsii HOM05D006203 ORTHO05D007675 7.7e-178 627.5 444 69.6
AUR62040604 Chenopodium quinoa HOM05D006203 ORTHO05D007675 1.0e-177 627.1 433 67.7
PSO017G3146 Papaver somniferum HOM05D006203 ORTHO05D007675 1.7e-177 626.3 434 69.4
Phvul.007G080700 Phaseolus vulgaris HOM05D006203 ORTHO05D007675 1.7e-177 626.3 430 70.7
PSO063G4112 Papaver somniferum HOM05D006203 ORTHO05D007675 2.9e-177 625.5 434 69.1
Psat1g027320 Pisum sativum HOM05D006203 ORTHO05D007675 1.4e-176 623.2 430 70.2
MBI09_g13282_MAGBIO Magnolia biondii HOM05D006203 ORTHO05D007675 5.5e-176 621.3 421 71.0
CDE06G0803 Ceratophyllum demersum HOM05D006203 ORTHO05D007675 1.0e-174 617.1 429 67.1
Lalb_Chr21g0305501 Lupinus albus HOM05D006203 ORTHO05D007675 1.8e-174 616.3 430 70.0
FvH4_2g13470 Fragaria vesca HOM05D006203 ORTHO05D007675 9.7e-173 610.5 422 70.9
Nitab4.5_0002497g0040 Nicotiana tabacum HOM05D006203 ORTHO05D007675 1.1e-171 607.1 423 68.8
FAN24G2615 Fragaria x ananassa HOM05D006203 ORTHO05D007675 7.0e-171 604.4 422 70.1
FAN27G1038 Fragaria x ananassa HOM05D006203 ORTHO05D007675 1.2e-170 603.6 422 70.1
PGSC0003DMG402024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 2.0e-170 602.8 423 68.8
SGA_v2.0_scaffold24G10302 Striga asiatica HOM05D006203 ORTHO05D007675 2.0e-170 602.8 422 69.7
FAN15G3573 Fragaria x ananassa HOM05D006203 ORTHO05D007675 3.5e-170 602.1 422 70.1
SalBow7G3786 Salvia bowleyana HOM05D006203 ORTHO05D007675 4.5e-170 601.7 422 69.2
Sopen04g027530 Solanum pennellii HOM05D006203 ORTHO05D007675 5.9e-170 601.3 423 68.6
BcaB07g33983 Brassica carinata HOM05D006203 ORTHO05D007675 7.7e-170 600.9 422 69.2
Oeu002058.2 Olea europaea HOM05D006203 ORTHO05D007675 7.7e-170 600.9 451 66.7
SalBow7G2343 Salvia bowleyana HOM05D006203 ORTHO05D007675 1.3e-169 600.1 422 69.2
CAN.G1215.8 Capsicum annuum HOM05D006203 ORTHO05D007675 2.2e-169 599.4 423 68.3
THA.LOC104803037 Tarenaya hassleriana HOM05D006203 ORTHO05D007675 2.2e-169 599.4 422 67.3
Solyc04g071550.2 Solanum lycopersicum HOM05D006203 ORTHO05D007675 3.8e-169 598.6 423 68.1
AL1G51640 Arabidopsis lyrata HOM05D006203 ORTHO05D007675 5.0e-169 598.2 423 69.0
Thhalv10004157m.g Eutrema salsugineum HOM05D006203 ORTHO05D007675 6.5e-169 597.8 422 68.2
Hund17446 Selenicereus undatus HOM05D006203 ORTHO05D007675 6.5e-169 597.8 469 62.5
Carub.0001s3458 Capsella rubella HOM05D006203 ORTHO05D007675 8.5e-169 597.4 423 68.8
DCAR_014434 Daucus carota HOM05D006203 ORTHO05D007675 1.1e-168 597.0 428 66.8
DCAR_014436 Daucus carota HOM05D006203 ORTHO05D007675 1.1e-168 597.0 428 66.8
Sp1g32440 Schrenkiella parvula HOM05D006203 ORTHO05D007675 1.1e-168 597.0 422 69.0
BolC2t08473H Brassica oleracea HOM05D006203 ORTHO05D007675 5.5e-168 594.7 422 68.7
C02p23400 Brassica napus HOM05D006203 ORTHO05D007675 7.2e-168 594.3 422 68.7
BcaC03g14869 Brassica carinata HOM05D006203 ORTHO05D007675 1.6e-167 593.2 422 68.5
A02p14450 Brassica napus HOM05D006203 ORTHO05D007675 2.7e-167 592.4 422 69.0
Nitab4.5_0001187g0150 Nicotiana tabacum HOM05D006203 ORTHO05D007675 3.6e-167 592.0 446 65.5
AT1G43580 Arabidopsis thaliana HOM05D006203 ORTHO05D007675 4.7e-167 591.7 423 68.1
Aa31LG6G9900 Aethionema arabicum HOM05D006203 ORTHO05D007675 1.4e-166 590.1 421 68.2
CARHR035390 Cardamine hirsuta HOM05D006203 ORTHO05D007675 8.8e-166 587.4 423 66.4
vmacro12408 Vaccinium macrocarpon HOM05D006203 ORTHO05D007675 8.8e-166 587.4 536 58.0
Zm00001eb062160 Zea mays HOM05D006203 ORTHO05D007675 4.4e-165 585.1 423 65.7
arahy.Tifrunner.gnm1.ann1.1SB772 Arachis hypogaea HOM05D006203 ORTHO05D007675 5.7e-165 584.7 435 66.0
arahy.Tifrunner.gnm1.ann1.YI7QGP Arachis hypogaea HOM05D006203 ORTHO05D007675 3.7e-164 582.0 427 66.3
Lsat_1_v5_gn_9_41100 Lactuca sativa HOM05D006203 ORTHO05D007675 3.7e-164 582.0 422 65.9
Migut.C00987 Erythranthe guttata HOM05D006203 ORTHO05D007675 1.8e-163 579.7 422 67.8
Ah.05g168000 Amaranthus hybridus HOM05D006203 ORTHO05D007675 5.9e-162 574.7 435 64.6
Os04g0423700 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 7.7e-162 574.3 422 64.7
Oeu051272.1 Olea europaea HOM05D006203 ORTHO05D007675 1.3e-161 573.5 419 67.8
Aqoxy5G02059 Aquilegia oxysepala HOM05D006203 ORTHO05D007675 1.2e-159 567.0 421 66.7
HanXRQChr11g0320311 Helianthus annuus HOM05D006203 ORTHO05D007675 1.2e-159 567.0 423 63.8
ECA232G0861 Erigeron canadensis HOM05D006203 ORTHO05D007675 3.0e-158 562.4 423 63.6
ATR0820G052 Amborella trichopoda HOM05D006203 ORTHO05D007675 1.8e-155 553.1 423 63.1
Peaxi162Scf00599g00123 Petunia axillaris HOM05D006203 ORTHO05D007675 1.2e-154 550.4 423 63.8
Zm00001eb243320 Zea mays HOM05D006203 ORTHO05D007675 5.0e-153 545.0 429 60.1
Sed0004557 Sechium edule HOM05D006203 ORTHO05D007675 3.6e-151 538.9 434 65.9
Os02g0543100 Oryza sativa ssp. japonica HOM05D006203 ORTHO05D007675 5.2e-150 535.0 418 63.6
SEGI_28248 Sequoiadendron giganteum HOM05D006203 ORTHO05D007675 9.8e-149 530.8 426 61.3
Haze_17763 Corylus avellana HOM05D006203 ORTHO05D007675 6.8e-142 508.1 337 73.3
Cc10_g14900 Coffea canephora HOM05D006203 ORTHO05D007675 2.9e-140 502.7 358 68.2
SMO165G0112 Selaginella moellendorffii HOM05D006203 ORTHO05D007675 3.2e-139 499.2 431 56.8
AagrBONN_evm.TU.Sc2ySwM_344.5191 Anthoceros agrestis HOM05D006203 ORTHO05D007675 1.9e-136 490.0 424 55.7
HPP92_014433 Vanilla planifolia HOM05D006203 ORTHO05D007675 3.6e-135 485.7 429 57.8
unitig_82.g27121 Utricularia gibba HOM05D006203 ORTHO05D007675 1.4e-131 473.8 433 57.5
Mapoly0036s0040 Marchantia polymorpha HOM05D006203 ORTHO05D007675 7.0e-131 471.5 426 53.3
Pp3c10_9040 Physcomitrium patens HOM05D006203 ORTHO05D007675 1.6e-130 470.3 425 53.6
Sc02g0003970 Simmondsia chinensis HOM05D006203 ORTHO05D007675 2.3e-121 439.9 298 70.5
SHI09072 Sapria himalayana HOM05D006203 ORTHO05D007675 3.0e-121 439.5 353 61.5
Dinv41071 Davidia involucrata HOM05D006203 ORTHO05D007675 4.7e-119 432.2 269 77.0
Pp3c1_26540 Physcomitrium patens HOM05D006203 ORTHO05D007675 6.2e-119 431.8 430 48.6
Dinv41073 Davidia involucrata HOM05D006203 ORTHO05D007675 3.6e-111 406.0 267 73.0
BcaC08g42813 Brassica carinata HOM05D006203 ORTHO05D007675 4.0e-110 402.5 422 52.4
Nn5g28766 Nelumbo nucifera HOM05D006203 ORTHO05D007675 5.0e-84 315.8 197 75.6
CBR_g4804 Chara braunii HOM05D006203 ORTHO05D007675 4.3e-80 302.8 423 40.7
Zm00001eb440740 Zea mays HOM05D006203 ORTHO05D007675 3.6e-74 283.1 239 57.7
C06p00250 Brassica napus HOM05D006203 ORTHO05D007675 3.3e-64 250.0 178 66.9
MSTRG.1091 Avicennia marina HOM05D006203 ORTHO05D007675 1.7e-63 247.7 186 65.1
Dinv41070 Davidia involucrata HOM05D006203 ORTHO05D007675 1.8e-49 201.1 140 70.0
BraA02t06509Z Brassica rapa HOM05D006203 ORTHO05D007675 9.2e-30 135.6 88 72.7
SHI09073 Sapria himalayana HOM05D006203 ORTHO05D007675 9.2e-30 135.6 91 67.0
PGSC0003DMG401024096 Solanum tuberosum HOM05D006203 ORTHO05D007675 3.5e-29 133.7 89 65.2
Peaxi162Scf00599g00124 Petunia axillaris HOM05D006203 ORTHO05D007675 9.8e-24 115.5 89 59.6
Cre01.g033050 Chlamydomonas reinhardtii HOM05D006203 ORTHO05D007675 4.9e-15 86.7 362 24.9
PSO063G4868 Papaver somniferum HOM05D006203 ORTHO05D007675 3.3e-11 73.9 92 45.7
CSS0028086 Camellia sinensis var. sinensis HOM05D001336 ORTHO05D001211 1.2e-08 65.5 41 73.2


User provided reference genes

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