Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0018318 Sechium edule HOM05D006316 ORTHO05D008032 3.6e-132 474.9 241 100.0
CsaV3_3G015610 Cucumis sativus L. HOM05D006316 ORTHO05D008032 3.6e-124 448.4 241 92.9
MELO3C006760.2 Cucumis melo HOM05D006316 ORTHO05D008032 3.0e-123 445.3 241 92.1
ClCG05G006940 Citrullus lanatus HOM05D006316 ORTHO05D008032 7.5e-122 440.7 253 88.5
CiPaw.01G127100 Carya illinoinensis HOM05D006316 ORTHO05D008032 7.7e-111 404.1 241 82.2
CSS0037556 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 2.9e-110 402.1 237 81.9
CSS0049495 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 1.5e-109 399.8 237 81.4
Actinidia24554 Actinidia chinensis HOM05D006316 ORTHO05D008032 7.3e-109 397.5 238 81.5
QL06p014723 Quercus lobata HOM05D006316 ORTHO05D008032 9.5e-109 397.1 240 81.2
Cc07_g19930 Coffea canephora HOM05D006316 ORTHO05D008032 1.6e-108 396.4 233 82.4
GSVIVG01017710001 Vitis vinifera HOM05D006316 ORTHO05D008032 3.6e-108 395.2 240 79.6
Duzib128G0584 Durio zibethinus HOM05D006316 ORTHO05D008032 1.0e-107 393.7 241 80.1
Glyma.13G117200 Glycine max HOM05D006316 ORTHO05D008032 1.0e-107 393.7 241 80.9
DCAR_002560 Daucus carota HOM05D006316 ORTHO05D008032 1.8e-107 392.9 231 82.3
Migut.B00749 Erythranthe guttata HOM05D006316 ORTHO05D008032 1.8e-107 392.9 233 82.8
PGR031G3724 Punica granatum HOM05D006316 ORTHO05D008032 1.8e-107 392.9 241 79.3
Manes.05G122900 Manihot esculenta HOM05D006316 ORTHO05D008032 2.3e-107 392.5 241 79.7
VMungo1215G0091 Vigna mungo HOM05D006316 ORTHO05D008032 3.0e-107 392.1 241 80.5
TWI74G1230 Tripterygium wilfordii HOM05D006316 ORTHO05D008032 5.2e-107 391.3 235 81.3
MSTRG.20325 Avicennia marina HOM05D006316 ORTHO05D008032 6.8e-107 391.0 233 80.3
CAN.G255.2 Capsicum annuum HOM05D006316 ORTHO05D008032 8.9e-107 390.6 232 81.5
Thhalv10021423m.g Eutrema salsugineum HOM05D006316 ORTHO05D008032 1.2e-106 390.2 241 78.8
Carub.0003s1730 Capsella rubella HOM05D006316 ORTHO05D008032 1.5e-106 389.8 241 80.1
Haze_00749 Corylus avellana HOM05D006316 ORTHO05D008032 1.5e-106 389.8 220 86.8
SalBow7G1663 Salvia bowleyana HOM05D006316 ORTHO05D008032 1.5e-106 389.8 233 81.1
Phvul.003G124500 Phaseolus vulgaris HOM05D006316 ORTHO05D008032 2.0e-106 389.4 241 79.3
Sp3g15720 Schrenkiella parvula HOM05D006316 ORTHO05D008032 2.0e-106 389.4 241 78.4
Eucgr.B02199 Eucalyptus grandis HOM05D006316 ORTHO05D008032 2.6e-106 389.0 241 77.2
arahy.Tifrunner.gnm1.ann1.NEV66G Arachis hypogaea HOM05D006316 ORTHO05D008032 5.7e-106 387.9 241 78.4
arahy.Tifrunner.gnm1.ann1.ZN6V8N Arachis hypogaea HOM05D006316 ORTHO05D008032 5.7e-106 387.9 241 78.4
CARHR092900 Cardamine hirsuta HOM05D006316 ORTHO05D008032 5.7e-106 387.9 241 78.4
Lj4g0011706 Lotus japonicus HOM05D006316 ORTHO05D008032 7.5e-106 387.5 241 79.3
Gohir.D05G000900 Gossypium hirsutum HOM05D006316 ORTHO05D008032 9.8e-106 387.1 241 76.8
Gorai.009G000800 Gossypium raimondii HOM05D006316 ORTHO05D008032 9.8e-106 387.1 241 76.8
AT3G17590 Arabidopsis thaliana HOM05D006316 ORTHO05D008032 1.3e-105 386.7 241 78.4
Nn4g25293 Nelumbo nucifera HOM05D006316 ORTHO05D008032 1.3e-105 386.7 241 78.0
AL3G30660 Arabidopsis lyrata HOM05D006316 ORTHO05D008032 2.2e-105 386.0 241 78.8
Lsat_1_v5_gn_6_117760 Lactuca sativa HOM05D006316 ORTHO05D008032 2.2e-105 386.0 231 79.7
Medtr4g124260 Medicago truncatula HOM05D006316 ORTHO05D008032 3.7e-105 385.2 241 78.0
Gohir.A05G000600 Gossypium hirsutum HOM05D006316 ORTHO05D008032 4.9e-105 384.8 241 76.3
Aa31LG8G4460 Aethionema arabicum HOM05D006316 ORTHO05D008032 8.3e-105 384.0 241 77.6
BcaB06g25834 Brassica carinata HOM05D006316 ORTHO05D008032 8.3e-105 384.0 241 77.6
MD13G1137100 Malus domestica HOM05D006316 ORTHO05D008032 1.1e-104 383.6 241 76.8
Ciclev10005749m.g Citrus clementina HOM05D006316 ORTHO05D008032 2.4e-104 382.5 241 77.6
Lalb_Chr12g0200491 Lupinus albus HOM05D006316 ORTHO05D008032 3.2e-104 382.1 247 77.3
Peaxi162Scf00571g00412 Petunia axillaris HOM05D006316 ORTHO05D008032 3.2e-104 382.1 242 77.7
Atru.chr4.3188 Acer truncatum HOM05D006316 ORTHO05D008032 1.2e-103 380.2 241 76.3
C05p48790 Brassica napus HOM05D006316 ORTHO05D008032 1.2e-103 380.2 241 76.3
BolC5t33616H Brassica oleracea HOM05D006316 ORTHO05D008032 1.2e-103 380.2 241 76.3
Lj6A704G50 Lonicera japonica HOM05D006316 ORTHO05D008032 1.2e-103 380.2 241 75.5
Nitab4.5_0000051g0260 Nicotiana tabacum HOM05D006316 ORTHO05D008032 1.6e-103 379.8 237 79.7
BcaC05g28772 Brassica carinata HOM05D006316 ORTHO05D008032 2.0e-103 379.4 241 76.3
A05p32260 Brassica napus HOM05D006316 ORTHO05D008032 2.0e-103 379.4 235 78.3
BraA05t22055Z Brassica rapa HOM05D006316 ORTHO05D008032 5.9e-103 377.9 235 77.9
CANSAT56G2492 Cannabis sativa HOM05D006316 ORTHO05D008032 5.9e-103 377.9 243 77.0
Sopen11g008410 Solanum pennellii HOM05D006316 ORTHO05D008032 1.0e-102 377.1 238 79.4
TAR365G1184 Trochodendron aralioides HOM05D006316 ORTHO05D008032 1.0e-102 377.1 264 73.9
Hund12266 Selenicereus undatus HOM05D006316 ORTHO05D008032 1.3e-102 376.7 241 76.3
Nitab4.5_0004737g0050 Nicotiana tabacum HOM05D006316 ORTHO05D008032 3.0e-102 375.6 237 78.9
Potri.010G004100 Populus trichocarpa HOM05D006316 ORTHO05D008032 3.0e-102 375.6 241 76.3
vmacro04190 Vaccinium macrocarpon HOM05D006316 ORTHO05D008032 3.9e-102 375.2 261 71.6
Ah.07g202850 Amaranthus hybridus HOM05D006316 ORTHO05D008032 5.0e-102 374.8 241 75.1
COL.COLO4_13438 Corchorus olitorius HOM05D006316 ORTHO05D008032 1.1e-101 373.6 236 77.1
PSO761G0163 Papaver somniferum HOM05D006316 ORTHO05D008032 1.1e-101 373.6 241 77.2
EL10Ac3g06220 Beta vulgaris HOM05D006316 ORTHO05D008032 1.5e-101 373.2 241 75.1
unitig_578.g15959 Utricularia gibba HOM05D006316 ORTHO05D008032 1.5e-101 373.2 243 75.3
AUR62002525 Chenopodium quinoa HOM05D006316 ORTHO05D008032 1.9e-101 372.9 241 75.9
Gohir.A09G135800 Gossypium hirsutum HOM05D006316 ORTHO05D008032 1.9e-101 372.9 238 74.8
PSO210G4075 Papaver somniferum HOM05D006316 ORTHO05D008032 2.5e-101 372.5 241 77.2
SGA_v2.0_scaffold131G34373 Striga asiatica HOM05D006316 ORTHO05D008032 3.3e-101 372.1 263 71.9
Aqoxy2G02444 Aquilegia oxysepala HOM05D006316 ORTHO05D008032 4.3e-101 371.7 241 75.5
HanXRQChr05g0148931 Helianthus annuus HOM05D006316 ORTHO05D008032 8.0e-100 367.5 226 77.9
ECA246G2315 Erigeron canadensis HOM05D006316 ORTHO05D008032 7.5e-98 360.9 224 78.6
ATR0796G033 Amborella trichopoda HOM05D006316 ORTHO05D008032 9.8e-98 360.5 239 72.0
TPR.G12708 Trifolium pratense HOM05D006316 ORTHO05D008032 1.7e-97 359.8 223 77.1
Gohir.D09G137500 Gossypium hirsutum HOM05D006316 ORTHO05D008032 2.9e-97 359.0 261 68.2
Cfa015754 Carpinus fangiana HOM05D006316 ORTHO05D008032 4.6e-95 351.7 209 82.8
CSS0010190 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 6.0e-95 351.3 234 75.6
CDE12G0513 Ceratophyllum demersum HOM05D006316 ORTHO05D008032 1.0e-94 350.5 240 69.2
RcHm_v2.0_Chr4g0428001 Rosa chinensis HOM05D006316 ORTHO05D008032 1.3e-94 350.1 228 74.1
FvH4_4g21770 Fragaria vesca HOM05D006316 ORTHO05D008032 2.3e-94 349.4 228 74.1
Thecc.03G258800 Theobroma cacao HOM05D006316 ORTHO05D008032 5.0e-94 348.2 241 73.0
FAN17G2953 Fragaria x ananassa HOM05D006316 ORTHO05D008032 6.6e-94 347.8 228 73.7
Sopen11g008420 Solanum pennellii HOM05D006316 ORTHO05D008032 4.3e-93 345.1 238 72.3
THA.LOC104826519 Tarenaya hassleriana HOM05D006316 ORTHO05D008032 9.5e-93 344.0 210 81.9
Psat4g020720 Pisum sativum HOM05D006316 ORTHO05D008032 4.7e-92 341.7 241 71.0
Sabra10G0003500 Salix brachista HOM05D006316 ORTHO05D008032 3.1e-91 339.0 282 62.8
FAN12G0215 Fragaria x ananassa HOM05D006316 ORTHO05D008032 1.5e-90 336.7 250 67.6
FAN07G2419 Fragaria x ananassa HOM05D006316 ORTHO05D008032 4.9e-89 331.6 259 64.9
Gorai.006G157900 Gossypium raimondii HOM05D006316 ORTHO05D008032 1.5e-82 310.1 232 66.8
Prupe.1G208100 Prunus persica HOM05D006316 ORTHO05D008032 3.4e-82 308.9 196 76.5
Solyc11g013400.3 Solanum lycopersicum HOM05D006316 ORTHO05D008032 1.9e-80 303.1 196 78.1
Rhsim13G0235700 Rhododendron simsii HOM05D006316 ORTHO05D008032 2.4e-80 302.8 275 59.6
Dinv32178 Davidia involucrata HOM05D006316 ORTHO05D008032 7.8e-79 297.7 241 65.1
Zm00001eb354530 Zea mays HOM05D006316 ORTHO05D008032 7.8e-79 297.7 233 61.8
Os02g0723700 Oryza sativa ssp. japonica HOM05D006316 ORTHO05D008032 1.0e-78 297.4 226 63.3
TAR362G1307 Trochodendron aralioides HOM05D006316 ORTHO05D008032 2.3e-78 296.2 192 75.0
SHI09041 Sapria himalayana HOM05D006316 ORTHO05D008032 6.6e-78 294.7 211 69.2
Sc19g0002500 Simmondsia chinensis HOM05D006316 ORTHO05D008032 1.6e-71 273.5 177 76.3
AUR62023666 Chenopodium quinoa HOM05D006316 ORTHO05D008032 2.1e-71 273.1 306 51.0
Mapoly0059s0054 Marchantia polymorpha HOM05D006316 ORTHO05D008032 1.3e-70 270.4 240 54.2
Rhsim04G0168500 Rhododendron simsii HOM05D006316 ORTHO05D008032 2.5e-69 266.2 196 68.9
SMO358G0571 Selaginella moellendorffii HOM05D006316 ORTHO05D008032 1.2e-66 257.3 220 55.9
Lj2g0021665 Lotus japonicus HOM05D006316 ORTHO05D008032 1.2e-63 247.3 229 58.1
HPP92_002633 Vanilla planifolia HOM05D006316 ORTHO05D008032 1.7e-62 243.4 160 72.5
AagrBONN_evm.TU.Sc2ySwM_228.3212 Anthoceros agrestis HOM05D006316 ORTHO05D008032 8.1e-60 234.6 225 50.7
LjContig00575g0004232 Lotus japonicus HOM05D006316 ORTHO05D008032 1.4e-59 233.8 186 64.0
LjContig00576g0014419 Lotus japonicus HOM05D006316 ORTHO05D008032 1.4e-59 233.8 186 64.0
Lj2g0021371 Lotus japonicus HOM05D006316 ORTHO05D008032 1.5e-58 230.3 156 72.4
Rhsim04G0168300 Rhododendron simsii HOM05D006316 ORTHO05D008032 1.7e-57 226.9 196 62.2
CBR_g38190 Chara braunii HOM05D006316 ORTHO05D008032 1.3e-54 217.2 223 47.5
Ca_21361_v3 Cicer arietinum L. HOM05D006316 ORTHO05D008032 7.4e-45 184.9 123 74.0
SEGI_01321 Sequoiadendron giganteum HOM05D006316 ORTHO05D008032 2.2e-41 173.3 128 68.0
Glyma.09G159500 Glycine max HOM05D006316 ORTHO05D008032 3.7e-36 156.0 163 53.4
PGSC0003DMG400027786 Solanum tuberosum HOM05D006316 ORTHO05D008032 3.1e-35 152.9 122 63.1
CSS0015998 Camellia sinensis var. sinensis HOM05D006316 ORTHO05D008032 7.2e-32 141.7 93 73.1
Glyma.17G042702 Glycine max HOM05D006316 ORTHO05D008032 2.2e-28 130.2 78 78.2
Cpa.g.sc146.8 Carica papaya HOM05D006316 ORTHO05D008032 2.0e-26 123.6 61 95.1
Solyc11g013410.2 Solanum lycopersicum HOM05D006316 ORTHO05D008032 2.2e-25 120.2 75 77.3
MBI18_g03841_MAGBIO Magnolia biondii HOM05D006046 ORTHO05D007580 2.5e-24 116.7 71 74.6
Cpa.g.c44700 Carica papaya HOM05D006316 ORTHO05D008032 8.2e-20 101.7 55 81.8
DCAR_030416 Daucus carota HOM05D006316 ORTHO05D008032 3.1e-19 99.8 103 59.2
Oeu020629.4 Olea europaea HOM05D002546 ORTHO05D002671 1.9e-16 90.5 69 68.1
Cfa025220 Carpinus fangiana HOM05D006316 ORTHO05D008032 3.3e-13 79.7 152 31.6
RcHm_v2.0_Chr5g0025761 Rosa chinensis HOM05D006316 ORTHO05D008032 5.9e-10 68.9 65 53.8


User provided reference genes

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