Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017829 Sechium edule HOM05D002268 ORTHO05D006937 0.0e+00 1081.6 523 100.0
CsaV3_4G024220 Cucumis sativus L. HOM05D002268 ORTHO05D006937 1.3e-267 926.0 542 84.1
MELO3C014598.2 Cucumis melo HOM05D002268 ORTHO05D006937 9.1e-266 919.8 543 83.2
ClCG02G023280 Citrullus lanatus HOM05D002268 ORTHO05D006937 7.7e-265 916.8 565 81.6
GSVIVG01025274001 Vitis vinifera HOM05D002268 ORTHO05D006937 1.5e-223 779.6 476 78.6
Atru.chr3.2733 Acer truncatum HOM05D002268 ORTHO05D006937 6.8e-221 770.8 537 73.2
Prupe.5G028600 Prunus persica HOM05D002268 ORTHO05D006937 8.9e-221 770.4 521 72.9
CiPaw.14G119300 Carya illinoinensis HOM05D002268 ORTHO05D006937 2.2e-219 765.8 530 71.7
Haze_23130 Corylus avellana HOM05D002268 ORTHO05D006937 6.4e-219 764.2 545 71.2
MD03G1176400 Malus domestica HOM05D002268 ORTHO05D006937 1.2e-217 760.0 503 74.4
TWI60G0297 Tripterygium wilfordii HOM05D002268 ORTHO05D006937 1.2e-217 760.0 484 75.2
Nn7g36125 Nelumbo nucifera HOM05D002268 ORTHO05D006937 1.3e-216 756.5 528 71.8
QL01p004788 Quercus lobata HOM05D002268 ORTHO05D006937 1.7e-216 756.1 529 71.1
Cpa.g.sc84.62 Carica papaya HOM05D002268 ORTHO05D006937 1.1e-215 753.4 487 76.2
MD11G1196700 Malus domestica HOM05D002268 ORTHO05D006937 1.5e-215 753.1 451 79.4
arahy.Tifrunner.gnm1.ann1.02894U Arachis hypogaea HOM05D002268 ORTHO05D006937 6.2e-214 747.7 500 74.0
arahy.Tifrunner.gnm1.ann1.8VL3CN Arachis hypogaea HOM05D002268 ORTHO05D006937 8.1e-214 747.3 475 77.1
Ca_11284_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 8.1e-214 747.3 478 75.7
Ca_30227_v3 Cicer arietinum L. HOM05D002268 ORTHO05D006937 8.1e-214 747.3 478 75.7
COL.COLO4_24897 Corchorus olitorius HOM05D002268 ORTHO05D006937 3.1e-213 745.3 432 80.8
Sc16g0011510 Simmondsia chinensis HOM05D002268 ORTHO05D006937 4.0e-213 745.0 440 81.1
Ah.04g161910 Amaranthus hybridus HOM05D002268 ORTHO05D006937 1.3e-211 740.0 529 69.9
Duzib168G2040 Durio zibethinus HOM05D002268 ORTHO05D006937 1.3e-211 740.0 509 72.1
arahy.Tifrunner.gnm1.ann1.VSBS4R Arachis hypogaea HOM05D002268 ORTHO05D006937 1.7e-211 739.6 475 76.2
Lj3g0006923 Lotus japonicus HOM05D002268 ORTHO05D006937 2.2e-211 739.2 414 82.4
Nitab4.5_0006994g0060 Nicotiana tabacum HOM05D002268 ORTHO05D006937 2.2e-211 739.2 472 77.1
arahy.Tifrunner.gnm1.ann1.6XYC84 Arachis hypogaea HOM05D002268 ORTHO05D006937 3.8e-211 738.4 483 75.6
Lalb_Chr19g0138111 Lupinus albus HOM05D002268 ORTHO05D006937 4.9e-211 738.0 498 74.1
PGR102G0832 Punica granatum HOM05D002268 ORTHO05D006937 8.4e-211 737.3 465 76.6
Glyma.11G133500 Glycine max HOM05D002268 ORTHO05D006937 1.4e-210 736.5 483 75.4
arahy.Tifrunner.gnm1.ann1.AYE0CN Arachis hypogaea HOM05D002268 ORTHO05D006937 2.4e-210 735.7 470 76.0
Gorai.009G073000 Gossypium raimondii HOM05D002268 ORTHO05D006937 4.2e-210 734.9 483 74.3
RcHm_v2.0_Chr7g0231131 Rosa chinensis HOM05D002268 ORTHO05D006937 3.5e-209 731.9 545 68.3
Nitab4.5_0005819g0070 Nicotiana tabacum HOM05D002268 ORTHO05D006937 7.8e-209 730.7 464 77.2
Rhsim01G0191500 Rhododendron simsii HOM05D002268 ORTHO05D006937 7.8e-209 730.7 477 76.1
Lj2A631G13 Lonicera japonica HOM05D002268 ORTHO05D006937 1.3e-208 729.9 507 71.8
CAN.G956.10 Capsicum annuum HOM05D002268 ORTHO05D006937 2.3e-208 729.2 431 80.5
Solyc09g074100.4 Solanum lycopersicum HOM05D002268 ORTHO05D006937 2.3e-208 729.2 426 81.2
PGSC0003DMG400003844 Solanum tuberosum HOM05D002268 ORTHO05D006937 3.0e-208 728.8 484 74.2
vmacro19340 Vaccinium macrocarpon HOM05D002268 ORTHO05D006937 3.0e-208 728.8 480 75.6
EL10Ac4g10259 Beta vulgaris HOM05D002268 ORTHO05D006937 5.1e-208 728.0 501 72.1
EL10Ac4g10275 Beta vulgaris HOM05D002268 ORTHO05D006937 5.1e-208 728.0 501 72.1
Potri.001G259000 Populus trichocarpa HOM05D002268 ORTHO05D006937 1.5e-207 726.5 493 73.0
Hma1.2p1_0861F.1_g229700 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 1.9e-207 726.1 465 78.1
Medtr4g065023 Medicago truncatula HOM05D002268 ORTHO05D006937 5.6e-207 724.5 471 75.6
Psat7g212760 Pisum sativum HOM05D002268 ORTHO05D006937 5.6e-207 724.5 478 73.4
AUR62019294 Chenopodium quinoa HOM05D002268 ORTHO05D006937 9.6e-207 723.8 414 82.9
Sopen09g028920 Solanum pennellii HOM05D002268 ORTHO05D006937 1.3e-206 723.4 426 80.5
Aqoxy1G00300 Aquilegia oxysepala HOM05D002268 ORTHO05D006937 2.8e-206 722.2 465 75.3
Gohir.D05G072000 Gossypium hirsutum HOM05D002268 ORTHO05D006937 6.2e-206 721.1 483 72.7
Phvul.011G059600 Phaseolus vulgaris HOM05D002268 ORTHO05D006937 5.3e-205 718.0 472 74.8
DCAR_000723 Daucus carota HOM05D002268 ORTHO05D006937 9.0e-205 717.2 514 68.7
Eucgr.B03681 Eucalyptus grandis HOM05D002268 ORTHO05D006937 4.9e-203 711.4 408 82.6
BcaB02g11231 Brassica carinata HOM05D002268 ORTHO05D006937 8.4e-203 710.7 427 77.5
FAN18G3947 Fragaria x ananassa HOM05D002268 ORTHO05D006937 1.4e-202 709.9 538 67.5
VMungo1127G0743 Vigna mungo HOM05D002268 ORTHO05D006937 1.4e-202 709.9 474 74.3
AL1G59110 Arabidopsis lyrata HOM05D002268 ORTHO05D006937 1.2e-201 706.8 494 70.2
Cc09_g04150 Coffea canephora HOM05D002268 ORTHO05D006937 2.1e-201 706.1 418 80.1
Sp1g37990 Schrenkiella parvula HOM05D002268 ORTHO05D006937 7.9e-201 704.1 420 78.3
CARHR041380 Cardamine hirsuta HOM05D002268 ORTHO05D006937 1.0e-200 703.7 465 73.1
Thhalv10011432m.g Eutrema salsugineum HOM05D002268 ORTHO05D006937 3.9e-200 701.8 424 77.6
AT1G51310 Arabidopsis thaliana HOM05D002268 ORTHO05D006937 8.7e-200 700.7 468 72.4
Carub.0008s0647 Capsella rubella HOM05D002268 ORTHO05D006937 1.1e-199 700.3 491 69.7
Aa31LG10G3500 Aethionema arabicum HOM05D002268 ORTHO05D006937 3.3e-199 698.7 463 73.7
FvH4_5g33050 Fragaria vesca HOM05D002268 ORTHO05D006937 3.3e-199 698.7 486 71.8
PSO384G3396 Papaver somniferum HOM05D002268 ORTHO05D006937 3.3e-199 698.7 498 70.7
Oeu043297.4 Olea europaea HOM05D002268 ORTHO05D006937 5.6e-199 698.0 514 69.3
Carub.0001s4017 Capsella rubella HOM05D002268 ORTHO05D006937 7.4e-199 697.6 492 69.7
ECA238G2081 Erigeron canadensis HOM05D002268 ORTHO05D006937 9.6e-199 697.2 479 71.0
HanXRQChr07g0197481 Helianthus annuus HOM05D002268 ORTHO05D006937 1.6e-198 696.4 473 72.5
PSO339G2995 Papaver somniferum HOM05D002268 ORTHO05D006937 6.2e-198 694.5 523 68.8
Lsat_1_v5_gn_2_97721 Lactuca sativa HOM05D002268 ORTHO05D006937 4.0e-197 691.8 482 70.1
SalBow5G0100 Salvia bowleyana HOM05D002268 ORTHO05D006937 5.8e-196 688.0 520 68.5
Actinidia06337 Actinidia chinensis HOM05D002268 ORTHO05D006937 1.3e-195 686.8 453 75.3
A08p02940 Brassica napus HOM05D002268 ORTHO05D006937 2.2e-195 686.0 423 76.1
Migut.N02313 Erythranthe guttata HOM05D002268 ORTHO05D006937 4.9e-195 684.9 435 77.2
TPR.G35035 Trifolium pratense HOM05D002268 ORTHO05D006937 6.4e-195 684.5 479 70.6
ATR0605G089 Amborella trichopoda HOM05D002268 ORTHO05D006937 1.9e-194 682.9 443 73.1
BraA08t32327Z Brassica rapa HOM05D002268 ORTHO05D006937 1.9e-194 682.9 476 70.8
Manes.06G165000 Manihot esculenta HOM05D002268 ORTHO05D006937 1.6e-193 679.9 475 72.6
BcaC01g01260 Brassica carinata HOM05D002268 ORTHO05D006937 3.5e-193 678.7 416 76.7
C03p89920 Brassica napus HOM05D002268 ORTHO05D006937 1.0e-192 677.2 422 75.4
BolC3t21311H Brassica oleracea HOM05D002268 ORTHO05D006937 1.0e-192 677.2 422 75.4
AUR62000114 Chenopodium quinoa HOM05D002268 ORTHO05D006937 8.7e-192 674.1 447 74.3
HPP92_009580 Vanilla planifolia HOM05D002268 ORTHO05D006937 8.7e-192 674.1 449 72.2
Sabra16G0158600 Salix brachista HOM05D002268 ORTHO05D006937 3.3e-191 672.2 493 68.4
MBI04_g17077_MAGBIO Magnolia biondii HOM05D002268 ORTHO05D006937 1.3e-190 670.2 489 67.3
CSS0013347 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 3.4e-188 662.1 370 84.3
A05p19700 Brassica napus HOM05D002268 ORTHO05D006937 2.7e-185 652.5 387 79.1
Os03g0174600 Oryza sativa ssp. japonica HOM05D002268 ORTHO05D006937 6.7e-184 647.9 462 69.0
Zm00001eb005670 Zea mays HOM05D002268 ORTHO05D006937 2.4e-181 639.4 411 71.8
SGA_v2.0_scaffold42G16104 Striga asiatica HOM05D002268 ORTHO05D006937 2.2e-174 616.3 482 65.4
CDE04G2511 Ceratophyllum demersum HOM05D002268 ORTHO05D006937 1.0e-171 607.4 491 62.7
BcaC05g27353 Brassica carinata HOM05D002268 ORTHO05D006937 1.1e-170 604.0 362 77.3
Hund22033 Selenicereus undatus HOM05D002268 ORTHO05D006937 2.3e-168 596.3 622 54.3
BolC5t32017H Brassica oleracea HOM05D002268 ORTHO05D006937 2.6e-164 582.8 442 65.4
Thecc.09G232700 Theobroma cacao HOM05D002268 ORTHO05D006937 4.5e-164 582.0 362 77.1
CSS0030827 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 2.3e-160 569.7 442 66.3
Lsat_1_v5_gn_2_132680 Lactuca sativa HOM05D002268 ORTHO05D006937 2.8e-158 562.8 400 68.5
C05p32860 Brassica napus HOM05D002268 ORTHO05D006937 3.6e-153 545.8 421 64.4
Ciclev10006706m.g Citrus clementina HOM05D002268 ORTHO05D006937 1.2e-143 514.2 554 54.2
Pp3c15_1840 Physcomitrium patens HOM05D002268 ORTHO05D006937 4.4e-143 512.3 460 56.7
SEGI_13867 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 2.4e-141 506.5 357 68.1
Dinv22182 Davidia involucrata HOM05D002268 ORTHO05D006937 1.6e-140 503.8 262 90.5
Hma1.2p1_0861F.1_g229710 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 2.9e-139 499.6 272 86.8
SMO331G0070 Selaginella moellendorffii HOM05D002268 ORTHO05D006937 8.9e-136 488.0 379 61.7
AagrBONN_evm.TU.Sc2ySwM_340.361 Anthoceros agrestis HOM05D002268 ORTHO05D006937 4.4e-135 485.7 491 51.7
Mapoly0129s0019 Marchantia polymorpha HOM05D002268 ORTHO05D006937 1.7e-134 483.8 447 55.3
TAR369G0718 Trochodendron aralioides HOM05D002268 ORTHO05D006937 3.8e-131 472.6 318 74.2
FAN08G3580 Fragaria x ananassa HOM05D002268 ORTHO05D006937 1.8e-128 463.8 340 69.1
Glyma.12G057700 Glycine max HOM05D002268 ORTHO05D006937 1.3e-126 457.6 256 83.2
FAN04G1610 Fragaria x ananassa HOM05D002268 ORTHO05D006937 6.6e-123 445.3 343 65.9
Peaxi162Scf00004g00224 Petunia axillaris HOM05D002268 ORTHO05D006937 3.4e-119 433.0 251 82.1
PRCOL_00001138 Prasinoderma coloniale HOM05D002268 ORTHO05D006937 7.3e-114 415.2 382 55.0
MCO02G416 Micromonas commoda HOM05D002268 ORTHO05D006937 4.4e-111 406.0 435 50.1
AagrBONN_evm.TU.Sc2ySwM_368.606 Anthoceros agrestis HOM05D002268 ORTHO05D006937 6.8e-104 382.1 384 51.3
Actinidia26439 Actinidia chinensis HOM05D002268 ORTHO05D006937 7.6e-103 378.6 236 78.4
Cre14.g628000 Chlamydomonas reinhardtii HOM05D002268 ORTHO05D006937 6.2e-97 359.0 530 40.0
Gohir.A05G069100 Gossypium hirsutum HOM05D002268 ORTHO05D006937 1.1e-90 338.2 278 63.7
CBR_g40742 Chara braunii HOM05D002268 ORTHO05D006937 3.6e-89 333.2 427 45.2
unitig_21.g20902 Utricularia gibba HOM05D002268 ORTHO05D007950 6.2e-73 279.3 206 67.5
unitig_21.g20901 Utricularia gibba HOM05D002268 ORTHO05D006937 3.4e-71 273.5 196 69.4
BcaB04g17220 Brassica carinata HOM05D002268 ORTHO05D006937 5.5e-69 266.2 175 72.0
Hma1.2p1_0861F.1_g229720 Hydrangea macrophylla HOM05D002268 ORTHO05D006937 1.5e-58 231.5 140 79.3
MSTRG.17590 Avicennia marina HOM05D002268 ORTHO05D006937 1.9e-53 214.5 223 56.5
BcaC01g01262 Brassica carinata HOM05D002268 ORTHO05D006937 7.2e-53 212.6 334 40.1
C03p89950 Brassica napus HOM05D002268 ORTHO05D001336 6.1e-52 209.5 229 50.7
AagrBONN_evm.TU.Sc2ySwM_117.3752 Anthoceros agrestis HOM05D002268 ORTHO05D021278 4.4e-50 203.4 300 37.3
CBR_g19922 Chara braunii HOM05D002268 ORTHO05D021278 4.4e-50 203.4 343 36.4
BolC3t21314H Brassica oleracea HOM05D002268 ORTHO05D006937 7.0e-48 196.1 229 48.5
Pp3c4_6690 Physcomitrium patens HOM05D002268 ORTHO05D021278 7.0e-48 196.1 400 31.0
CSS0037797 Camellia sinensis var. sinensis HOM05D002268 ORTHO05D006937 2.9e-46 190.7 115 76.5
Mapoly0010s0199 Marchantia polymorpha HOM05D002268 ORTHO05D021278 2.6e-42 177.6 329 35.3
SEGI_07269 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 3.3e-42 177.2 115 72.2
PRCOL_00001597 Prasinoderma coloniale HOM05D002268 ORTHO05D021278 4.8e-41 173.3 400 31.2
MCO12G105 Micromonas commoda HOM05D002268 ORTHO05D021278 1.1e-40 172.2 349 34.1
BraA05t20874Z Brassica rapa HOM05D002268 ORTHO05D006937 2.7e-36 157.5 85 84.7
Lsat_1_v5_gn_1_117501 Lactuca sativa HOM05D002268 ORTHO05D006937 1.8e-32 144.8 74 82.4
C03p89940 Brassica napus HOM05D002268 ORTHO05D040778 4.7e-28 130.2 117 59.8
MELO3C029180.2 Cucumis melo HOM05D002268 ORTHO05D168145 2.0e-26 124.8 253 37.2
BolC3t21313H Brassica oleracea HOM05D002268 ORTHO05D040778 7.5e-26 122.9 113 59.3
Nn3g21873 Nelumbo nucifera HOM05D002268 ORTHO05D006937 1.1e-24 119.0 92 66.3
SEGI_39418 Sequoiadendron giganteum HOM05D002268 ORTHO05D006937 4.2e-21 107.1 114 49.1
A08p02920 Brassica napus HOM05D002268 ORTHO05D099342 2.6e-18 97.8 99 53.5
Duzib150G1137 Durio zibethinus HOM05D002268 ORTHO05D006937 1.7e-14 85.1 84 61.9
MELO3C032733.2 Cucumis melo HOM05D002268 ORTHO05D170637 2.9e-14 84.3 218 31.7
MELO3C035704.2 Cucumis melo HOM05D002268 ORTHO05D166817 1.8e-11 75.1 146 33.6
Actinidia23968 Actinidia chinensis HOM05D002268 ORTHO05D006937 7.0e-08 63.2 38 81.6
QL06p040831 Quercus lobata HOM05D002268 ORTHO05D006937 7.0e-08 63.2 31 83.9
C02p10780 Brassica napus HOM05D002268 ORTHO05D042165 3.5e-07 60.8 158 30.4
BolC2t12207H Brassica oleracea HOM05D002268 ORTHO05D042165 6.0e-07 60.1 170 29.4
C01p11650 Brassica napus HOM05D026831 ORTHO05D011195 3.9e-06 57.4 141 29.1


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