Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0019890 Sechium edule HOM05D001061 ORTHO05D014109 3.8e-181 638.3 378 100.0
Sed0018816 Sechium edule HOM05D001061 ORTHO05D007103 2.1e-09 67.8 38 89.5
ClCG11G002520 Citrullus lanatus HOM05D001061 ORTHO05D007103 4.6e-09 66.6 54 63.0
MELO3C004552.2 Cucumis melo HOM05D001061 ORTHO05D007103 3.0e-08 63.9 38 81.6
CsaV3_2G002320 Cucumis sativus L. HOM05D001061 ORTHO05D007103 8.7e-08 62.4 38 78.9
Carub.0003s2480 Capsella rubella HOM05D001061 ORTHO05D007103 1.1e-07 62.0 38 78.9
arahy.Tifrunner.gnm1.ann1.9ST7G9 Arachis hypogaea HOM05D001061 ORTHO05D007103 1.9e-07 61.2 64 59.4
AL3G39960 Arabidopsis lyrata HOM05D001061 ORTHO05D007103 2.5e-07 60.8 38 76.3
AT3G24495 Arabidopsis thaliana HOM05D001061 ORTHO05D007103 2.5e-07 60.8 38 76.3
BcaB04g20386 Brassica carinata HOM05D001061 ORTHO05D007103 2.5e-07 60.8 38 76.3
A01p30870 Brassica napus HOM05D001061 ORTHO05D007103 2.5e-07 60.8 38 76.3
A07p08120 Brassica napus HOM05D001061 ORTHO05D014109 2.5e-07 60.8 38 76.3
A09p55030 Brassica napus HOM05D001061 ORTHO05D014109 2.5e-07 60.8 38 76.3
C01p39230 Brassica napus HOM05D001061 ORTHO05D007103 2.5e-07 60.8 38 76.3
BolC1t03872H Brassica oleracea HOM05D001061 ORTHO05D007103 2.5e-07 60.8 38 76.3
BraA01t03215Z Brassica rapa HOM05D001061 ORTHO05D007103 2.5e-07 60.8 38 76.3
BraA09t35717Z Brassica rapa HOM05D002113 ORTHO05D002124 2.5e-07 60.8 38 76.3
BraA09t42048Z Brassica rapa HOM05D001061 ORTHO05D014109 2.5e-07 60.8 38 76.3
Thhalv10002887m.g Eutrema salsugineum HOM05D001061 ORTHO05D007103 2.5e-07 60.8 38 76.3
CiPaw.03G233800 Carya illinoinensis HOM05D001061 ORTHO05D007103 4.3e-07 60.1 35 82.9
Sp3g22270 Schrenkiella parvula HOM05D001061 ORTHO05D007103 5.6e-07 59.7 38 73.7
THA.LOC104804581 Tarenaya hassleriana HOM05D001061 ORTHO05D007103 5.6e-07 59.7 38 73.7
AUR62011008 Chenopodium quinoa HOM05D001061 ORTHO05D007103 9.6e-07 58.9 39 76.9
AUR62021519 Chenopodium quinoa HOM05D001061 ORTHO05D007103 9.6e-07 58.9 39 74.4
Duzib187G1842 Durio zibethinus HOM05D001061 ORTHO05D007103 9.6e-07 58.9 35 82.9
Thecc.09G112600 Theobroma cacao HOM05D001061 ORTHO05D007103 9.6e-07 58.9 35 82.9
Manes.03G019100 Manihot esculenta HOM05D001061 ORTHO05D007103 1.6e-06 58.2 35 82.9
Potri.006G156314 Populus trichocarpa HOM05D001061 ORTHO05D007103 1.6e-06 58.2 35 80.0
Potri.006G159200 Populus trichocarpa HOM05D001061 ORTHO05D007103 1.6e-06 58.2 35 80.0
MD15G1187500 Malus domestica HOM05D001061 ORTHO05D007103 2.1e-06 57.8 35 80.0
QL02p085695 Quercus lobata HOM05D001061 ORTHO05D007103 2.1e-06 57.8 35 80.0
RcHm_v2.0_Chr2g0090761 Rosa chinensis HOM05D001061 ORTHO05D007103 2.1e-06 57.8 35 80.0
Sabra06G0125100 Salix brachista HOM05D001061 ORTHO05D007103 2.1e-06 57.8 51 58.8
Ah.14g081830 Amaranthus hybridus HOM05D001061 ORTHO05D007103 2.8e-06 57.4 39 71.8
Cfa003275 Carpinus fangiana HOM05D001061 ORTHO05D007103 3.6e-06 57.0 35 80.0
Aa31LG8G11230 Aethionema arabicum HOM05D001061 ORTHO05D007103 4.8e-06 56.6 38 68.4
EL10Ac8g18512 Beta vulgaris HOM05D001061 ORTHO05D007103 4.8e-06 56.6 39 71.8
arahy.Tifrunner.gnm1.ann1.JX0W3T Arachis hypogaea HOM05D001061 ORTHO05D007103 6.2e-06 56.2 38 73.7
FvH4_1g05130 Fragaria vesca HOM05D001061 ORTHO05D007103 6.2e-06 56.2 35 77.1
FAN19G2497 Fragaria x ananassa HOM05D001061 ORTHO05D007103 6.2e-06 56.2 35 77.1
FAN26G1132 Fragaria x ananassa HOM05D001061 ORTHO05D007103 6.2e-06 56.2 35 77.1
FAN26G2007 Fragaria x ananassa HOM05D001061 ORTHO05D007103 6.2e-06 56.2 35 77.1
Prupe.7G228900 Prunus persica HOM05D001061 ORTHO05D007103 6.2e-06 56.2 35 80.0
TWI34G0314 Tripterygium wilfordii HOM05D001061 ORTHO05D007103 6.2e-06 56.2 35 80.0
COL.COLO4_34897 Corchorus olitorius HOM05D001061 ORTHO05D007103 8.1e-06 55.8 44 70.5


User provided reference genes

Program Settings