Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 1.5e-272 942.2 460 100.0
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 9.5e-259 896.3 461 94.8
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 5.8e-256 887.1 460 93.5
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 5.0e-252 874.0 460 92.4
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 1.3e-231 806.2 455 84.4
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 4.9e-231 804.3 452 85.0
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 4.9e-231 804.3 448 85.0
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 4.2e-230 801.2 451 83.6
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 4.2e-230 801.2 456 83.6
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 1.2e-229 799.7 462 83.3
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 1.2e-229 799.7 456 83.6
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 3.5e-229 798.1 458 83.6
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 4.6e-229 797.7 455 82.9
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 4.6e-229 797.7 456 83.6
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 7.8e-229 797.0 447 84.8
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.0e-228 796.6 429 87.6
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 3.9e-228 794.7 452 83.8
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 6.6e-228 793.9 453 83.2
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 6.6e-228 793.9 452 83.2
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 3.3e-227 791.6 452 84.3
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 4.3e-227 791.2 457 82.9
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 1.3e-226 789.6 461 82.9
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 1.3e-226 789.6 451 82.5
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 1.3e-226 789.6 437 84.9
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 1.6e-226 789.3 453 82.8
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 3.6e-226 788.1 462 82.0
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 4.8e-226 787.7 454 83.7
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 1.4e-225 786.2 449 83.1
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 1.8e-225 785.8 447 83.2
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 1.8e-225 785.8 458 82.8
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 1.8e-225 785.8 428 86.2
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 3.1e-225 785.0 455 82.6
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 6.9e-225 783.9 445 81.8
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 6.9e-225 783.9 452 82.1
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 6.9e-225 783.9 451 82.5
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 6.9e-225 783.9 447 82.3
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 1.2e-224 783.1 427 86.2
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 1.5e-224 782.7 448 81.5
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 2.0e-224 782.3 453 82.3
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 2.6e-224 781.9 433 85.5
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 3.4e-224 781.6 454 82.2
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 9.9e-224 780.0 459 81.5
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 2.2e-223 778.9 455 81.3
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 2.9e-223 778.5 447 82.6
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 6.4e-223 777.3 426 85.4
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 8.4e-223 776.9 437 83.3
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 1.1e-222 776.5 427 85.7
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 1.1e-222 776.5 480 77.9
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 1.4e-222 776.2 439 83.4
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 1.4e-222 776.2 424 85.8
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 1.9e-222 775.8 457 81.2
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 2.4e-222 775.4 460 82.0
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 2.4e-222 775.4 425 85.4
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 3.2e-222 775.0 455 80.7
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 7.1e-222 773.9 472 80.1
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 7.1e-222 773.9 456 81.6
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.2e-221 773.1 457 81.4
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 1.2e-221 773.1 447 81.4
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 1.6e-221 772.7 431 84.7
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 2.1e-221 772.3 429 84.4
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 2.7e-221 771.9 437 83.1
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 4.6e-221 771.2 438 82.9
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 4.6e-221 771.2 439 82.9
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 6.0e-221 770.8 453 80.4
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 1.3e-220 769.6 432 84.3
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 1.3e-220 769.6 457 80.5
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.8e-218 761.9 425 84.5
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 4.8e-218 761.1 450 80.2
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 6.9e-217 757.3 473 76.3
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 1.5e-216 756.1 442 80.1
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 3.4e-216 755.0 447 79.2
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 5.8e-216 754.2 415 84.6
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 7.1e-214 747.3 418 82.5
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 2.1e-213 745.7 447 80.1
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 1.8e-212 742.7 432 81.9
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 2.1e-210 735.7 453 76.4
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 4.0e-209 731.5 424 79.7
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 3.8e-207 724.9 399 85.2
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 3.8e-207 724.9 426 80.0
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 6.5e-207 724.2 435 78.2
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 6.5e-207 724.2 399 85.0
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 3.2e-206 721.8 428 78.0
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 1.6e-202 709.5 493 71.6
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 6.3e-202 707.6 452 73.2
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 1.4e-201 706.4 427 75.9
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.0e-199 700.3 473 73.4
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.7e-199 699.5 442 75.8
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 1.0e-196 690.3 447 75.6
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 1.9e-195 686.0 379 85.0
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.6e-194 682.9 483 70.6
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 4.8e-194 681.4 398 82.4
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 5.0e-191 671.4 390 81.5
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 1.2e-189 666.8 556 62.9
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 7.4e-187 657.5 441 72.3
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 5.3e-185 651.4 384 80.5
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 2.0e-184 649.4 452 68.1
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 6.1e-181 637.9 355 84.2
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.6e-179 632.5 432 72.5
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 4.1e-169 598.6 424 66.7
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 2.7e-168 595.9 464 62.3
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 1.0e-164 583.9 374 75.9
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 2.7e-157 559.3 489 61.1
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 2.8e-141 506.1 272 86.4
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 4.7e-141 505.4 303 80.9
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 4.0e-140 502.3 272 86.8
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 2.7e-136 489.6 374 62.3
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 5.0e-135 485.3 452 55.8
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 2.5e-118 429.9 253 82.6
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 2.7e-64 250.4 144 78.5
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 2.2e-61 240.7 188 66.0
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.2e-59 235.0 143 76.2
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 4.7e-40 169.9 98 78.6
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 1.4e-28 131.7 79 73.4
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 1.8e-23 114.8 70 77.1
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 3.0e-18 97.4 57 78.9
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 2.1e-16 91.3 49 87.8
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 2.1e-11 74.7 49 67.3
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 3.5e-11 73.9 46 71.7
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 3.0e-10 70.9 42 71.4
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 4.7e-08 63.5 40 77.5


User provided reference genes

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