Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020487 Sechium edule HOM05D007345 ORTHO05D009277 2.6e-141 505.4 256 100.0
CsaV3_1G005120 Cucumis sativus L. HOM05D007345 ORTHO05D009277 3.1e-102 375.6 260 77.3
ClCG04G012580 Citrullus lanatus HOM05D007345 ORTHO05D009277 9.5e-91 337.4 287 66.2
RcHm_v2.0_Chr7g0177311 Rosa chinensis HOM05D007345 ORTHO05D009277 2.6e-80 302.8 246 65.0
Cfa017791 Carpinus fangiana HOM05D007345 ORTHO05D009277 9.8e-80 300.8 245 64.5
FAN18G3356 Fragaria x ananassa HOM05D007345 ORTHO05D009277 8.3e-79 297.7 245 65.7
FAN08G2921 Fragaria x ananassa HOM05D007345 ORTHO05D009277 1.6e-77 293.5 246 64.6
GSVIVG01029370001 Vitis vinifera HOM05D007345 ORTHO05D009277 2.3e-76 289.7 217 66.8
FvH4_5g18270 Fragaria vesca HOM05D007345 ORTHO05D009277 3.0e-76 289.3 240 64.6
TWI60G0762 Tripterygium wilfordii HOM05D007345 ORTHO05D009277 1.5e-75 287.0 219 66.2
arahy.Tifrunner.gnm1.ann1.TRXD5D Arachis hypogaea HOM05D007345 ORTHO05D009277 3.3e-75 285.8 228 62.3
arahy.Tifrunner.gnm1.ann1.X12NHK Arachis hypogaea HOM05D007345 ORTHO05D009277 3.3e-75 285.8 228 62.3
CiPaw.16G072000 Carya illinoinensis HOM05D007345 ORTHO05D009277 5.6e-75 285.0 239 63.2
Glyma.05G249000 Glycine max HOM05D007345 ORTHO05D009277 5.6e-75 285.0 229 64.2
Cpa.g.sc111.41 Carica papaya HOM05D007345 ORTHO05D009277 1.2e-74 283.9 220 61.4
FAN04G1809 Fragaria x ananassa HOM05D007345 ORTHO05D009277 1.2e-74 283.9 243 63.4
Atru.chr9.353 Acer truncatum HOM05D007345 ORTHO05D009277 1.6e-74 283.5 219 63.5
Haze_18424 Corylus avellana HOM05D007345 ORTHO05D009277 2.8e-74 282.7 231 65.4
Phvul.002G333600 Phaseolus vulgaris HOM05D007345 ORTHO05D009277 4.7e-74 282.0 219 65.8
Ca_17167_v3 Cicer arietinum L. HOM05D007345 ORTHO05D009277 8.0e-74 281.2 220 65.5
TAR485G0005 Trochodendron aralioides HOM05D007345 ORTHO05D009277 8.0e-74 281.2 263 56.7
Ciclev10021617m.g Citrus clementina HOM05D007345 ORTHO05D009277 2.3e-73 279.6 243 59.7
Hma1.2p1_0403F.1_g145230 Hydrangea macrophylla HOM05D007345 ORTHO05D009277 3.1e-73 279.3 215 63.3
LjContig00484g0026271 Lotus japonicus HOM05D007345 ORTHO05D009277 8.9e-73 277.7 219 63.9
TAR629G2718 Trochodendron aralioides HOM05D007345 ORTHO05D009277 8.9e-73 277.7 261 57.1
TAR629G0192 Trochodendron aralioides HOM05D007345 ORTHO05D009277 1.2e-72 277.3 263 56.3
Dinv13291 Davidia involucrata HOM05D007345 ORTHO05D009277 2.0e-72 276.6 214 65.9
MD06G1238300 Malus domestica HOM05D007345 ORTHO05D009277 2.0e-72 276.6 226 64.2
Thecc.03G072800 Theobroma cacao HOM05D007345 ORTHO05D009277 1.7e-71 273.5 239 59.0
Eucgr.H00620 Eucalyptus grandis HOM05D007345 ORTHO05D009277 3.7e-71 272.3 214 62.6
Lalb_Chr09g0330151 Lupinus albus HOM05D007345 ORTHO05D009277 8.3e-71 271.2 219 61.2
EL10Ac8g19438 Beta vulgaris HOM05D007345 ORTHO05D009277 2.4e-70 269.6 247 56.7
CANSAT01G1136 Cannabis sativa HOM05D007345 ORTHO05D009277 4.1e-70 268.9 215 64.2
Medtr3g015440 Medicago truncatula HOM05D007345 ORTHO05D009277 5.4e-70 268.5 218 61.9
Actinidia35146 Actinidia chinensis HOM05D007345 ORTHO05D009277 1.6e-69 266.9 214 62.1
Potri.015G029700 Populus trichocarpa HOM05D007345 ORTHO05D009277 3.0e-68 262.7 218 60.6
CSS0049327 Camellia sinensis var. sinensis HOM05D007345 ORTHO05D009277 5.1e-68 261.9 214 62.6
Lj5A166T75 Lonicera japonica HOM05D007345 ORTHO05D009277 6.6e-68 261.5 200 64.5
Prupe.5G242200 Prunus persica HOM05D007345 ORTHO05D009277 6.6e-68 261.5 234 59.8
Oeu061194.1 Olea europaea HOM05D007345 ORTHO05D009277 3.3e-67 259.2 255 53.3
HanXRQChr13g0409411 Helianthus annuus HOM05D007345 ORTHO05D009277 4.3e-67 258.8 240 56.2
AUR62033076 Chenopodium quinoa HOM05D007345 ORTHO05D009277 7.3e-67 258.1 243 56.4
COL.COLO4_05810 Corchorus olitorius HOM05D007345 ORTHO05D009277 7.3e-67 258.1 220 59.5
Migut.D02059 Erythranthe guttata HOM05D007345 ORTHO05D009277 1.2e-66 257.3 230 57.4
PGR083G0906 Punica granatum HOM05D007345 ORTHO05D009277 1.6e-66 256.9 221 58.8
Cc00_g18760 Coffea canephora HOM05D007345 ORTHO05D009277 2.1e-66 256.5 243 56.4
CAN.G1909.2 Capsicum annuum HOM05D007345 ORTHO05D009277 2.8e-66 256.1 237 56.1
Sc10g0008500 Simmondsia chinensis HOM05D007345 ORTHO05D009277 2.8e-66 256.1 235 57.0
BcaB06g25825 Brassica carinata HOM05D007345 ORTHO05D009277 1.1e-65 254.2 219 55.7
Aqoxy3G04287 Aquilegia oxysepala HOM05D007345 ORTHO05D009277 3.1e-65 252.7 247 55.1
AT3G17670 Arabidopsis thaliana HOM05D007345 ORTHO05D009277 3.1e-65 252.7 216 58.3
CARHR093010 Cardamine hirsuta HOM05D007345 ORTHO05D009277 3.1e-65 252.7 219 58.0
Carub.0003s1739 Capsella rubella HOM05D007345 ORTHO05D009277 6.8e-65 251.5 220 57.3
Solyc03g098440.4 Solanum lycopersicum HOM05D007345 ORTHO05D009277 8.9e-65 251.1 220 58.2
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 1.2e-64 250.8 213 58.2
BraA05t22048Z Brassica rapa HOM05D007345 ORTHO05D009277 2.0e-64 250.0 213 56.3
SalBow1G0799 Salvia bowleyana HOM05D007345 ORTHO05D009277 2.0e-64 250.0 258 50.8
AL3G30780 Arabidopsis lyrata HOM05D007345 ORTHO05D009277 2.6e-64 249.6 220 57.3
C05p48720 Brassica napus HOM05D007345 ORTHO05D009277 5.8e-64 248.4 213 55.9
BolC5t33608H Brassica oleracea HOM05D007345 ORTHO05D009277 5.8e-64 248.4 213 55.9
Sabra15G0024900 Salix brachista HOM05D007345 ORTHO05D009277 9.9e-64 247.7 236 54.2
A05p32180 Brassica napus HOM05D007345 ORTHO05D009277 1.3e-63 247.3 213 56.3
Sopen03g029180 Solanum pennellii HOM05D007345 ORTHO05D009277 1.7e-63 246.9 217 58.5
Peaxi162Scf00171g00331 Petunia axillaris HOM05D007345 ORTHO05D009277 2.2e-63 246.5 225 58.2
Rhsim12G0136700 Rhododendron simsii HOM05D007345 ORTHO05D009277 3.7e-63 245.7 216 58.3
Manes.02G214200 Manihot esculenta HOM05D007345 ORTHO05D009277 4.9e-63 245.4 219 55.7
PSO782G0509 Papaver somniferum HOM05D007345 ORTHO05D009277 8.3e-63 244.6 247 52.6
VMungo0251G1758 Vigna mungo HOM05D007345 ORTHO05D009277 8.3e-63 244.6 231 58.4
Sp3g15810 Schrenkiella parvula HOM05D007345 ORTHO05D009277 1.4e-62 243.8 213 55.9
Nitab4.5_0004612g0070 Nicotiana tabacum HOM05D000066 ORTHO05D000003 1.9e-62 243.4 231 55.0
SGA_v2.0_scaffold164G38118 Striga asiatica HOM05D007345 ORTHO05D009277 2.4e-62 243.0 235 55.3
Lsat_1_v5_gn_3_108980 Lactuca sativa HOM05D007345 ORTHO05D009277 5.4e-62 241.9 247 52.2
Nitab4.5_0000782g0230 Nicotiana tabacum HOM05D000001 ORTHO05D000003 1.6e-61 240.4 204 59.8
CDE05G0430 Ceratophyllum demersum HOM05D007345 ORTHO05D009277 2.7e-61 239.6 214 54.7
Thhalv10021436m.g Eutrema salsugineum HOM05D007345 ORTHO05D009277 4.6e-61 238.8 218 53.7
AUR62034041 Chenopodium quinoa HOM05D007345 ORTHO05D009277 1.3e-60 237.3 250 52.4
MELO3C001950.2 Cucumis melo HOM05D007345 ORTHO05D009277 5.1e-60 235.3 175 72.0
unitig_0.g26 Utricularia gibba HOM05D007345 ORTHO05D009277 5.1e-60 235.3 223 52.5
HPP92_025712 Vanilla planifolia HOM05D007345 ORTHO05D009277 5.2e-57 225.3 210 53.3
HPP92_025754 Vanilla planifolia HOM05D007345 ORTHO05D009277 8.9e-57 224.6 210 53.3
Nn4g24918 Nelumbo nucifera HOM05D007345 ORTHO05D009277 7.8e-53 211.5 196 55.6
PGSC0003DMG400010180 Solanum tuberosum HOM05D007345 ORTHO05D009277 1.5e-51 207.2 335 39.1
Zm00001eb066530 Zea mays HOM05D007345 ORTHO05D009277 1.5e-51 207.2 216 48.6
Ah.09g231730 Amaranthus hybridus HOM05D007345 ORTHO05D009277 2.1e-50 203.4 230 50.0
Os04g0674100 Oryza sativa ssp. japonica HOM05D007345 ORTHO05D009277 8.1e-50 201.4 215 48.4
ATR0618G142 Amborella trichopoda HOM05D007345 ORTHO05D009277 4.0e-49 199.1 226 49.1
DCAR_023255 Daucus carota HOM05D007345 ORTHO05D009277 1.3e-47 194.1 184 54.9
Pp3c11_25980 Physcomitrium patens HOM05D007345 ORTHO05D009277 3.8e-47 192.6 243 40.7
ECA240G0690 Erigeron canadensis HOM05D007345 ORTHO05D009277 3.2e-46 189.5 176 56.2
FAN13G2172 Fragaria x ananassa HOM05D007345 ORTHO05D009277 2.7e-45 186.4 151 66.9
Mapoly0014s0070 Marchantia polymorpha HOM05D007345 ORTHO05D009277 6.0e-45 185.3 210 43.8
vmacro16392 Vaccinium macrocarpon HOM05D007345 ORTHO05D009277 4.3e-43 179.1 408 31.4
CBR_g52222 Chara braunii HOM05D007345 ORTHO05D009277 1.8e-41 173.7 220 40.0
PSO063G1698 Papaver somniferum HOM05D007345 ORTHO05D009277 4.0e-41 172.6 250 42.4
SMO352G0035 Selaginella moellendorffii HOM05D007345 ORTHO05D009277 6.9e-41 171.8 218 40.8
AagrBONN_evm.TU.Sc2ySwM_117.2683 Anthoceros agrestis HOM05D007345 ORTHO05D009277 3.0e-36 156.4 162 46.9
CAN.G1635.20 Capsicum annuum HOM05D007345 ORTHO05D009277 3.9e-36 156.0 211 45.0
Psat7g000360 Pisum sativum HOM05D007345 ORTHO05D009277 5.1e-36 155.6 141 57.4
SEGI_13495 Sequoiadendron giganteum HOM05D007345 ORTHO05D009277 1.9e-35 153.7 176 47.2
Lj9C350T12 Lonicera japonica HOM05D000001 ORTHO05D009373 5.6e-35 152.1 156 54.5
Zm00001eb184330 Zea mays HOM05D007345 ORTHO05D009277 3.8e-31 139.4 160 45.6
Eucgr.H00622 Eucalyptus grandis HOM05D007345 ORTHO05D009277 1.9e-27 127.1 96 60.4
MSTRG.9709 Avicennia marina HOM05D007345 ORTHO05D009277 7.4e-27 125.2 145 47.6
Cre16.g674534 Chlamydomonas reinhardtii HOM05D007345 ORTHO05D009277 5.5e-22 109.0 202 32.2
PRCOL_00001636 Prasinoderma coloniale HOM05D007345 ORTHO05D009277 3.3e-11 73.2 55 56.4
ECA238G4657 Erigeron canadensis HOM05D006295 ORTHO05D008061 6.9e-09 65.5 91 40.7
AL1G23580 Arabidopsis lyrata HOM05D002462 ORTHO05D002893 3.4e-08 63.2 126 28.6
Hund22393 Selenicereus undatus HOM05D007345 ORTHO05D009277 3.4e-08 63.2 48 60.4
AL1G23570 Arabidopsis lyrata HOM05D002462 ORTHO05D002893 1.4e-06 57.8 88 30.7


User provided reference genes

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