Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0020385 Sechium edule HOM05D005575 ORTHO05D007355 3.0e-257 891.3 453 100.0
MELO3C006485.2 Cucumis melo HOM05D005575 ORTHO05D007355 1.5e-235 819.3 458 91.5
CsaV3_3G012740 Cucumis sativus L. HOM05D005575 ORTHO05D007355 1.8e-233 812.4 458 91.0
ClCG05G004730 Citrullus lanatus HOM05D005575 ORTHO05D007355 2.2e-231 805.4 458 90.2
Cfa008407 Carpinus fangiana HOM05D005575 ORTHO05D007355 8.6e-212 740.3 461 82.6
Haze_11258 Corylus avellana HOM05D005575 ORTHO05D007355 1.2e-208 729.9 461 81.6
CANSAT78G2185 Cannabis sativa HOM05D005575 ORTHO05D007355 9.8e-208 726.9 459 81.5
CiPaw.01G193100 Carya illinoinensis HOM05D005575 ORTHO05D007355 1.8e-206 722.6 461 80.0
GSVIVG01018083001 Vitis vinifera HOM05D005575 ORTHO05D007355 1.1e-203 713.4 459 79.1
Eucgr.H03187 Eucalyptus grandis HOM05D005575 ORTHO05D007355 7.3e-203 710.7 456 78.1
Prupe.1G025500 Prunus persica HOM05D005575 ORTHO05D007355 1.2e-202 709.9 467 79.9
TWI53G0136 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 1.6e-202 709.5 461 78.5
Manes.03G170700 Manihot esculenta HOM05D005575 ORTHO05D007355 2.8e-202 708.8 461 78.7
Dinv44604 Davidia involucrata HOM05D005575 ORTHO05D007355 4.0e-201 704.9 462 78.6
Actinidia08453 Actinidia chinensis HOM05D005575 ORTHO05D007355 5.2e-201 704.5 461 76.6
Nn3g19479 Nelumbo nucifera HOM05D005575 ORTHO05D007355 2.6e-200 702.2 460 78.5
Manes.15G034800 Manihot esculenta HOM05D005575 ORTHO05D007355 9.8e-200 700.3 461 77.7
Phvul.007G279400 Phaseolus vulgaris HOM05D005575 ORTHO05D007355 2.9e-199 698.7 461 77.7
VMungo0720G2094 Vigna mungo HOM05D005575 ORTHO05D007355 3.7e-199 698.4 461 77.4
Lj6g0016373 Lotus japonicus HOM05D005575 ORTHO05D007355 8.3e-199 697.2 464 77.6
Glyma.02G001600 Glycine max HOM05D005575 ORTHO05D007355 2.4e-198 695.7 461 77.4
QL06p000355 Quercus lobata HOM05D005575 ORTHO05D007355 3.2e-198 695.3 468 77.6
Ca_01767_v3 Cicer arietinum L. HOM05D005575 ORTHO05D007355 5.4e-198 694.5 461 76.8
ECA240G2677 Erigeron canadensis HOM05D005575 ORTHO05D007355 9.2e-198 693.7 460 75.7
Thecc.04G242000 Theobroma cacao HOM05D005575 ORTHO05D007355 9.2e-198 693.7 461 75.5
TWI09G0420 Tripterygium wilfordii HOM05D005575 ORTHO05D007355 9.2e-198 693.7 453 77.3
Dinv14070 Davidia involucrata HOM05D005575 ORTHO05D007355 3.5e-197 691.8 461 76.8
Lalb_Chr01g0020841 Lupinus albus HOM05D005575 ORTHO05D007355 1.0e-196 690.3 463 77.1
PSO461G0077 Papaver somniferum HOM05D005575 ORTHO05D007355 5.0e-196 688.0 455 76.0
Psat6g136600 Pisum sativum HOM05D005575 ORTHO05D007355 8.6e-196 687.2 461 76.4
COL.COLO4_13167 Corchorus olitorius HOM05D005575 ORTHO05D007355 1.5e-195 686.4 461 74.4
Potri.008G159900 Populus trichocarpa HOM05D005575 ORTHO05D007355 1.5e-195 686.4 455 78.2
Glyma.10G001900 Glycine max HOM05D005575 ORTHO05D007355 4.3e-195 684.9 461 76.4
PSO210G5698 Papaver somniferum HOM05D005575 ORTHO05D007355 4.3e-195 684.9 455 75.8
Cc03_g04530 Coffea canephora HOM05D005575 ORTHO05D007355 7.3e-195 684.1 462 74.0
CSS0022244 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 1.2e-194 683.3 460 76.3
Medtr1g041115 Medicago truncatula HOM05D005575 ORTHO05D007355 1.2e-194 683.3 461 75.1
Lsat_1_v5_gn_3_124080 Lactuca sativa HOM05D005575 ORTHO05D007355 2.1e-194 682.6 449 77.7
HanXRQChr13g0423561 Helianthus annuus HOM05D005575 ORTHO05D007355 2.8e-194 682.2 455 76.3
CSS0045755 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 3.6e-194 681.8 460 76.1
COL.COLO4_26929 Corchorus olitorius HOM05D005575 ORTHO05D007355 3.6e-194 681.8 461 74.2
Duzib052G1036 Durio zibethinus HOM05D005575 ORTHO05D007355 2.3e-193 679.1 461 74.6
Ciclev10004932m.g Citrus clementina HOM05D005575 ORTHO05D007355 3.1e-193 678.7 460 76.1
MD16G1218200 Malus domestica HOM05D005575 ORTHO05D007355 2.6e-192 675.6 425 80.7
Atru.chr4.2312 Acer truncatum HOM05D005575 ORTHO05D007355 3.4e-192 675.2 462 75.3
BcaC05g27989 Brassica carinata HOM05D005575 ORTHO05D007355 4.4e-192 674.9 459 73.6
C05p40000 Brassica napus HOM05D005575 ORTHO05D007355 4.4e-192 674.9 459 73.6
BolC5t32746H Brassica oleracea HOM05D005575 ORTHO05D007355 4.4e-192 674.9 459 73.6
BraA05t21452Z Brassica rapa HOM05D005575 ORTHO05D007355 9.9e-192 673.7 460 74.1
Gohir.A10G117000 Gossypium hirsutum HOM05D005575 ORTHO05D007355 1.3e-191 673.3 460 73.7
Gorai.011G167300 Gossypium raimondii HOM05D005575 ORTHO05D007355 1.7e-191 672.9 462 74.2
Nitab4.5_0012347g0010 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.2e-191 672.5 462 73.4
Sabra08G0121800 Salix brachista HOM05D005575 ORTHO05D007355 2.2e-191 672.5 482 73.2
MD13G1203000 Malus domestica HOM05D005575 ORTHO05D007355 2.9e-191 672.2 425 80.7
arahy.Tifrunner.gnm1.ann1.0U5UXQ Arachis hypogaea HOM05D005575 ORTHO05D007355 4.9e-191 671.4 465 74.8
A05p25710 Brassica napus HOM05D005575 ORTHO05D007355 8.3e-191 670.6 460 73.7
Gohir.D10G150300 Gossypium hirsutum HOM05D005575 ORTHO05D007355 8.3e-191 670.6 462 73.8
Oeu064221.1 Olea europaea HOM05D005575 ORTHO05D007355 2.4e-190 669.1 479 71.2
CARHR098930 Cardamine hirsuta HOM05D005575 ORTHO05D007355 3.2e-190 668.7 461 72.5
Rhsim02G0032000 Rhododendron simsii HOM05D005575 ORTHO05D007355 4.1e-190 668.3 457 76.4
arahy.Tifrunner.gnm1.ann1.XPT1GW Arachis hypogaea HOM05D005575 ORTHO05D007355 9.2e-190 667.2 466 74.7
PGR004G2878 Punica granatum HOM05D005575 ORTHO05D007355 2.1e-189 666.0 468 72.4
Aa31LG8G9490 Aethionema arabicum HOM05D005575 ORTHO05D007355 3.5e-189 665.2 464 72.6
BcaB06g26421 Brassica carinata HOM05D005575 ORTHO05D007355 6.0e-189 664.5 461 72.5
TPR.G32768 Trifolium pratense HOM05D005575 ORTHO05D007355 2.3e-188 662.5 441 76.0
Thhalv10020692m.g Eutrema salsugineum HOM05D005575 ORTHO05D007355 3.0e-188 662.1 461 72.5
Duzib151G0571 Durio zibethinus HOM05D005575 ORTHO05D007355 5.1e-188 661.4 459 72.8
MSTRG.24710 Avicennia marina HOM05D005575 ORTHO05D007355 1.5e-187 659.8 467 72.2
Sp3g20680 Schrenkiella parvula HOM05D005575 ORTHO05D007355 3.3e-187 658.7 461 72.5
Carub.0003s2315 Capsella rubella HOM05D005575 ORTHO05D007355 4.3e-187 658.3 459 72.3
Nitab4.5_0000941g0050 Nicotiana tabacum HOM05D005575 ORTHO05D007355 4.3e-187 658.3 464 72.2
CSS0047423 Camellia sinensis var. sinensis HOM05D005575 ORTHO05D007355 4.7e-186 654.8 469 73.1
RcHm_v2.0_Chr4g0388931 Rosa chinensis HOM05D005575 ORTHO05D007355 4.7e-186 654.8 467 72.6
AL3G37400 Arabidopsis lyrata HOM05D005575 ORTHO05D007355 6.2e-186 654.4 462 71.6
Cpa.g.sc58.3 Carica papaya HOM05D005575 ORTHO05D007355 1.1e-185 653.7 434 77.6
EL10Ac8g19543 Beta vulgaris HOM05D005575 ORTHO05D007355 2.4e-185 652.5 509 68.8
SalBow3G3314 Salvia bowleyana HOM05D005575 ORTHO05D007355 3.1e-185 652.1 468 69.9
Peaxi162Scf00788g00114 Petunia axillaris HOM05D005575 ORTHO05D007355 8.9e-185 650.6 461 71.6
AT3G22990 Arabidopsis thaliana HOM05D005575 ORTHO05D007355 2.0e-184 649.4 461 70.7
Peaxi162Scf00467g00914 Petunia axillaris HOM05D005575 ORTHO05D007355 2.0e-184 649.4 467 72.8
PGSC0003DMG401006082 Solanum tuberosum HOM05D005575 ORTHO05D007355 1.3e-183 646.7 455 72.1
Rhsim04G0195700 Rhododendron simsii HOM05D005575 ORTHO05D007355 2.9e-183 645.6 492 68.3
Sopen03g001350 Solanum pennellii HOM05D005575 ORTHO05D007355 2.9e-183 645.6 469 72.7
Solyc03g005310.4 Solanum lycopersicum HOM05D005575 ORTHO05D007355 4.9e-183 644.8 469 72.7
Solyc09g083000.3 Solanum lycopersicum HOM05D005575 ORTHO05D007355 4.9e-183 644.8 455 72.3
PGSC0003DMG400013391 Solanum tuberosum HOM05D005575 ORTHO05D007355 8.4e-183 644.0 469 72.5
FvH4_4g01960 Fragaria vesca HOM05D005575 ORTHO05D007355 1.9e-182 642.9 465 71.0
Sopen09g031870 Solanum pennellii HOM05D005575 ORTHO05D007355 1.9e-182 642.9 459 71.7
SGA_v2.0_scaffold79G25614 Striga asiatica HOM05D005575 ORTHO05D007355 3.2e-182 642.1 470 69.6
FAN22G1081 Fragaria x ananassa HOM05D005575 ORTHO05D007355 7.8e-181 637.5 463 70.8
Migut.G00397 Erythranthe guttata HOM05D005575 ORTHO05D007355 8.7e-180 634.0 457 71.1
Sc25g0004210 Simmondsia chinensis HOM05D005575 ORTHO05D007355 3.3e-179 632.1 461 70.5
FAN17G2264 Fragaria x ananassa HOM05D005575 ORTHO05D007355 7.3e-179 630.9 487 67.8
Nitab4.5_0000977g0090 Nicotiana tabacum HOM05D005575 ORTHO05D007355 2.1e-178 629.4 466 71.0
Migut.N00227 Erythranthe guttata HOM05D005575 ORTHO05D007355 1.8e-177 626.3 464 68.3
Hund21566 Selenicereus undatus HOM05D005575 ORTHO05D007355 1.8e-177 626.3 463 70.8
HPP92_006286 Vanilla planifolia HOM05D005575 ORTHO05D007355 5.2e-177 624.8 460 68.9
Nitab4.5_0003815g0070 Nicotiana tabacum HOM05D005575 ORTHO05D007355 6.9e-177 624.4 465 70.8
DCAR_030703 Daucus carota HOM05D005575 ORTHO05D007355 5.8e-176 621.3 401 74.6
Os07g0609766 Oryza sativa ssp. japonica HOM05D005575 ORTHO05D007355 4.2e-174 615.1 448 69.0
AUR62034661 Chenopodium quinoa HOM05D005575 ORTHO05D007355 5.4e-174 614.8 420 74.3
CAN.G749.16 Capsicum annuum HOM05D005575 ORTHO05D007355 3.5e-173 612.1 419 73.3
ATR0665G105 Amborella trichopoda HOM05D005575 ORTHO05D007355 1.3e-172 610.1 458 68.1
Zm00001eb183490 Zea mays HOM05D005575 ORTHO05D007355 3.9e-172 608.6 455 67.0
vmacro08393 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 9.0e-169 597.4 398 73.4
vmacro15397 Vaccinium macrocarpon HOM05D005575 ORTHO05D007355 1.5e-163 580.1 415 72.5
SEGI_28733 Sequoiadendron giganteum HOM05D005575 ORTHO05D007355 2.5e-163 579.3 418 68.2
unitig_62.g23259 Utricularia gibba HOM05D005575 ORTHO05D007355 1.6e-162 576.6 460 65.0
SGA_v2.0_scaffold101G29757 Striga asiatica HOM05D005575 ORTHO05D007355 1.1e-161 573.9 461 64.2
AUR62008592 Chenopodium quinoa HOM05D005575 ORTHO05D007355 5.3e-161 571.6 391 74.4
Mapoly0008s0256 Marchantia polymorpha HOM05D005575 ORTHO05D007355 1.2e-141 507.3 400 63.2
Lj3A720G71 Lonicera japonica HOM05D005575 ORTHO05D007355 1.1e-139 500.7 318 79.6
FAN12G1274 Fragaria x ananassa HOM05D005575 ORTHO05D007355 3.3e-139 499.2 380 68.7
SMO230G0018 Selaginella moellendorffii HOM05D005575 ORTHO05D007355 1.1e-134 484.2 409 60.1
AagrBONN_evm.TU.Sc2ySwM_117.635 Anthoceros agrestis HOM05D005575 ORTHO05D007355 1.2e-133 480.7 403 59.3
Pp3c9_410 Physcomitrium patens HOM05D005575 ORTHO05D007355 4.7e-117 425.6 458 51.7
SHI00566 Sapria himalayana HOM05D005575 ORTHO05D007355 1.5e-102 377.5 286 65.7
Pp3c15_1060 Physcomitrium patens HOM05D005575 ORTHO05D007355 1.2e-101 374.4 412 51.2
CBR_g10806 Chara braunii HOM05D005575 ORTHO05D007355 9.8e-99 364.8 558 37.8
Nn1g02522 Nelumbo nucifera HOM05D005575 ORTHO05D007355 2.6e-91 340.1 258 69.0
Actinidia05473 Actinidia chinensis HOM05D005575 ORTHO05D007355 4.6e-80 302.8 188 79.3
BcaC05g25996 Brassica carinata HOM05D005575 ORTHO05D007355 1.3e-74 284.6 267 56.6
BolC5t30651H Brassica oleracea HOM05D005575 ORTHO05D007355 4.2e-65 253.1 247 55.5
C05p19490 Brassica napus HOM05D005575 ORTHO05D007355 9.2e-65 251.9 247 55.1
TAR365G1190 Trochodendron aralioides HOM05D005575 ORTHO05D007355 2.9e-58 230.3 256 55.1
Psat6g163360 Pisum sativum HOM05D005575 ORTHO05D000484 7.9e-48 195.7 145 69.0
TAR365G1076 Trochodendron aralioides HOM05D005575 ORTHO05D007355 1.5e-43 181.4 119 79.0
C08p25570 Brassica napus HOM05D005575 ORTHO05D027690 1.7e-42 177.9 148 63.5
SHI00565 Sapria himalayana HOM05D005575 ORTHO05D007355 4.9e-42 176.4 161 61.5
BolC8t50179H Brassica oleracea HOM05D005575 ORTHO05D027690 1.8e-36 157.9 125 65.6
AagrBONN_evm.TU.Sc2ySwM_344.3391 Anthoceros agrestis HOM05D005575 ORTHO05D007355 2.5e-33 147.5 367 30.0
BcaC07g39513 Brassica carinata HOM05D005575 ORTHO05D027690 2.7e-24 117.5 60 91.7
Psat7g122560 Pisum sativum HOM05D005575 ORTHO05D007355 9.4e-17 92.4 59 72.9
SalBow3G4542 Salvia bowleyana HOM05D005575 ORTHO05D007355 9.4e-17 92.4 57 78.9
Sabra10G0062800 Salix brachista HOM05D005575 ORTHO05D027690 1.4e-15 88.6 69 69.6
Cc06_g23150 Coffea canephora HOM05D005575 ORTHO05D007355 1.2e-08 65.5 65 55.4


User provided reference genes

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