Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020533 Sechium edule HOM05D006296 ORTHO05D007777 2.0e-67 258.8 120 100.0
ClCG00G005210 Citrullus lanatus HOM05D006296 ORTHO05D007777 2.2e-34 149.1 97 69.1
ClCG01G022900 Citrullus lanatus HOM05D006296 ORTHO05D007777 2.2e-34 149.1 97 69.1
MELO3C007289.2 Cucumis melo HOM05D006296 ORTHO05D007777 3.8e-34 148.3 95 69.5
CsaV3_6G050070 Cucumis sativus L. HOM05D006296 ORTHO05D007777 3.8e-34 148.3 95 69.5
Sed0007841 Sechium edule HOM05D006296 ORTHO05D007777 5.0e-34 147.9 95 70.5
FvH4_5g20990 Fragaria vesca HOM05D006296 ORTHO05D007777 1.6e-24 116.3 96 58.3
FAN18G2724 Fragaria x ananassa HOM05D006296 ORTHO05D007777 1.6e-24 116.3 96 58.3
FAN21G3093 Fragaria x ananassa HOM05D006296 ORTHO05D007777 2.7e-24 115.5 95 60.0
MD10G1295500 Malus domestica HOM05D006296 ORTHO05D007777 2.7e-24 115.5 95 60.0
FvH4_3g09420 Fragaria vesca HOM05D006296 ORTHO05D007777 4.7e-24 114.8 95 58.9
FAN08G1739 Fragaria x ananassa HOM05D006296 ORTHO05D007777 4.7e-24 114.8 97 57.7
RcHm_v2.0_Chr5g0008131 Rosa chinensis HOM05D006296 ORTHO05D007777 4.7e-24 114.8 95 58.9
MD05G1314200 Malus domestica HOM05D006296 ORTHO05D007777 1.0e-23 113.6 96 59.4
QL05p039836 Quercus lobata HOM05D006296 ORTHO05D007777 3.0e-23 112.1 96 54.2
CDE04G3708 Ceratophyllum demersum HOM05D006296 ORTHO05D007777 1.7e-21 106.3 98 53.1
TPR.G12044 Trifolium pratense HOM05D006296 ORTHO05D007777 1.7e-21 106.3 77 61.0
FAN11G0154 Fragaria x ananassa HOM05D006296 ORTHO05D007777 2.2e-21 105.9 103 54.4
Manes.16G026200 Manihot esculenta HOM05D006296 ORTHO05D007777 2.8e-21 105.5 99 50.5
HPP92_014805 Vanilla planifolia HOM05D006296 ORTHO05D007777 2.8e-21 105.5 97 54.6
VMungo0251G3500 Vigna mungo HOM05D006296 ORTHO05D007777 3.7e-21 105.1 95 53.7
Dinv07546 Davidia involucrata HOM05D006296 ORTHO05D007777 4.8e-21 104.8 96 50.0
Psat7g112640 Pisum sativum HOM05D006296 ORTHO05D007777 1.1e-20 103.6 96 54.2
Prupe.4G044900 Prunus persica HOM05D006296 ORTHO05D007777 1.1e-20 103.6 66 65.2
Actinidia07582 Actinidia chinensis HOM05D006296 ORTHO05D007777 1.4e-20 103.2 113 49.6
Medtr4g088930 Medicago truncatula HOM05D006296 ORTHO05D007777 2.4e-20 102.4 74 62.2
ATR0680G190 Amborella trichopoda HOM05D006296 ORTHO05D007777 3.1e-20 102.1 93 51.6
Nitab4.5_0003942g0060 Nicotiana tabacum HOM05D006296 ORTHO05D007777 3.1e-20 102.1 99 50.5
Glyma.13G180700 Glycine max HOM05D006296 ORTHO05D007777 5.3e-20 101.3 68 61.8
Cfa000430 Carpinus fangiana HOM05D006296 ORTHO05D007777 9.1e-20 100.5 65 63.1
Nn1g04048 Nelumbo nucifera HOM05D006296 ORTHO05D007777 1.2e-19 100.1 95 50.5
Nitab4.5_0013250g0030 Nicotiana tabacum HOM05D006296 ORTHO05D007777 1.2e-19 100.1 101 49.5
GSVIVG01002932001 Vitis vinifera HOM05D006296 ORTHO05D007777 1.6e-19 99.8 73 58.9
CiPaw.10G047400 Carya illinoinensis HOM05D006296 ORTHO05D007777 2.7e-19 99.0 66 63.6
Hma1.2p1_0126F.1_g059310 Hydrangea macrophylla HOM05D006296 ORTHO05D007777 2.7e-19 99.0 105 48.6
SEGI_22799 Sequoiadendron giganteum HOM05D006296 ORTHO05D007777 2.7e-19 99.0 95 53.7
CiPaw.09G058300 Carya illinoinensis HOM05D006296 ORTHO05D007777 4.5e-19 98.2 95 50.5
Lj6g0008813 Lotus japonicus HOM05D006296 ORTHO05D007777 4.5e-19 98.2 95 48.4
TWI38G1090 Tripterygium wilfordii HOM05D006296 ORTHO05D007777 4.5e-19 98.2 100 47.0
HanXRQChr01g0003901 Helianthus annuus HOM05D006296 ORTHO05D007777 5.9e-19 97.8 95 49.5
Phvul.006G187000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 7.7e-19 97.4 95 52.6
Glyma.07G195600 Glycine max HOM05D006296 ORTHO05D007777 1.0e-18 97.1 95 51.6
PSO541G0808 Papaver somniferum HOM05D006296 ORTHO05D007777 1.0e-18 97.1 97 48.5
Aqoxy1G02520 Aquilegia oxysepala HOM05D006296 ORTHO05D007777 1.3e-18 96.7 95 46.3
Duzib235G1545 Durio zibethinus HOM05D006296 ORTHO05D007777 1.3e-18 96.7 95 47.4
Duzib160G0870 Durio zibethinus HOM05D006296 ORTHO05D007777 1.7e-18 96.3 98 48.0
Peaxi162Scf00530g00219 Petunia axillaris HOM05D006296 ORTHO05D007777 1.7e-18 96.3 97 49.5
MSTRG.15892 Avicennia marina HOM05D006296 ORTHO05D007777 2.2e-18 95.9 105 47.6
Cc02_g13190 Coffea canephora HOM05D006296 ORTHO05D007777 2.2e-18 95.9 64 57.8
AUR62016993 Chenopodium quinoa HOM05D006296 ORTHO05D007777 3.8e-18 95.1 95 48.4
Lalb_Chr16g0383701 Lupinus albus HOM05D006296 ORTHO05D007777 3.8e-18 95.1 77 54.5
Sabra04G0025800 Salix brachista HOM05D006296 ORTHO05D007777 3.8e-18 95.1 99 46.5
PSO675G2929 Papaver somniferum HOM05D006296 ORTHO05D007777 6.5e-18 94.4 95 49.5
Os04g0680300 Oryza sativa ssp. japonica HOM05D006296 ORTHO05D007777 1.1e-17 93.6 95 43.2
VMungo0540G1954 Vigna mungo HOM05D006296 ORTHO05D007777 1.1e-17 93.6 90 50.0
Lj2A287T56 Lonicera japonica HOM05D006296 ORTHO05D007777 1.5e-17 93.2 97 45.4
AUR62014802 Chenopodium quinoa HOM05D006296 ORTHO05D007777 1.9e-17 92.8 96 47.9
Ca_18536_v3 Cicer arietinum L. HOM05D006296 ORTHO05D007777 1.9e-17 92.8 61 62.3
CSS0006104 Camellia sinensis var. sinensis HOM05D006296 ORTHO05D007777 2.5e-17 92.4 66 54.5
THA.LOC104812881 Tarenaya hassleriana HOM05D006296 ORTHO05D007777 2.5e-17 92.4 95 45.3
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 3.2e-17 92.0 82 47.6
ECA247G1807 Erigeron canadensis HOM05D006296 ORTHO05D007777 3.2e-17 92.0 96 49.0
Gohir.D06G131300 Gossypium hirsutum HOM05D006296 ORTHO05D007777 4.2e-17 91.7 96 46.9
Gorai.010G153200 Gossypium raimondii HOM05D006296 ORTHO05D007777 4.2e-17 91.7 96 46.9
Hund21232 Selenicereus undatus HOM05D006296 ORTHO05D007777 4.2e-17 91.7 92 45.7
Thecc.06G189800 Theobroma cacao HOM05D006296 ORTHO05D007777 4.2e-17 91.7 95 45.3
arahy.Tifrunner.gnm1.ann1.6I4RI9 Arachis hypogaea HOM05D006296 ORTHO05D007777 7.2e-17 90.9 66 57.6
Gohir.A06G126500 Gossypium hirsutum HOM05D006296 ORTHO05D007777 7.2e-17 90.9 99 45.5
Aa31LG6G3700 Aethionema arabicum HOM05D006296 ORTHO05D007777 9.4e-17 90.5 94 50.0
Sc05g0007770 Simmondsia chinensis HOM05D006296 ORTHO05D007777 9.4e-17 90.5 95 44.2
EL10Ac8g20365 Beta vulgaris HOM05D006296 ORTHO05D007777 1.2e-16 90.1 99 44.4
Solyc10g009040.4 Solanum lycopersicum HOM05D006296 ORTHO05D007777 1.2e-16 90.1 101 45.5
Sopen10g004820 Solanum pennellii HOM05D006296 ORTHO05D007777 1.2e-16 90.1 101 45.5
CANSAT35G0041 Cannabis sativa HOM05D006296 ORTHO05D007777 1.6e-16 89.7 90 52.2
Eucgr.D00634 Eucalyptus grandis HOM05D006296 ORTHO05D007777 1.6e-16 89.7 98 45.9
Lsat_1_v5_gn_1_126121 Lactuca sativa HOM05D006296 ORTHO05D007777 1.6e-16 89.7 95 48.4
Oeu005074.1 Olea europaea HOM05D006296 ORTHO05D007777 1.6e-16 89.7 100 45.0
AL7G32220 Arabidopsis lyrata HOM05D006296 ORTHO05D007777 2.1e-16 89.4 103 44.7
CARHR228450 Cardamine hirsuta HOM05D006296 ORTHO05D007777 2.1e-16 89.4 93 45.2
Potri.004G041700 Populus trichocarpa HOM05D006296 ORTHO05D007777 2.1e-16 89.4 98 42.9
DCAR_018474 Daucus carota HOM05D006296 ORTHO05D007777 2.7e-16 89.0 89 48.3
BcaC09g51212 Brassica carinata HOM05D006296 ORTHO05D007777 6.1e-16 87.8 63 54.0
A01p13040 Brassica napus HOM05D006296 ORTHO05D007777 6.1e-16 87.8 63 54.0
C01p15710 Brassica napus HOM05D006296 ORTHO05D007777 6.1e-16 87.8 63 54.0
BolC1t01524H Brassica oleracea HOM05D006296 ORTHO05D007777 6.1e-16 87.8 63 54.0
BraA01t01246Z Brassica rapa HOM05D006296 ORTHO05D007777 6.1e-16 87.8 63 54.0
SGA_v2.0_scaffold49G18290 Striga asiatica HOM05D006296 ORTHO05D007777 1.8e-15 86.3 99 44.4
AT4G21720 Arabidopsis thaliana HOM05D006296 ORTHO05D007777 2.3e-15 85.9 91 44.0
BcaC06g30674 Brassica carinata HOM05D006296 ORTHO05D007777 4.0e-15 85.1 59 54.2
BcaNung00839 Brassica carinata HOM05D006296 ORTHO05D007777 4.0e-15 85.1 59 54.2
A03p52890 Brassica napus HOM05D006296 ORTHO05D007777 4.0e-15 85.1 59 54.2
BraA03t14365Z Brassica rapa HOM05D006296 ORTHO05D007777 4.0e-15 85.1 59 54.2
Migut.H01493 Erythranthe guttata HOM05D006296 ORTHO05D007777 4.0e-15 85.1 126 39.7
Nitab4.5_0005954g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 4.0e-15 85.1 81 46.9
Sabra11G0035100 Salix brachista HOM05D006296 ORTHO05D007777 4.0e-15 85.1 105 44.8
Sopen02g023280 Solanum pennellii HOM05D006296 ORTHO05D007777 4.0e-15 85.1 76 48.7
Migut.M01153 Erythranthe guttata HOM05D006296 ORTHO05D007777 5.2e-15 84.7 101 43.6
Carub.0007s1968 Capsella rubella HOM05D006296 ORTHO05D007777 6.8e-15 84.3 94 42.6
Nitab4.5_0002158g0020 Nicotiana tabacum HOM05D006296 ORTHO05D007777 6.8e-15 84.3 80 47.5
BcaNung00841 Brassica carinata HOM05D006296 ORTHO05D007777 1.2e-14 83.6 102 40.2
Thhalv10026538m.g Eutrema salsugineum HOM05D006296 ORTHO05D007777 1.2e-14 83.6 55 60.0
CAN.G1164.13 Capsicum annuum HOM05D006296 ORTHO05D007777 1.5e-14 83.2 66 48.5
Sp7g19880 Schrenkiella parvula HOM05D006296 ORTHO05D007777 1.5e-14 83.2 101 42.6
Solyc02g078430.3 Solanum lycopersicum HOM05D006296 ORTHO05D007777 3.4e-14 82.0 76 47.4
Phvul.002G228000 Phaseolus vulgaris HOM05D006296 ORTHO05D007777 1.3e-13 80.1 96 47.9
Atru.chr10.1908 Acer truncatum HOM05D006296 ORTHO05D007777 1.7e-13 79.7 103 45.6
Rhsim13G0176800 Rhododendron simsii HOM05D006296 ORTHO05D007777 2.8e-13 79.0 70 47.1
Zm00001eb065930 Zea mays HOM05D006296 ORTHO05D007777 2.8e-13 79.0 97 42.3
PGSC0003DMG400022442 Solanum tuberosum HOM05D006296 ORTHO05D007777 3.7e-13 78.6 70 47.1
Nn1g06589 Nelumbo nucifera HOM05D006296 ORTHO05D007777 4.8e-13 78.2 47 66.0
unitig_22.g6746 Utricularia gibba HOM05D006296 ORTHO05D007777 2.4e-12 75.9 100 42.0
BcaNung02241 Brassica carinata HOM05D006296 ORTHO05D007777 5.4e-12 74.7 47 57.4
SalBow7G3743 Salvia bowleyana HOM05D006296 ORTHO05D007777 9.1e-12 73.9 133 36.1
PGR004G1731 Punica granatum HOM05D006296 ORTHO05D007777 1.7e-10 69.7 95 41.1
AagrBONN_evm.TU.Sc2ySwM_362.1174 Anthoceros agrestis HOM05D006296 ORTHO05D007777 1.6e-08 63.2 56 51.8
Actinidia25618 Actinidia chinensis HOM05D006296 ORTHO05D007777 6.1e-08 61.2 46 56.5
Haze_06487 Corylus avellana HOM05D006296 ORTHO05D007777 8.0e-08 60.8 67 47.8
arahy.Tifrunner.gnm1.ann1.F25ZWM Arachis hypogaea HOM05D006296 ORTHO05D007777 2.0e-06 56.2 34 67.6
Cpa.g.sc27.57 Carica papaya HOM05D006296 ORTHO05D007777 9.8e-06 53.9 63 42.9
Ciclev10017521m.g Citrus clementina HOM05D006296 ORTHO05D007777 9.8e-06 53.9 34 61.8


User provided reference genes

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