Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021590 Sechium edule HOM05D006178 ORTHO05D007504 1.8e-142 509.2 247 100.0
MELO3C016656.2 Cucumis melo HOM05D006178 ORTHO05D007504 5.9e-114 414.5 234 80.8
CsaV3_5G015780 Cucumis sativus L. HOM05D006178 ORTHO05D007504 2.2e-113 412.5 227 82.8
ClCG09G011820 Citrullus lanatus HOM05D006178 ORTHO05D007504 9.4e-112 407.1 233 82.0
TWI74G1561 Tripterygium wilfordii HOM05D006178 ORTHO05D007504 2.2e-89 332.8 223 66.8
Psat6g046400 Pisum sativum HOM05D006178 ORTHO05D007504 2.9e-89 332.4 221 67.4
Haze_10879 Corylus avellana HOM05D006178 ORTHO05D007504 6.5e-89 331.3 227 67.0
GSVIVG01011660001 Vitis vinifera HOM05D006178 ORTHO05D007504 2.5e-88 329.3 227 66.5
FvH4_4g33550 Fragaria vesca HOM05D006178 ORTHO05D007504 4.2e-88 328.6 227 67.8
CiPaw.05G188700 Carya illinoinensis HOM05D006178 ORTHO05D007504 8.0e-87 324.3 227 66.1
Dinv07729 Davidia involucrata HOM05D006178 ORTHO05D007504 1.0e-86 323.9 227 64.8
FAN07G2930 Fragaria x ananassa HOM05D006178 ORTHO05D007504 1.0e-86 323.9 227 66.5
MD13G1020300 Malus domestica HOM05D006178 ORTHO05D007504 1.0e-86 323.9 227 65.6
Atru.chr11.922 Acer truncatum HOM05D006178 ORTHO05D007504 3.0e-86 322.4 227 67.0
QL03p035908 Quercus lobata HOM05D006178 ORTHO05D007504 6.8e-86 321.2 246 61.4
Medtr1g032430 Medicago truncatula HOM05D006178 ORTHO05D007504 8.8e-86 320.9 223 63.7
Prupe.1G333400 Prunus persica HOM05D006178 ORTHO05D007504 1.2e-85 320.5 234 64.1
FAN12G1191 Fragaria x ananassa HOM05D006178 ORTHO05D007504 2.0e-85 319.7 239 64.4
FAN22G2090 Fragaria x ananassa HOM05D006178 ORTHO05D007504 2.0e-85 319.7 239 64.4
Glyma.02G085100 Glycine max HOM05D006178 ORTHO05D007504 5.7e-85 318.2 220 66.4
TPR.G36937 Trifolium pratense HOM05D006178 ORTHO05D007504 1.3e-84 317.0 222 64.0
Ca_12542_v3 Cicer arietinum L. HOM05D006178 ORTHO05D007504 6.3e-84 314.7 221 65.6
Duzib251G0568 Durio zibethinus HOM05D006178 ORTHO05D007504 6.3e-84 314.7 227 66.5
FAN17G1905 Fragaria x ananassa HOM05D006178 ORTHO05D007504 6.3e-84 314.7 238 63.0
Lj2g0017740 Lotus japonicus HOM05D006178 ORTHO05D007504 1.1e-83 313.9 223 65.0
arahy.Tifrunner.gnm1.ann1.M99K8C Arachis hypogaea HOM05D006178 ORTHO05D007504 7.0e-83 311.2 222 63.5
Gohir.A01G146700 Gossypium hirsutum HOM05D006178 ORTHO05D007504 7.0e-83 311.2 227 66.1
arahy.Tifrunner.gnm1.ann1.56CUD8 Arachis hypogaea HOM05D006178 ORTHO05D007504 9.1e-83 310.8 222 63.5
Potri.010G106400 Populus trichocarpa HOM05D006178 ORTHO05D007504 9.1e-83 310.8 229 65.5
Thecc.02G292800 Theobroma cacao HOM05D006178 ORTHO05D007504 9.1e-83 310.8 225 65.8
COL.COLO4_16591 Corchorus olitorius HOM05D006178 ORTHO05D007504 2.0e-82 309.7 227 65.2
Gorai.002G172000 Gossypium raimondii HOM05D006178 ORTHO05D007504 2.7e-82 309.3 227 65.6
Thhalv10007963m.g Eutrema salsugineum HOM05D006178 ORTHO05D007504 1.7e-81 306.6 216 65.7
Ciclev10015964m.g Citrus clementina HOM05D006178 ORTHO05D007504 2.3e-81 306.2 229 63.8
Gohir.D01G139900 Gossypium hirsutum HOM05D006178 ORTHO05D007504 2.3e-81 306.2 227 64.8
Eucgr.B02675 Eucalyptus grandis HOM05D006178 ORTHO05D007504 5.0e-81 305.1 227 63.9
Actinidia38440 Actinidia chinensis HOM05D006178 ORTHO05D007504 5.5e-80 301.6 219 63.9
THA.LOC104821906 Tarenaya hassleriana HOM05D006178 ORTHO05D007504 9.5e-80 300.8 225 63.6
Cpa.g.sc2.193 Carica papaya HOM05D006178 ORTHO05D007504 1.6e-79 300.1 228 64.0
Lsat_1_v5_gn_3_53481 Lactuca sativa HOM05D006178 ORTHO05D007504 2.8e-79 299.3 225 63.1
DCAR_007330 Daucus carota HOM05D006178 ORTHO05D007504 3.6e-79 298.9 228 61.4
Lalb_Chr17g0338441 Lupinus albus HOM05D006178 ORTHO05D007504 3.0e-78 295.8 203 66.5
CANSAT01G0234 Cannabis sativa HOM05D006178 ORTHO05D007504 4.0e-78 295.4 229 60.7
PGSC0003DMG400028747 Solanum tuberosum HOM05D006178 ORTHO05D007504 4.0e-78 295.4 215 61.9
Sopen07g004780 Solanum pennellii HOM05D006178 ORTHO05D007504 6.8e-78 294.7 230 60.0
Solyc07g008850.3 Solanum lycopersicum HOM05D006178 ORTHO05D007504 8.9e-78 294.3 230 59.6
Hma1.2p1_0277F.1_g111690 Hydrangea macrophylla HOM05D006178 ORTHO05D007504 1.5e-77 293.5 229 60.3
Lj6C738G3 Lonicera japonica HOM05D001486 ORTHO05D007504 1.5e-77 293.5 207 65.2
Sp1g23080 Schrenkiella parvula HOM05D006178 ORTHO05D007504 2.0e-77 293.1 220 62.7
Carub.0001s2539 Capsella rubella HOM05D006178 ORTHO05D007504 3.4e-77 292.4 216 63.4
CAN.G511.14 Capsicum annuum HOM05D006178 ORTHO05D007504 3.4e-77 292.4 219 61.2
Nitab4.5_0000018g0160 Nicotiana tabacum HOM05D006178 ORTHO05D007504 2.2e-76 289.7 224 60.3
AT1G24793 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 6.3e-76 288.1 216 63.4
AT1G25054 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 6.3e-76 288.1 216 63.4
AT1G25145 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 6.3e-76 288.1 216 63.4
AT1G25210 Arabidopsis thaliana HOM05D006178 ORTHO05D007504 6.3e-76 288.1 216 63.4
HanXRQChr15g0476731 Helianthus annuus HOM05D006178 ORTHO05D007504 1.1e-75 287.3 228 60.5
AL1G40190 Arabidopsis lyrata HOM05D006178 ORTHO05D007504 1.8e-75 286.6 216 63.4
SalBow2G2905 Salvia bowleyana HOM05D006178 ORTHO05D007504 1.8e-75 286.6 228 59.2
Aa31LG7G9330 Aethionema arabicum HOM05D006178 ORTHO05D007504 1.2e-74 283.9 229 61.1
Migut.E00482 Erythranthe guttata HOM05D006178 ORTHO05D007504 2.7e-74 282.7 224 60.7
Oeu044010.1 Olea europaea HOM05D006178 ORTHO05D007504 2.7e-74 282.7 206 63.6
Sc04g0008610 Simmondsia chinensis HOM05D006178 ORTHO05D007504 5.9e-74 281.6 223 60.5
A08p26780 Brassica napus HOM05D006178 ORTHO05D007504 1.0e-73 280.8 216 61.6
BcaC01g01670 Brassica carinata HOM05D006178 ORTHO05D007504 1.7e-73 280.0 216 61.6
BraA08t34624Z Brassica rapa HOM05D006178 ORTHO05D007504 1.7e-73 280.0 223 59.6
EL10Ac2g02672 Beta vulgaris HOM05D006178 ORTHO05D007504 2.9e-73 279.3 223 59.2
ECA246G2474 Erigeron canadensis HOM05D006178 ORTHO05D007504 2.5e-72 276.2 225 59.6
Manes.15G134200 Manihot esculenta HOM05D006178 ORTHO05D007504 3.3e-72 275.8 225 61.8
Phvul.003G019200 Phaseolus vulgaris HOM05D006178 ORTHO05D007504 4.3e-72 275.4 220 60.0
C03p73180 Brassica napus HOM05D006178 ORTHO05D007504 5.6e-72 275.0 218 61.0
BolC3t19616H Brassica oleracea HOM05D006178 ORTHO05D007504 5.6e-72 275.0 218 61.0
Cc11_g07280 Coffea canephora HOM05D006178 ORTHO05D007504 1.2e-71 273.9 221 56.6
BcaB03g12042 Brassica carinata HOM05D006178 ORTHO05D007504 6.1e-71 271.6 213 60.1
Nitab4.5_0009975g0010 Nicotiana tabacum HOM05D006178 ORTHO05D007504 1.4e-70 270.4 248 53.6
Ah.02g128010 Amaranthus hybridus HOM05D006178 ORTHO05D007504 1.8e-70 270.0 221 56.6
Peaxi162Scf00937g00336 Petunia axillaris HOM05D006178 ORTHO05D007504 3.1e-70 269.2 228 55.3
AUR62014248 Chenopodium quinoa HOM05D006178 ORTHO05D007504 8.9e-70 267.7 225 55.1
AUR62038473 Chenopodium quinoa HOM05D006178 ORTHO05D007504 3.4e-69 265.8 225 54.7
PSO478G4000 Papaver somniferum HOM05D006178 ORTHO05D007504 9.8e-69 264.2 217 57.1
PSO017G4246 Papaver somniferum HOM05D006178 ORTHO05D007504 1.1e-67 260.8 217 55.8
Gohir.D08G117400 Gossypium hirsutum HOM05D006178 ORTHO05D007504 1.2e-66 257.3 193 63.2
Gohir.D10G193800 Gossypium hirsutum HOM05D006178 ORTHO05D007504 1.2e-66 257.3 192 63.5
Gorai.001G151600 Gossypium raimondii HOM05D006178 ORTHO05D007504 4.6e-66 255.4 192 62.5
Gohir.D13G135551 Gossypium hirsutum HOM05D006178 ORTHO05D007504 1.0e-65 254.2 193 62.7
Gorai.010G050600 Gossypium raimondii HOM05D006178 ORTHO05D007504 1.3e-65 253.8 192 63.0
Gohir.D07G139600 Gossypium hirsutum HOM05D006178 ORTHO05D007504 1.7e-65 253.4 192 62.5
CSS0005024 Camellia sinensis var. sinensis HOM05D006178 ORTHO05D007504 1.6e-63 246.9 192 60.9
CSS0001732 Camellia sinensis var. sinensis HOM05D006178 ORTHO05D007504 2.1e-63 246.5 184 62.5
Hund24927 Selenicereus undatus HOM05D006178 ORTHO05D007504 6.8e-62 241.5 312 43.3
MBI13_g29562_MAGBIO Magnolia biondii HOM05D006178 ORTHO05D007504 4.9e-60 235.3 230 52.6
Sabra10G0077800 Salix brachista HOM05D006178 ORTHO05D007504 4.6e-58 228.8 165 66.1
Os03g0223900 Oryza sativa ssp. japonica HOM05D006178 ORTHO05D007504 1.1e-56 224.2 225 50.7
ATR0753G153 Amborella trichopoda HOM05D006178 ORTHO05D007504 2.5e-56 223.0 214 50.9
HPP92_013128 Vanilla planifolia HOM05D006178 ORTHO05D007504 3.3e-56 222.6 217 53.9
Gohir.D11G251901 Gossypium hirsutum HOM05D006178 ORTHO05D007504 1.6e-55 220.3 192 57.8
Aqoxy3G00007 Aquilegia oxysepala HOM05D006178 ORTHO05D007504 2.8e-55 219.5 230 51.3
TAR629G3300 Trochodendron aralioides HOM05D006178 ORTHO05D007504 8.1e-55 218.0 187 56.7
CDE05G0668 Ceratophyllum demersum HOM05D006178 ORTHO05D007504 6.8e-54 214.9 208 52.4
vmacro00552 Vaccinium macrocarpon HOM05D006178 ORTHO05D007504 2.0e-53 213.4 219 50.7
Gorai.005G149500 Gossypium raimondii HOM05D006178 ORTHO05D007504 9.9e-53 211.1 193 54.9
Gorai.005G145500 Gossypium raimondii HOM05D006178 ORTHO05D007504 1.9e-51 206.8 202 54.0
unitig_22.g5599 Utricularia gibba HOM05D000369 ORTHO05D000253 2.7e-50 203.0 229 49.3
Mapoly0012s0127 Marchantia polymorpha HOM05D006178 ORTHO05D007504 7.3e-48 194.9 215 47.4
Zm00001eb009130 Zea mays HOM05D006178 ORTHO05D007504 7.3e-48 194.9 223 46.6
Pp3c3_1850 Physcomitrium patens HOM05D006178 ORTHO05D007504 3.8e-44 182.6 221 43.4
RcHm_v2.0_Chr7g0235121 Rosa chinensis HOM05D006178 ORTHO05D007504 3.2e-43 179.5 124 65.3
SGA_v2.0_scaffold23G10206 Striga asiatica HOM05D006178 ORTHO05D007504 3.5e-42 176.0 194 49.5
SEGI_10880 Sequoiadendron giganteum HOM05D006178 ORTHO05D007504 5.6e-40 168.7 192 45.3
AagrBONN_evm.TU.Sc2ySwM_340.423 Anthoceros agrestis HOM05D006178 ORTHO05D007504 9.9e-37 157.9 211 42.7
Gorai.007G245600 Gossypium raimondii HOM05D006178 ORTHO05D007504 9.9e-37 157.9 123 60.2
Gohir.D11G228700 Gossypium hirsutum HOM05D006178 ORTHO05D007504 1.7e-36 157.1 121 61.2
CARHR026360 Cardamine hirsuta HOM05D006178 ORTHO05D007504 4.9e-36 155.6 118 64.4
SMO232G0119 Selaginella moellendorffii HOM05D006178 ORTHO05D007504 8.4e-36 154.8 200 45.0
Gorai.009G391300 Gossypium raimondii HOM05D006178 ORTHO05D007504 2.1e-34 150.2 108 65.7
Nn3g18364 Nelumbo nucifera HOM05D006178 ORTHO05D007504 1.7e-28 130.6 107 57.9
HPP92_013158 Vanilla planifolia HOM05D006178 ORTHO05D007504 8.4e-28 128.3 123 52.0
CBR_g12524 Chara braunii HOM05D006178 ORTHO05D007504 7.1e-27 125.2 300 31.0
MCO09G291 Micromonas commoda HOM05D006178 ORTHO05D007504 3.3e-24 116.3 201 40.3
PRCOL_00001866 Prasinoderma coloniale HOM05D006178 ORTHO05D007504 1.6e-23 114.0 212 34.4
Glyma.13G258800 Glycine max HOM05D006178 ORTHO05D007504 2.1e-23 113.6 77 67.5
Glyma.13G368200 Glycine max HOM05D006178 ORTHO05D007504 2.1e-23 113.6 77 67.5
Cre16.g653350 Chlamydomonas reinhardtii HOM05D006178 ORTHO05D007504 6.3e-15 85.5 182 31.9
Ca_29306_v3 Cicer arietinum L. HOM05D001616 ORTHO05D007504 2.4e-14 83.6 210 30.5
CSS0004101 Camellia sinensis var. sinensis HOM05D006178 ORTHO05D007504 2.2e-07 60.5 35 71.4
CSS0007559 Camellia sinensis var. sinensis HOM05D006178 ORTHO05D007504 2.2e-07 60.5 35 71.4
QL02p029395 Quercus lobata HOM05D002431 ORTHO05D002543 2.8e-07 60.1 51 54.9
Gohir.D08G060150 Gossypium hirsutum HOM05D006178 ORTHO05D007504 1.4e-06 57.8 39 64.1
MCO05G527 Micromonas commoda HOM05D014289 ORTHO05D018957 2.4e-06 57.0 121 36.4


User provided reference genes

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