Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017770 Sechium edule HOM05D004138 ORTHO05D004898 8.5e-154 547.0 277 100.0
CsaV3_7G022530 Cucumis sativus L. HOM05D004138 ORTHO05D004898 4.7e-120 434.9 279 81.4
MELO3C012647.2 Cucumis melo HOM05D004138 ORTHO05D004898 1.9e-113 412.9 290 75.9
Sed0010859 Sechium edule HOM05D004138 ORTHO05D004898 1.1e-111 407.1 267 81.3
CANSAT78G2043 Cannabis sativa HOM05D004138 ORTHO05D004898 1.5e-105 386.7 285 75.1
CARHR098330 Cardamine hirsuta HOM05D004138 ORTHO05D004898 4.3e-105 385.2 277 71.8
Phvul.007G057200 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 4.3e-105 385.2 282 73.8
AL7G40920 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 2.1e-104 382.9 264 74.6
Eucgr.H03482 Eucalyptus grandis HOM05D004138 ORTHO05D004898 6.2e-104 381.3 281 71.2
VMungo0720G0383 Vigna mungo HOM05D004138 ORTHO05D004898 1.4e-103 380.2 279 73.1
Carub.0003s2260 Capsella rubella HOM05D004138 ORTHO05D004898 1.8e-103 379.8 281 72.6
Atru.ctg752_3.80 Acer truncatum HOM05D004138 ORTHO05D004898 2.3e-103 379.4 275 73.5
Thhalv10021310m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 3.1e-103 379.0 280 70.4
AT3G22425 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 4.0e-103 378.6 284 71.8
BcaB04g20518 Brassica carinata HOM05D004138 ORTHO05D004898 4.0e-103 378.6 283 71.7
Sp3g20190 Schrenkiella parvula HOM05D004138 ORTHO05D004898 4.0e-103 378.6 277 71.1
arahy.Tifrunner.gnm1.ann1.WZ653D Arachis hypogaea HOM05D004138 ORTHO05D004898 8.9e-103 377.5 279 72.0
Carub.0007s2719 Capsella rubella HOM05D004138 ORTHO05D004898 8.9e-103 377.5 282 72.7
CSS0016260 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 1.5e-102 376.7 292 70.9
Nn4g26636 Nelumbo nucifera HOM05D004138 ORTHO05D004898 5.8e-102 374.8 268 73.1
BcaB06g26344 Brassica carinata HOM05D004138 ORTHO05D004898 9.9e-102 374.0 261 74.3
TWI15G0835 Tripterygium wilfordii HOM05D004138 ORTHO05D004898 9.9e-102 374.0 280 72.5
Manes.03G178800 Manihot esculenta HOM05D004138 ORTHO05D004898 1.3e-101 373.6 289 72.0
CARHR221500 Cardamine hirsuta HOM05D004138 ORTHO05D004898 1.7e-101 373.2 261 74.7
VMungo0720G1944 Vigna mungo HOM05D004138 ORTHO05D004898 1.7e-101 373.2 279 71.7
MD13G1192800 Malus domestica HOM05D004138 ORTHO05D004898 2.2e-101 372.9 286 71.3
Potri.010G087600 Populus trichocarpa HOM05D004138 ORTHO05D004898 2.2e-101 372.9 216 86.6
Aa31LG8G8990 Aethionema arabicum HOM05D004138 ORTHO05D004898 2.9e-101 372.5 286 70.3
arahy.Tifrunner.gnm1.ann1.M0DXBI Arachis hypogaea HOM05D004138 ORTHO05D004898 4.9e-101 371.7 247 77.7
arahy.Tifrunner.gnm1.ann1.Y7X6HY Arachis hypogaea HOM05D004138 ORTHO05D004898 4.9e-101 371.7 279 71.0
BcaC09g49174 Brassica carinata HOM05D004138 ORTHO05D004898 1.1e-100 370.5 284 70.1
Hma1.2p1_1344F.1_g277140 Hydrangea macrophylla HOM05D004138 ORTHO05D004898 1.4e-100 370.2 283 70.7
THA.LOC104808545 Tarenaya hassleriana HOM05D004138 ORTHO05D004898 1.9e-100 369.8 270 73.7
Gorai.006G239100 Gossypium raimondii HOM05D004138 ORTHO05D004898 3.2e-100 369.0 281 70.5
Lalb_Chr10g0096121 Lupinus albus HOM05D004138 ORTHO05D004898 3.2e-100 369.0 198 90.9
Sp7g13050 Schrenkiella parvula HOM05D004138 ORTHO05D004898 3.2e-100 369.0 276 70.3
Dinv44535 Davidia involucrata HOM05D004138 ORTHO05D004898 4.1e-100 368.6 283 71.4
Gohir.D09G218200 Gossypium hirsutum HOM05D004138 ORTHO05D004898 4.1e-100 368.6 282 70.9
Lalb_Chr17g0338611 Lupinus albus HOM05D004138 ORTHO05D004898 4.1e-100 368.6 277 71.8
Phvul.007G275100 Phaseolus vulgaris HOM05D004138 ORTHO05D004898 4.1e-100 368.6 279 71.0
TPR.G34563 Trifolium pratense HOM05D004138 ORTHO05D004898 4.1e-100 368.6 215 87.0
CiPaw.02G097200 Carya illinoinensis HOM05D004138 ORTHO05D004898 5.4e-100 368.2 282 71.6
Duzib052G0532 Durio zibethinus HOM05D004138 ORTHO05D004898 5.4e-100 368.2 286 70.6
CSS0012312 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 7.1e-100 367.9 275 73.1
C05p40930 Brassica napus HOM05D004138 ORTHO05D004898 9.2e-100 367.5 276 69.9
Gohir.A09G215700 Gossypium hirsutum HOM05D004138 ORTHO05D004898 9.2e-100 367.5 281 70.1
Lj5g0002897 Lotus japonicus HOM05D004138 ORTHO05D004898 9.2e-100 367.5 214 85.5
CiPaw.01G165700 Carya illinoinensis HOM05D004138 ORTHO05D004898 1.2e-99 367.1 284 69.7
ClCG06G006210 Citrullus lanatus HOM05D004138 ORTHO05D004898 1.2e-99 367.1 268 75.0
PSO210G3182 Papaver somniferum HOM05D004138 ORTHO05D004898 1.2e-99 367.1 283 70.3
BcaC05g28070 Brassica carinata HOM05D004138 ORTHO05D004898 1.6e-99 366.7 263 72.6
Cfa015643 Carpinus fangiana HOM05D004138 ORTHO05D004898 1.6e-99 366.7 276 69.9
FvH4_4g15510 Fragaria vesca HOM05D004138 ORTHO05D004898 2.1e-99 366.3 278 70.5
PGR004G1517 Punica granatum HOM05D004138 ORTHO05D004898 3.5e-99 365.5 282 69.1
Ciclev10005599m.g Citrus clementina HOM05D004138 ORTHO05D004898 4.6e-99 365.2 284 70.1
PSO832G0920 Papaver somniferum HOM05D004138 ORTHO05D004898 4.6e-99 365.2 281 70.1
MD16G1193500 Malus domestica HOM05D004138 ORTHO05D004898 6.0e-99 364.8 286 69.2
QL06p002509 Quercus lobata HOM05D004138 ORTHO05D004898 6.0e-99 364.8 279 69.2
SalBow3G1121 Salvia bowleyana HOM05D004138 ORTHO05D004898 7.8e-99 364.4 217 83.4
Glyma.20G145900 Glycine max HOM05D004138 ORTHO05D004898 1.0e-98 364.0 214 84.6
BcaB02g07851 Brassica carinata HOM05D004138 ORTHO05D004898 1.3e-98 363.6 226 82.3
A01p32660 Brassica napus HOM05D004138 ORTHO05D004898 1.7e-98 363.2 267 71.5
Ca_26329_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 1.7e-98 363.2 215 84.7
RcHm_v2.0_Chr4g0416251 Rosa chinensis HOM05D004138 ORTHO05D004898 3.0e-98 362.5 278 70.1
DCAR_027216 Daucus carota HOM05D004138 ORTHO05D004898 3.9e-98 362.1 215 85.6
CAN.G490.3 Capsicum annuum HOM05D004138 ORTHO05D004898 8.6e-98 360.9 283 69.3
AT4G14910 Arabidopsis thaliana HOM05D004138 ORTHO05D004898 1.1e-97 360.5 259 72.6
Psat6g207600 Pisum sativum HOM05D004138 ORTHO05D004898 1.1e-97 360.5 224 80.4
Thhalv10025980m.g Eutrema salsugineum HOM05D004138 ORTHO05D004898 1.5e-97 360.1 234 78.2
TPR.G5464 Trifolium pratense HOM05D004138 ORTHO05D004898 1.5e-97 360.1 225 80.4
FAN07G1942 Fragaria x ananassa HOM05D004138 ORTHO05D004898 2.5e-97 359.4 270 71.1
Lj6A608T71 Lonicera japonica HOM05D004138 ORTHO05D004898 3.3e-97 359.0 217 82.0
Thecc.04G231800 Theobroma cacao HOM05D004138 ORTHO05D004898 3.3e-97 359.0 278 69.4
BraA01t03394Z Brassica rapa HOM05D004138 ORTHO05D004898 4.3e-97 358.6 269 71.4
Ca_10902_v3 Cicer arietinum L. HOM05D004138 ORTHO05D004898 4.3e-97 358.6 224 81.2
Medtr1g103820 Medicago truncatula HOM05D004138 ORTHO05D004898 4.3e-97 358.6 224 79.5
TAR636G0642 Trochodendron aralioides HOM05D004138 ORTHO05D004898 5.6e-97 358.2 219 82.6
FAN17G0737 Fragaria x ananassa HOM05D004138 ORTHO05D004898 7.3e-97 357.8 270 70.7
BolC1t04138H Brassica oleracea HOM05D004138 ORTHO05D004898 1.6e-96 356.7 274 69.7
DCAR_002386 Daucus carota HOM05D004138 ORTHO05D004898 1.6e-96 356.7 207 86.0
FAN12G1931 Fragaria x ananassa HOM05D004138 ORTHO05D004898 1.6e-96 356.7 268 70.9
Lj3A735T49 Lonicera japonica HOM05D004138 ORTHO05D004898 1.6e-96 356.7 282 69.1
A05p26300 Brassica napus HOM05D004138 ORTHO05D004898 2.1e-96 356.3 224 79.5
Oeu050278.3 Olea europaea HOM05D004138 ORTHO05D004898 6.2e-96 354.8 215 82.8
MSTRG.21855 Avicennia marina HOM05D004138 ORTHO05D004898 8.1e-96 354.4 215 81.9
Solyc09g076020.3 Solanum lycopersicum HOM05D004138 ORTHO05D004898 8.1e-96 354.4 285 67.0
BolC5t32835H Brassica oleracea HOM05D004138 ORTHO05D004898 1.4e-95 353.6 266 69.5
Migut.N00183 Erythranthe guttata HOM05D004138 ORTHO05D004898 1.4e-95 353.6 217 80.6
FAN22G1640 Fragaria x ananassa HOM05D004138 ORTHO05D004898 1.4e-95 353.6 268 70.5
Sopen09g030850 Solanum pennellii HOM05D004138 ORTHO05D004898 1.4e-95 353.6 213 82.2
GSVIVG01017973001 Vitis vinifera HOM05D004138 ORTHO05D004898 2.4e-95 352.8 224 78.1
C01p41840 Brassica napus HOM05D004138 ORTHO05D004898 4.0e-95 352.1 273 70.0
CDE07G0326 Ceratophyllum demersum HOM05D004138 ORTHO05D004898 5.2e-95 351.7 217 81.1
Haze_00903 Corylus avellana HOM05D004138 ORTHO05D004898 6.8e-95 351.3 285 67.4
PGSC0003DMG400030085 Solanum tuberosum HOM05D004138 ORTHO05D004898 6.8e-95 351.3 213 81.7
Sc10g0004960 Simmondsia chinensis HOM05D004138 ORTHO05D004898 1.2e-94 350.5 275 70.2
Cc03_g03750 Coffea canephora HOM05D004138 ORTHO05D004898 1.5e-94 350.1 223 78.5
Nitab4.5_0001560g0020 Nicotiana tabacum HOM05D004138 ORTHO05D004898 2.6e-94 349.4 203 85.7
Aqoxy2G03389 Aquilegia oxysepala HOM05D004138 ORTHO05D004898 4.4e-94 348.6 286 67.8
TAR365G0475 Trochodendron aralioides HOM05D004138 ORTHO05D004898 5.8e-94 348.2 270 71.5
Rhsim02G0024100 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.7e-93 346.7 190 88.9
EL10Ac1g01312 Beta vulgaris HOM05D004138 ORTHO05D004898 2.2e-93 346.3 212 82.5
ECA238G3454 Erigeron canadensis HOM05D004138 ORTHO05D004898 2.2e-93 346.3 198 84.3
AUR62033623 Chenopodium quinoa HOM05D004138 ORTHO05D004898 8.4e-93 344.4 213 80.8
Lsat_1_v5_gn_2_31480 Lactuca sativa HOM05D004138 ORTHO05D004898 8.4e-93 344.4 250 72.0
Haze_03894 Corylus avellana HOM05D004138 ORTHO05D004898 1.4e-92 343.6 281 67.3
HanXRQChr14g0432251 Helianthus annuus HOM05D004138 ORTHO05D004898 2.4e-92 342.8 198 83.8
ATR0697G231 Amborella trichopoda HOM05D004138 ORTHO05D004898 4.2e-92 342.0 225 76.4
AUR62034751 Chenopodium quinoa HOM05D004138 ORTHO05D004898 5.4e-92 341.7 209 81.3
HanXRQChr09g0265721 Helianthus annuus HOM05D004138 ORTHO05D004898 7.1e-92 341.3 218 77.1
Mapoly0095s0045 Marchantia polymorpha HOM05D004138 ORTHO05D004898 1.2e-91 340.5 239 71.5
Pp3c13_21930 Physcomitrium patens HOM05D004138 ORTHO05D004898 5.1e-90 335.1 198 82.8
Os04g0617800 Oryza sativa ssp. japonica HOM05D004138 ORTHO05D004898 5.6e-89 331.6 219 77.2
Rhsim02G0024500 Rhododendron simsii HOM05D004138 ORTHO05D004898 6.9e-87 324.7 325 58.5
Actinidia36959 Actinidia chinensis HOM05D004138 ORTHO05D004898 5.8e-86 321.6 285 65.3
Zm00001eb070570 Zea mays HOM05D004138 ORTHO05D004898 5.8e-86 321.6 228 72.4
Cpa.g.sc58.111 Carica papaya HOM05D004138 ORTHO05D004898 2.2e-85 319.7 271 65.3
CBR_g48324 Chara braunii HOM05D004138 ORTHO05D004898 1.1e-84 317.4 197 78.7
Hund12131 Selenicereus undatus HOM05D004138 ORTHO05D004898 2.3e-82 309.7 219 74.4
Prupe.1G013300 Prunus persica HOM05D004138 ORTHO05D004898 3.0e-82 309.3 291 63.2
Potri.008G152701 Populus trichocarpa HOM05D004138 ORTHO05D004898 3.9e-82 308.9 193 80.8
Nitab4.5_0000043g0130 Nicotiana tabacum HOM05D004138 ORTHO05D004898 1.5e-81 307.0 206 76.2
Psat6g050360 Pisum sativum HOM05D004138 ORTHO05D004898 2.5e-81 306.2 166 89.2
Rhsim02G0024700 Rhododendron simsii HOM05D004138 ORTHO05D004898 3.1e-79 299.3 321 56.7
COL.COLO4_04735 Corchorus olitorius HOM05D004138 ORTHO05D004898 1.7e-77 293.5 166 86.1
SMO367G0933 Selaginella moellendorffii HOM05D004138 ORTHO05D004898 2.2e-77 293.1 196 73.0
Rhsim02G0025100 Rhododendron simsii HOM05D004138 ORTHO05D004898 4.6e-75 285.4 243 64.6
Cre02.g103850 Chlamydomonas reinhardtii HOM05D004138 ORTHO05D004898 6.0e-75 285.0 196 70.4
SGA_v2.0_scaffold20G09126 Striga asiatica HOM05D004138 ORTHO05D004898 1.5e-73 280.4 168 82.1
Oeu031232.1 Olea europaea HOM05D004138 ORTHO05D004898 5.6e-73 278.5 155 86.5
Rhsim02G0025200 Rhododendron simsii HOM05D004138 ORTHO05D004898 1.4e-71 273.9 292 56.8
SGA_v2.0_scaffold10G05080 Striga asiatica HOM05D004138 ORTHO05D004898 3.1e-71 272.7 216 67.1
Peaxi162Scf00092g01021 Petunia axillaris HOM05D004138 ORTHO05D004898 2.0e-70 270.0 192 74.0
Rhsim02G0024200 Rhododendron simsii HOM05D004138 ORTHO05D004898 7.6e-70 268.1 151 86.8
Dinv13992 Davidia involucrata HOM05D004138 ORTHO05D004898 1.7e-69 266.9 227 65.2
unitig_0.g724 Utricularia gibba HOM05D004952 ORTHO05D006131 1.7e-69 266.9 168 75.6
SEGI_10012 Sequoiadendron giganteum HOM05D004138 ORTHO05D004898 2.2e-69 266.5 148 85.1
Rhsim02G0024800 Rhododendron simsii HOM05D004138 ORTHO05D004898 3.2e-68 262.7 284 56.3
HPP92_026352 Vanilla planifolia HOM05D004138 ORTHO05D004898 1.6e-67 260.4 198 68.2
AL7G43460 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 2.3e-66 256.5 159 81.8
Sabra10G0055200 Salix brachista HOM05D004138 ORTHO05D004898 1.5e-65 253.8 230 63.5
MBI06_g37250_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 6.3e-64 248.4 210 65.7
MBI06_g26001_MAGBIO Magnolia biondii HOM05D004138 ORTHO05D004898 3.1e-63 246.1 198 67.7
AL7G43530 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 1.2e-62 244.2 149 82.6
CDE10G0981 Ceratophyllum demersum HOM05D000366 ORTHO05D000437 7.2e-60 235.0 230 57.8
Lj2g0010828 Lotus japonicus HOM05D004138 ORTHO05D004898 9.7e-57 224.6 167 71.3
AagrBONN_evm.TU.Sc2ySwM_228.3076 Anthoceros agrestis HOM05D004138 ORTHO05D004898 4.8e-56 222.2 132 78.0
Haze_27397 Corylus avellana HOM05D004138 ORTHO05D004898 3.1e-55 219.5 208 49.0
Ah.04g154580 Amaranthus hybridus HOM05D004138 ORTHO05D004898 3.2e-52 209.5 179 65.9
arahy.Tifrunner.gnm1.ann1.PP7NHW Arachis hypogaea HOM05D004138 ORTHO05D004898 2.1e-51 206.8 187 62.0
ATR0661G018 Amborella trichopoda HOM05D004138 ORTHO05D004898 1.7e-45 187.2 133 72.9
Sabra08G0116300 Salix brachista HOM05D004138 ORTHO05D004898 2.2e-45 186.8 334 41.0
SHI00436 Sapria himalayana HOM05D004138 ORTHO05D004898 5.9e-38 162.2 145 58.6
PRCOL_00007017 Prasinoderma coloniale HOM05D004138 ORTHO05D004898 2.5e-36 156.8 188 43.1
MCO15G615 Micromonas commoda HOM05D004138 ORTHO05D004898 3.6e-35 152.9 227 38.3
Cfa024592 Carpinus fangiana HOM05D004138 ORTHO05D004898 7.5e-33 145.2 223 39.0
Actinidia40147 Actinidia chinensis HOM05D004138 ORTHO05D004898 1.6e-30 137.5 102 71.6
arahy.Tifrunner.gnm1.ann1.UX9Z2U Arachis hypogaea HOM05D004138 ORTHO05D004898 7.7e-22 108.6 62 83.9
arahy.Tifrunner.gnm1.ann1.J4BC6Z Arachis hypogaea HOM05D004138 ORTHO05D004898 3.8e-21 106.3 62 82.3
Psat4g223320 Pisum sativum HOM05D004138 ORTHO05D004898 1.6e-19 100.9 139 51.8
Medtr8g045710 Medicago truncatula HOM05D004138 ORTHO05D004898 2.6e-17 93.6 59 79.7
Rhsim02G0025000 Rhododendron simsii HOM05D004138 ORTHO05D004898 5.6e-12 75.9 42 85.7
CARHR221520 Cardamine hirsuta HOM05D004138 ORTHO05D004898 2.1e-11 73.9 57 64.9
Actinidia40148 Actinidia chinensis HOM05D004138 ORTHO05D004898 6.1e-11 72.4 68 58.8
AL5G12050 Arabidopsis lyrata HOM05D004138 ORTHO05D004898 6.8e-10 68.9 36 86.1
Rhsim04G0123400 Rhododendron simsii HOM05D007559 ORTHO05D009642 8.9e-10 68.6 40 82.5
CSS0002625 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 1.5e-09 67.8 36 83.3
Medtr1g071390 Medicago truncatula HOM05D004138 ORTHO05D004898 1.5e-09 67.8 118 37.3
arahy.Tifrunner.gnm1.ann1.RWV13Y Arachis hypogaea HOM05D000351 ORTHO05D018478 1.4e-07 61.2 32 90.6
CSS0029286 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 1.2e-06 58.2 42 64.3
Rhsim08G0128300 Rhododendron simsii HOM05D004138 ORTHO05D339665 4.6e-06 56.2 31 83.9
CSS0040239 Camellia sinensis var. sinensis HOM05D004138 ORTHO05D004898 5.9e-06 55.8 34 73.5


User provided reference genes

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