Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 0.0e+00 1109.7 536 100.0
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 1.3e-278 962.6 536 86.9
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 3.1e-277 958.0 536 87.7
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 4.1e-253 877.9 465 89.7
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 2.5e-234 815.5 524 74.6
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 1.7e-230 802.7 463 80.6
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 1.4e-229 799.7 542 71.8
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 1.8e-229 799.3 534 73.4
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 1.8e-229 799.3 535 72.3
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 2.4e-229 798.9 464 80.8
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 1.2e-228 796.6 544 72.4
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 4.5e-228 794.7 545 71.7
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 5.9e-228 794.3 514 74.1
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 1.0e-227 793.5 545 71.4
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 2.9e-227 792.0 512 74.0
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 3.8e-227 791.6 542 72.1
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 5.5e-226 787.7 468 77.6
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 9.4e-226 786.9 461 80.3
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 2.1e-225 785.8 465 79.8
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 6.1e-225 784.3 539 72.4
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 1.0e-224 783.5 544 70.8
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 2.3e-224 782.3 539 72.2
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 3.0e-224 781.9 539 72.0
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 1.5e-223 779.6 543 70.3
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 2.0e-223 779.2 539 71.4
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 2.6e-223 778.9 540 70.6
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 2.6e-223 778.9 539 70.1
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 3.4e-223 778.5 466 78.1
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 3.4e-223 778.5 537 69.6
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 4.4e-223 778.1 521 72.7
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 7.5e-223 777.3 464 78.9
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 1.3e-222 776.5 506 74.1
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 1.7e-222 776.2 538 70.6
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.4e-221 773.1 539 71.2
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 1.4e-221 773.1 541 70.8
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 2.4e-221 772.3 547 69.7
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 1.6e-220 769.6 459 78.4
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 2.0e-220 769.2 464 77.2
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 5.9e-220 767.7 543 70.2
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 1.3e-219 766.5 546 68.9
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 1.7e-219 766.1 504 73.4
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 2.9e-219 765.4 490 74.9
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 3.8e-219 765.0 541 69.3
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 3.8e-219 765.0 489 74.2
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 6.6e-219 764.2 465 76.6
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 8.6e-219 763.8 462 76.8
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 1.5e-218 763.1 611 63.8
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 3.3e-218 761.9 541 69.3
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 3.3e-218 761.9 463 76.5
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 9.5e-218 760.4 497 71.8
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 1.2e-217 760.0 539 68.3
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 1.6e-217 759.6 467 75.2
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 2.8e-217 758.8 544 67.5
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 3.6e-217 758.4 490 73.3
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 3.6e-217 758.4 533 69.6
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 1.4e-216 756.5 465 75.9
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 4.0e-216 755.0 556 67.1
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 1.2e-215 753.4 529 69.2
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 1.5e-215 753.1 466 74.2
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 2.6e-215 752.3 485 73.8
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 1.3e-214 750.0 461 75.9
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 1.3e-214 750.0 467 73.9
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 2.9e-214 748.8 559 66.9
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 2.9e-214 748.8 465 75.9
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 4.9e-214 748.0 533 67.0
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 6.4e-214 747.7 467 75.8
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 6.4e-214 747.7 519 70.1
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 1.1e-213 746.9 518 69.3
Ca_15984_v3 Cicer arietinum L. HOM05D004653 ORTHO05D006221 1.1e-213 746.9 461 75.5
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 9.2e-213 743.8 539 67.0
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 1.2e-212 743.4 502 71.1
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 3.5e-212 741.9 482 73.4
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 1.7e-211 739.6 539 67.3
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 2.3e-211 739.2 474 74.5
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 2.3e-211 739.2 465 74.8
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 2.3e-211 739.2 524 71.0
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 3.9e-211 738.4 514 70.0
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 1.1e-210 736.9 468 74.4
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 1.5e-210 736.5 470 73.8
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 3.3e-210 735.3 542 67.7
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 5.6e-210 734.6 465 74.8
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 1.2e-209 733.4 465 74.6
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 2.8e-209 732.3 530 67.2
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 4.7e-209 731.5 465 74.2
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 8.0e-209 730.7 465 74.2
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 1.0e-208 730.3 514 69.8
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 1.8e-208 729.6 461 74.8
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 1.5e-207 726.5 512 69.3
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 2.0e-207 726.1 498 69.5
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 4.4e-207 724.9 465 74.0
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 5.8e-207 724.5 503 68.8
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 2.2e-206 722.6 497 70.0
Sc01g0000970 Simmondsia chinensis HOM05D004653 ORTHO05D006221 1.3e-203 713.4 421 77.7
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 1.7e-203 713.0 486 71.2
Sc01g0000980 Simmondsia chinensis HOM05D004653 ORTHO05D006221 4.3e-202 708.4 421 77.4
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 2.2e-198 696.0 478 69.5
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 6.4e-198 694.5 618 57.6
Cc04_g13590 Coffea canephora HOM05D004653 ORTHO05D006221 5.4e-197 691.4 436 73.4
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 1.6e-196 689.9 537 65.0
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 2.1e-196 689.5 478 68.8
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 7.8e-196 687.6 457 71.6
unitig_26.g9628 Utricularia gibba HOM05D004653 ORTHO05D006221 2.0e-191 672.9 458 67.7
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 6.0e-188 661.4 439 70.8
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 1.1e-186 657.1 468 70.5
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 1.2e-185 653.7 462 65.8
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 4.7e-185 651.7 464 67.0
Oeu042973.1 Olea europaea HOM05D004653 ORTHO05D006221 1.3e-182 643.7 421 72.0
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 7.8e-180 634.4 489 61.1
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 3.9e-179 632.1 462 64.9
CAN.G853.20 Capsicum annuum HOM05D004653 ORTHO05D006221 1.9e-178 629.8 464 62.9
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 5.3e-176 621.7 447 64.9
SGA_v2.0_scaffold467G52033 Striga asiatica HOM05D004653 ORTHO05D006221 2.4e-173 612.8 462 62.8
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 7.4e-170 601.3 464 61.6
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 2.6e-167 592.8 464 60.8
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 1.3e-166 590.5 470 62.8
SalBow5G2478 Salvia bowleyana HOM05D004653 ORTHO05D006221 3.2e-165 585.9 458 60.9
Migut.I00062 Erythranthe guttata HOM05D004653 ORTHO05D006221 4.2e-165 585.5 459 61.4
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 5.1e-163 578.6 463 59.8
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 1.1e-162 577.4 348 77.3
AagrBONN_evm.TU.Sc2ySwM_368.1227 Anthoceros agrestis HOM05D004653 ORTHO05D006221 1.9e-154 550.1 462 58.7
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 2.5e-154 549.7 484 56.2
MSTRG.23084 Avicennia marina HOM05D004653 ORTHO05D006221 5.5e-141 505.4 355 67.3
Nitab4.5_0024258g0010 Nicotiana tabacum HOM05D004653 ORTHO05D006221 2.2e-134 483.4 314 72.6
Cre08.g378200 Chlamydomonas reinhardtii HOM05D004653 ORTHO05D006221 4.4e-122 442.6 502 48.2
Zm00001eb027880 Zea mays HOM05D004653 ORTHO05D006221 2.9e-118 429.9 269 74.3
MBI17_g06166_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.5e-114 417.5 316 65.8
Lalb_Chr23g0270171 Lupinus albus HOM05D004653 ORTHO05D006221 8.3e-113 411.8 263 71.1
PGSC0003DMG400024580 Solanum tuberosum HOM05D004653 ORTHO05D006221 5.4e-112 409.1 421 49.2
CSS0017284 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 9.5e-101 371.7 261 67.0
Actinidia10360 Actinidia chinensis HOM05D004653 ORTHO05D006221 2.1e-92 344.0 326 56.7
CBR_g24311 Chara braunii HOM05D000019 ORTHO05D000353 6.0e-87 325.9 255 60.0
Glyma.06G095500 Glycine max HOM05D004653 ORTHO05D006221 2.3e-86 323.9 255 67.1
SEGI_17033 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 3.9e-86 323.2 260 58.5
MCO02G367 Micromonas commoda HOM05D004653 ORTHO05D006221 2.4e-75 287.3 242 57.0
Duzib116G0761 Durio zibethinus HOM05D004653 ORTHO05D006221 5.2e-67 259.6 172 75.6
CBR_g24313 Chara braunii HOM05D004653 ORTHO05D006221 9.3e-56 222.2 162 64.8
Lalb_Chr23g0270161 Lupinus albus HOM05D004653 ORTHO05D006221 8.7e-54 215.7 144 72.2
Nitab4.5_0005655g0030 Nicotiana tabacum HOM05D004653 ORTHO05D006221 4.3e-45 186.8 113 73.5
Dinv42645 Davidia involucrata HOM05D004653 ORTHO05D006221 4.9e-41 173.3 157 56.7
Cc06_g21090 Coffea canephora HOM05D004653 ORTHO05D006221 4.6e-39 166.8 100 83.0
Glyma.06G095451 Glycine max HOM05D004653 ORTHO05D006221 1.9e-37 161.4 177 50.3
SEGI_12419 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 8.2e-36 156.0 91 75.8
Potri.005G159500 Populus trichocarpa HOM05D004653 ORTHO05D006221 8.5e-33 146.0 115 62.6
CSS0010132 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 4.3e-29 133.7 95 65.3
Dinv42644 Davidia involucrata HOM05D004653 ORTHO05D006221 2.2e-17 94.7 113 51.3
PRCOL_00006962 Prasinoderma coloniale HOM05D004653 ORTHO05D006221 1.1e-13 82.4 58 60.3
Gohir.A06G032660 Gossypium hirsutum HOM05D004653 ORTHO05D019566 1.3e-12 79.0 48 87.5
Gorai.010G036500 Gossypium raimondii HOM05D004653 ORTHO05D019566 1.3e-12 79.0 48 87.5
Lalb_Chr23g0270181 Lupinus albus HOM05D004653 ORTHO05D019566 1.3e-12 79.0 62 72.6
BcaB08g35370 Brassica carinata HOM05D004653 ORTHO05D006221 2.0e-10 71.6 57 57.9
CSS0005277 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D019566 3.6e-07 60.8 50 68.0


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