Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 4.3e-195 684.5 353 100.0
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 1.9e-145 519.6 331 80.7
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 1.6e-141 506.5 331 77.6
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 2.1e-141 506.1 328 79.0
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 2.9e-122 442.6 342 67.3
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 7.1e-121 438.0 327 69.7
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 9.3e-121 437.6 336 67.9
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 2.7e-120 436.0 319 70.2
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 3.5e-120 435.6 332 68.1
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 3.5e-120 435.6 324 68.8
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 4.6e-120 435.3 317 70.7
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 1.3e-119 433.7 334 67.7
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.3e-119 433.7 317 70.3
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 1.3e-119 433.7 353 64.9
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 2.3e-119 433.0 317 70.0
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.9e-119 432.2 317 69.7
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.9e-119 432.2 317 70.3
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 1.1e-118 430.6 318 68.9
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.5e-118 430.3 317 69.7
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 1.5e-118 430.3 336 68.5
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 3.3e-118 429.1 317 69.7
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 9.6e-118 427.6 318 69.5
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 9.6e-118 427.6 321 69.2
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 2.1e-117 426.4 331 66.2
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 8.1e-117 424.5 331 68.3
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 1.2e-115 420.6 331 66.8
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 2.6e-115 419.5 317 66.2
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 2.9e-114 416.0 318 66.7
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 3.8e-114 415.6 328 66.8
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 3.8e-114 415.6 320 66.6
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 6.4e-114 414.8 328 66.8
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 1.9e-113 413.3 328 66.2
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 9.3e-113 411.0 319 65.5
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 2.3e-111 406.4 320 65.0
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 1.1e-110 404.1 316 66.5
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 1.9e-110 403.3 317 65.6
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 1.9e-110 403.3 329 62.6
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 3.3e-110 402.5 338 60.9
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 9.6e-110 401.0 320 65.0
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 9.6e-110 401.0 321 64.8
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 1.6e-109 400.2 319 64.9
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 2.8e-109 399.4 320 64.4
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 2.8e-109 399.4 324 61.4
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 3.6e-109 399.1 321 66.0
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 4.8e-109 398.7 330 63.3
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 1.1e-108 397.5 317 64.7
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 2.4e-108 396.4 333 61.0
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 1.2e-107 394.0 325 62.5
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 1.5e-107 393.7 317 64.4
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 2.0e-107 393.3 317 63.7
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 5.8e-107 391.7 321 63.9
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 1.7e-106 390.2 317 63.7
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 1.7e-106 390.2 319 62.7
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 8.4e-106 387.9 317 60.3
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 8.4e-106 387.9 317 60.3
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 1.1e-105 387.5 304 65.5
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 1.4e-105 387.1 329 61.4
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 4.2e-105 385.6 317 59.6
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 1.6e-104 383.6 327 60.2
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 2.7e-104 382.9 318 62.3
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 2.7e-104 382.9 317 59.0
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 3.0e-103 379.4 320 61.9
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 3.9e-103 379.0 325 60.6
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 1.1e-102 377.5 317 62.1
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 9.6e-102 374.4 302 63.9
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 2.8e-101 372.9 320 60.6
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 2.8e-101 372.9 319 63.3
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 3.7e-101 372.5 302 64.2
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 4.8e-101 372.1 319 58.3
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 2.4e-100 369.8 318 59.7
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 4.0e-100 369.0 325 58.2
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 2.0e-99 366.7 317 59.0
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 2.0e-99 366.7 317 59.0
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 4.9e-98 362.1 317 58.7
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 4.2e-97 359.0 331 55.9
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 4.2e-97 359.0 320 58.1
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 1.6e-96 357.1 321 59.8
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 2.3e-95 353.2 328 58.2
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 3.9e-95 352.4 320 57.5
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 8.7e-95 351.3 324 56.5
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 5.7e-94 348.6 285 60.0
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 7.4e-94 348.2 266 64.3
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 1.8e-92 343.6 323 55.4
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 5.9e-91 338.6 327 53.8
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 7.6e-91 338.2 327 56.9
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 4.6e-88 328.9 266 63.9
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 1.6e-80 303.9 322 52.8
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 2.1e-80 303.5 239 61.9
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 3.6e-80 302.8 322 51.6
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 7.9e-80 301.6 332 52.1
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 2.3e-79 300.1 316 54.7
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 1.4e-76 290.8 262 54.6
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 1.2e-75 287.7 323 50.5
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 8.5e-74 281.6 283 55.8
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 1.1e-68 264.6 324 47.5
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 9.1e-68 261.5 319 45.8
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 1.8e-63 247.3 191 66.5
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 2.7e-59 233.4 315 45.1
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 3.5e-59 233.0 198 60.6
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 1.7e-58 230.7 186 64.5
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 4.2e-57 226.1 227 56.4
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 2.6e-54 216.9 161 70.2
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 3.0e-47 193.4 201 52.7
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 1.2e-40 171.4 251 44.6
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 2.8e-32 143.7 108 66.7
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 6.8e-31 139.0 108 64.8
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.6e-27 127.9 86 75.6
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 4.7e-24 116.3 270 31.1
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 1.6e-19 101.3 125 43.2
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 6.0e-19 99.4 110 50.9
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 4.4e-14 83.2 82 58.5


User provided reference genes

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