Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 3.2e-62 243.8 120 100.0
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 3.6e-58 230.3 120 92.5
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 1.4e-54 218.4 119 87.4
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 6.0e-53 213.0 119 86.6
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 3.1e-49 200.7 121 81.8
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 5.8e-48 196.4 120 79.2
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 9.9e-48 195.7 120 79.2
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 2.2e-47 194.5 120 73.3
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 8.3e-47 192.6 120 72.5
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 6.0e-45 186.4 120 75.8
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 1.0e-44 185.7 121 74.4
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 6.6e-44 183.0 120 70.8
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 6.6e-44 183.0 120 70.8
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 2.5e-43 181.0 120 73.3
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 3.3e-43 180.6 120 67.5
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 7.3e-43 179.5 120 72.5
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 1.2e-42 178.7 119 70.6
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 6.2e-42 176.4 119 68.1
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 6.2e-42 176.4 120 65.0
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 1.1e-41 175.6 120 65.8
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 1.8e-41 174.9 120 71.7
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 1.8e-41 174.9 120 66.7
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 8.9e-41 172.6 119 67.2
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.2e-40 172.2 119 71.4
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 1.2e-40 172.2 119 71.4
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.0e-40 171.4 120 70.8
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 2.6e-40 171.0 119 71.4
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.6e-40 171.0 119 71.4
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 2.6e-40 171.0 120 67.5
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 7.6e-40 169.5 120 65.8
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 9.9e-40 169.1 122 69.7
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 1.7e-39 168.3 119 68.1
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 3.8e-39 167.2 120 65.0
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 3.8e-39 167.2 122 69.7
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 8.4e-39 166.0 119 64.7
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 8.4e-39 166.0 119 64.7
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 1.1e-38 165.6 122 68.0
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 1.2e-37 162.2 122 66.4
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 1.2e-37 162.2 112 64.3
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 1.7e-36 158.3 120 59.2
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 5.1e-36 156.8 122 64.8
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 1.1e-35 155.6 119 58.0
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 1.5e-35 155.2 113 66.4
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 1.9e-35 154.8 113 66.4
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 2.5e-35 154.5 119 63.9
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 3.3e-35 154.1 121 62.0
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 5.6e-35 153.3 113 61.1
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 7.3e-35 152.9 117 60.7
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 1.6e-34 151.8 117 59.8
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 4.8e-34 150.2 125 60.8
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 8.1e-34 149.4 115 60.0
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 1.8e-33 148.3 113 61.9
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 2.4e-33 147.9 113 61.9
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 3.1e-33 147.5 116 62.1
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 4.0e-33 147.1 117 59.0
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 4.0e-33 147.1 120 57.5
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 1.7e-31 141.7 126 57.9
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 8.4e-31 139.4 119 54.6
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 1.9e-30 138.3 128 54.7
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 2.4e-30 137.9 122 56.6
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 1.6e-29 135.2 121 52.9
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 1.6e-29 135.2 116 55.2
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 2.7e-29 134.4 113 54.9
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 2.7e-29 134.4 121 57.0
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 2.7e-29 134.4 122 54.9
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 3.5e-29 134.0 119 61.3
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 7.9e-29 132.9 123 54.5
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 1.3e-28 132.1 123 54.5
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 1.7e-28 131.7 128 53.1
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 5.1e-28 130.2 127 52.8
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 6.6e-28 129.8 121 54.5
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 6.6e-28 129.8 128 53.1
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 6.6e-28 129.8 128 53.1
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 1.1e-27 129.0 119 51.3
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 1.6e-26 125.2 132 52.3
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 2.4e-25 121.3 115 50.4
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 3.1e-25 120.9 133 51.1
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 5.3e-25 120.2 124 52.4
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 6.9e-25 119.8 126 52.4
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 1.5e-24 118.6 117 52.1
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 2.6e-24 117.9 133 51.1
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 7.6e-24 116.3 124 52.4
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 9.9e-24 115.9 85 61.2
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 2.2e-23 114.8 132 50.8
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 2.9e-23 114.4 131 46.6
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 2.9e-23 114.4 135 47.4
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 1.4e-22 112.1 128 49.2
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 2.4e-22 111.3 130 47.7
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 3.2e-22 110.9 125 48.0
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 5.4e-22 110.2 123 50.4
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 5.4e-22 110.2 123 50.4
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 1.6e-21 108.6 130 48.5
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 6.0e-21 106.7 70 67.1
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 7.9e-21 106.3 127 48.8
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 2.3e-20 104.8 123 48.8
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 3.0e-20 104.4 123 48.8
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 5.6e-19 100.1 71 57.7
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 1.0e-15 89.4 120 39.2
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 1.3e-15 89.0 121 43.8
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 1.7e-15 88.6 120 39.2
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 2.5e-14 84.7 96 46.9
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 7.1e-14 83.2 108 43.5
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 3.4e-08 64.3 43 65.1


User provided reference genes

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