Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021571 Sechium edule HOM05D007216 ORTHO05D009261 9.3e-139 496.9 255 100.0
CsaV3_2G013060 Cucumis sativus L. HOM05D007216 ORTHO05D009261 1.1e-78 297.4 271 61.6
Sed0000846 Sechium edule HOM05D007216 ORTHO05D009261 3.8e-76 288.9 255 63.5
MELO3C026778.2 Cucumis melo HOM05D007216 ORTHO05D009261 6.1e-74 281.6 262 59.9
ClCG06G006720 Citrullus lanatus HOM05D007216 ORTHO05D009261 2.2e-71 273.1 258 61.2
Sed0019243 Sechium edule HOM05D007216 ORTHO05D009261 7.8e-69 264.6 254 59.4
QL06p015626 Quercus lobata HOM05D007216 ORTHO05D009261 3.6e-34 149.4 254 38.6
CiPaw.01G190600 Carya illinoinensis HOM05D007216 ORTHO05D009261 6.2e-34 148.7 248 40.3
Duzib052G0756 Durio zibethinus HOM05D007216 ORTHO05D009261 6.2e-34 148.7 232 39.7
Haze_11299 Corylus avellana HOM05D007216 ORTHO05D009261 1.1e-33 147.9 252 38.5
Haze_11297 Corylus avellana HOM05D007216 ORTHO05D009261 2.4e-33 146.7 252 38.1
Thecc.04G245800 Theobroma cacao HOM05D007216 ORTHO05D009261 2.4e-33 146.7 245 39.2
Cfa008380 Carpinus fangiana HOM05D007216 ORTHO05D009261 3.1e-33 146.4 240 38.3
Prupe.1G030500 Prunus persica HOM05D007216 ORTHO05D009261 4.4e-32 142.5 214 42.1
Duzib151G0820 Durio zibethinus HOM05D007216 ORTHO05D009261 2.2e-31 140.2 233 38.6
MSTRG.4097 Avicennia marina HOM05D007216 ORTHO05D009261 6.4e-31 138.7 249 36.1
Duzib151G0028 Durio zibethinus HOM05D007216 ORTHO05D009261 8.4e-31 138.3 233 38.2
Rhsim02G0032900 Rhododendron simsii HOM05D007216 ORTHO05D009261 1.1e-30 137.9 189 42.9
COL.COLO4_15786 Corchorus olitorius HOM05D007216 ORTHO05D009261 1.9e-30 137.1 249 36.9
MD16G1208400 Malus domestica HOM05D007216 ORTHO05D009261 1.9e-30 137.1 183 43.2
CSS0019068 Camellia sinensis var. sinensis HOM05D007216 ORTHO05D009261 5.4e-30 135.6 187 43.3
Cc03_g04820 Coffea canephora HOM05D007216 ORTHO05D009261 5.4e-30 135.6 216 42.6
Sopen09g032280 Solanum pennellii HOM05D007216 ORTHO05D009261 7.1e-30 135.2 186 39.8
Potri.008G161800 Populus trichocarpa HOM05D007216 ORTHO05D009261 9.3e-30 134.8 230 37.0
CiPaw.02G116600 Carya illinoinensis HOM05D007216 ORTHO05D009261 1.2e-29 134.4 192 42.2
MD13G1206900 Malus domestica HOM05D007216 ORTHO05D009261 1.6e-29 134.0 246 38.2
Potri.010G077000 Populus trichocarpa HOM05D007216 ORTHO05D009261 4.6e-29 132.5 238 35.3
RcHm_v2.0_Chr4g0390311 Rosa chinensis HOM05D007216 ORTHO05D009261 6.0e-29 132.1 247 38.9
Actinidia05467 Actinidia chinensis HOM05D007216 ORTHO05D009261 1.0e-28 131.3 181 43.6
Solyc09g083360.3 Solanum lycopersicum HOM05D007216 ORTHO05D009261 1.0e-28 131.3 186 38.7
Atru.chr4.2233 Acer truncatum HOM05D007216 ORTHO05D009261 1.3e-28 131.0 252 36.9
Sabra10G0031800 Salix brachista HOM05D007216 ORTHO05D009261 1.7e-28 130.6 244 34.0
Aa31LG5G3580 Aethionema arabicum HOM05D007216 ORTHO05D009261 2.3e-28 130.2 245 36.7
DCAR_027275 Daucus carota HOM05D007216 ORTHO05D009261 6.6e-28 128.6 207 38.6
Actinidia08446 Actinidia chinensis HOM05D007216 ORTHO05D009261 1.1e-27 127.9 184 46.7
Cpa.g.sc58.45 Carica papaya HOM05D007216 ORTHO05D009261 1.1e-27 127.9 217 35.9
QL06p015621 Quercus lobata HOM05D007216 ORTHO05D009261 1.5e-27 127.5 227 37.9
AL390U10010 Arabidopsis lyrata HOM05D007216 ORTHO05D009261 2.5e-27 126.7 241 34.9
Ciclev10005777m.g Citrus clementina HOM05D007216 ORTHO05D009261 2.5e-27 126.7 213 39.4
Eucgr.H00196 Eucalyptus grandis HOM05D007216 ORTHO05D009261 2.5e-27 126.7 247 34.8
Migut.G00433 Erythranthe guttata HOM05D007216 ORTHO05D009261 9.6e-27 124.8 223 37.7
PGR031G3332 Punica granatum HOM05D007216 ORTHO05D009261 1.6e-26 124.0 242 36.0
BcaC06g31685 Brassica carinata HOM05D007216 ORTHO05D009261 6.2e-26 122.1 186 38.7
BraA09t37658Z Brassica rapa HOM05D007216 ORTHO05D009261 6.2e-26 122.1 193 40.4
Gohir.A09G222900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 1.1e-25 121.3 221 38.0
Nn3g19525 Nelumbo nucifera HOM05D007216 ORTHO05D009261 1.1e-25 121.3 241 34.4
TAR365G0907 Trochodendron aralioides HOM05D007216 ORTHO05D009261 1.4e-25 120.9 214 40.2
Thhalv10003353m.g Eutrema salsugineum HOM05D007216 ORTHO05D009261 2.4e-25 120.2 180 41.7
BcaC04g21907 Brassica carinata HOM05D007216 ORTHO05D009261 4.0e-25 119.4 189 40.2
Gorai.006G246400 Gossypium raimondii HOM05D007216 ORTHO05D009261 5.3e-25 119.0 220 37.7
BcaB07g31004 Brassica carinata HOM05D007216 ORTHO05D009261 6.9e-25 118.6 189 39.7
CARHR006300 Cardamine hirsuta HOM05D007216 ORTHO05D009261 6.9e-25 118.6 251 32.3
Eucgr.J01563 Eucalyptus grandis HOM05D007216 ORTHO05D009261 6.9e-25 118.6 188 37.2
THA.LOC104827376 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 6.9e-25 118.6 190 38.4
Duzib212G0514 Durio zibethinus HOM05D007216 ORTHO05D009261 9.0e-25 118.2 214 37.4
Nn1g02593 Nelumbo nucifera HOM05D007216 ORTHO05D009261 9.0e-25 118.2 204 39.7
ATR0665G548 Amborella trichopoda HOM05D007216 ORTHO05D009261 3.4e-24 116.3 215 35.3
Dinv29914 Davidia involucrata HOM05D007216 ORTHO05D009261 3.4e-24 116.3 148 48.6
FvH4_4g02610 Fragaria vesca HOM05D007216 ORTHO05D009261 4.5e-24 115.9 186 39.8
Psat6g102240 Pisum sativum HOM05D007216 ORTHO05D009261 5.8e-24 115.5 259 33.6
AT5G43650 Arabidopsis thaliana HOM05D007216 ORTHO05D009261 7.6e-24 115.2 166 42.2
Gohir.D09G224900 Gossypium hirsutum HOM05D007216 ORTHO05D009261 9.9e-24 114.8 181 39.8
CANSAT78G2280 Cannabis sativa HOM05D007216 ORTHO05D009261 1.3e-23 114.4 255 35.3
Manes.03G169100 Manihot esculenta HOM05D007216 ORTHO05D009261 1.3e-23 114.4 244 34.8
THA.LOC104801097 Tarenaya hassleriana HOM05D007216 ORTHO05D009261 1.3e-23 114.4 265 32.5
Sabra08G0123600 Salix brachista HOM05D007216 ORTHO05D009261 3.8e-23 112.8 217 35.0
A09p20520 Brassica napus HOM05D007216 ORTHO05D009261 6.4e-23 112.1 196 38.3
Peaxi162Scf00813g00118 Petunia axillaris HOM05D007216 ORTHO05D009261 6.4e-23 112.1 178 40.4
BolC9t55498H Brassica oleracea HOM05D007216 ORTHO05D009261 1.4e-22 110.9 187 40.6
BcaC06g34638 Brassica carinata HOM05D007216 ORTHO05D009261 1.9e-22 110.5 188 37.8
A06p47770 Brassica napus HOM05D007216 ORTHO05D009261 1.9e-22 110.5 186 38.7
C07p26230 Brassica napus HOM05D007216 ORTHO05D009261 1.9e-22 110.5 188 37.8
BolC7t43151H Brassica oleracea HOM05D007216 ORTHO05D009261 1.9e-22 110.5 188 37.8
DCAR_027276 Daucus carota HOM05D007216 ORTHO05D009261 2.4e-22 110.2 216 33.3
Oeu008788.2 Olea europaea HOM05D007216 ORTHO05D009261 2.4e-22 110.2 220 35.9
C09p25930 Brassica napus HOM05D007216 ORTHO05D009261 5.4e-22 109.0 170 41.2
Glyma.02G000800 Glycine max HOM05D007216 ORTHO05D009261 7.1e-22 108.6 195 37.4
Carub.0008s0499 Capsella rubella HOM05D007216 ORTHO05D009261 9.3e-22 108.2 190 37.4
GSVIVG01018111001 Vitis vinifera HOM05D007216 ORTHO05D009261 9.3e-22 108.2 182 38.5
SpUn0744_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 2.7e-21 106.7 167 37.7
Sc13g0004990 Simmondsia chinensis HOM05D007216 ORTHO05D009261 4.6e-21 105.9 224 35.3
Gohir.D02G042400 Gossypium hirsutum HOM05D007216 ORTHO05D009261 1.0e-20 104.8 230 37.0
TWI73G0753 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 1.3e-20 104.4 202 35.1
Gorai.005G046700 Gossypium raimondii HOM05D007216 ORTHO05D009261 3.9e-20 102.8 230 36.5
Lalb_Chr03g0037861 Lupinus albus HOM05D007216 ORTHO05D009261 3.9e-20 102.8 214 35.5
TAR636G2640 Trochodendron aralioides HOM05D007216 ORTHO05D009261 5.1e-20 102.4 206 37.4
FAN12G1817 Fragaria x ananassa HOM05D007216 ORTHO05D009261 8.7e-20 101.7 165 39.4
Medtr1g040435 Medicago truncatula HOM05D007216 ORTHO05D009261 1.5e-19 100.9 262 30.9
BraA06t27645Z Brassica rapa HOM05D007216 ORTHO05D009261 4.3e-19 99.4 176 38.1
Nitab4.5_0004798g0070 Nicotiana tabacum HOM05D007216 ORTHO05D009261 4.8e-18 95.9 150 42.0
Gohir.A02G035500 Gossypium hirsutum HOM05D007216 ORTHO05D009261 8.1e-18 95.1 229 33.6
TWI09G1088 Tripterygium wilfordii HOM05D007216 ORTHO05D009261 1.1e-17 94.7 214 32.2
Phvul.007G280700 Phaseolus vulgaris HOM05D007216 ORTHO05D009261 1.5e-16 90.9 141 41.1
TPR.G22479 Trifolium pratense HOM05D007216 ORTHO05D009261 3.4e-16 89.7 222 32.9
Os03g0741100 Oryza sativa ssp. japonica HOM05D007216 ORTHO05D009261 3.8e-15 86.3 154 34.4
CAN.G1007.15 Capsicum annuum HOM05D007216 ORTHO05D009261 1.1e-14 84.7 106 44.3
Hma1.2p1_0893F.1_g233480 Hydrangea macrophylla HOM05D007216 ORTHO05D009261 2.5e-14 83.6 110 43.6
Zm00001eb056760 Zea mays HOM05D007216 ORTHO05D009261 4.2e-14 82.8 165 35.2
SpUn0429_0010 Schrenkiella parvula HOM05D007216 ORTHO05D009261 1.5e-11 74.3 165 30.9
Dinv44631 Davidia involucrata HOM05D007216 ORTHO05D009261 5.7e-11 72.4 112 41.1
Lj6C656T7 Lonicera japonica HOM05D007216 ORTHO05D009261 5.7e-11 72.4 111 40.5
Nitab4.5_0000525g0160 Nicotiana tabacum HOM05D007216 ORTHO05D009261 9.6e-11 71.6 215 29.3
HPP92_027840 Vanilla planifolia HOM05D007216 ORTHO05D009261 9.6e-11 71.6 226 31.0
Aqoxy5G00327 Aquilegia oxysepala HOM05D007216 ORTHO05D009261 3.1e-09 66.6 119 37.8
HPP92_023468 Vanilla planifolia HOM05D007216 ORTHO05D009261 9.0e-09 65.1 257 28.8
HPP92_023463 Vanilla planifolia HOM05D007216 ORTHO05D009261 4.5e-08 62.8 213 31.0


User provided reference genes

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