Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0017171 Sechium edule HOM05D003836 ORTHO05D004556 0.0e+00 1234.6 640 100.0
ClCG11G007570 Citrullus lanatus HOM05D003836 ORTHO05D004556 4.3e-302 1040.8 641 84.6
CsaV3_7G022080 Cucumis sativus L. HOM05D003836 ORTHO05D004556 5.9e-299 1030.4 641 83.5
MELO3C013236.2 Cucumis melo HOM05D003836 ORTHO05D004556 4.1e-276 954.5 621 81.6
CiPaw.05G187900 Carya illinoinensis HOM05D003836 ORTHO05D004556 1.3e-221 773.5 649 63.8
Cfa015051 Carpinus fangiana HOM05D003836 ORTHO05D004556 5.3e-215 751.5 651 63.9
TAR374G0617 Trochodendron aralioides HOM05D003836 ORTHO05D004556 1.7e-213 746.5 641 61.8
GSVIVG01011621001 Vitis vinifera HOM05D003836 ORTHO05D004556 2.8e-208 729.2 650 62.9
TAR622G1236 Trochodendron aralioides HOM05D003836 ORTHO05D004556 4.0e-207 725.3 645 60.6
Nn4g24475 Nelumbo nucifera HOM05D003836 ORTHO05D004556 6.4e-205 718.0 649 60.9
FvH4_4g33240 Fragaria vesca HOM05D003836 ORTHO05D004556 8.1e-200 701.0 652 61.2
Manes.15G136900 Manihot esculenta HOM05D003836 ORTHO05D004556 1.8e-199 699.9 652 60.9
Nn3g18432 Nelumbo nucifera HOM05D003836 ORTHO05D004556 2.4e-199 699.5 647 60.0
CANSAT78G2203 Cannabis sativa HOM05D003836 ORTHO05D004556 3.1e-199 699.1 663 60.2
Ciclev10014689m.g Citrus clementina HOM05D003836 ORTHO05D004556 2.6e-198 696.0 645 61.1
Haze_10840 Corylus avellana HOM05D003836 ORTHO05D004556 3.4e-198 695.7 652 59.5
Glyma.04G189300 Glycine max HOM05D003836 ORTHO05D004556 5.8e-198 694.9 519 70.3
Manes.17G086000 Manihot esculenta HOM05D003836 ORTHO05D004556 7.6e-198 694.5 656 61.1
TWI74G0623 Tripterygium wilfordii HOM05D003836 ORTHO05D004556 6.5e-197 691.4 651 60.8
Gorai.013G030000 Gossypium raimondii HOM05D003836 ORTHO05D004556 1.9e-196 689.9 649 60.4
Glyma.06G176300 Glycine max HOM05D003836 ORTHO05D004556 2.7e-195 686.0 519 69.4
Lj1g0024673 Lotus japonicus HOM05D003836 ORTHO05D004556 1.0e-194 684.1 488 72.5
FAN17G2261 Fragaria x ananassa HOM05D003836 ORTHO05D004556 1.8e-194 683.3 653 60.2
Phvul.009G172600 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 1.8e-194 683.3 482 72.4
FAN22G0514 Fragaria x ananassa HOM05D003836 ORTHO05D004556 2.3e-194 682.9 656 59.3
MD16G1015700 Malus domestica HOM05D003836 ORTHO05D004556 2.3e-194 682.9 653 60.0
Ca_16122_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 6.7e-194 681.4 671 58.4
Gohir.A13G027900 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.3e-192 677.2 573 64.6
FAN12G1258 Fragaria x ananassa HOM05D003836 ORTHO05D004556 3.7e-192 675.6 653 59.6
Prupe.1G335900 Prunus persica HOM05D003836 ORTHO05D004556 1.1e-191 674.1 650 60.3
Atru.chr7.2694 Acer truncatum HOM05D003836 ORTHO05D004556 1.2e-190 670.6 638 59.4
TPR.G35600 Trifolium pratense HOM05D003836 ORTHO05D004556 2.0e-190 669.8 676 57.8
RcHm_v2.0_Chr4g0442391 Rosa chinensis HOM05D003836 ORTHO05D004556 2.6e-190 669.5 653 59.3
Lalb_Chr11g0070001 Lupinus albus HOM05D003836 ORTHO05D004556 1.0e-189 667.5 667 57.6
Medtr3g076570 Medicago truncatula HOM05D003836 ORTHO05D004556 1.7e-189 666.8 656 59.0
FAN07G2679 Fragaria x ananassa HOM05D003836 ORTHO05D004556 2.2e-189 666.4 656 58.4
VMungo1309G0617 Vigna mungo HOM05D003836 ORTHO05D004556 3.8e-189 665.6 538 66.7
Aqoxy6G01037 Aquilegia oxysepala HOM05D003836 ORTHO05D004556 5.0e-189 665.2 535 65.8
Gorai.008G170400 Gossypium raimondii HOM05D003836 ORTHO05D004556 1.4e-188 663.7 486 71.2
QL03p038287 Quercus lobata HOM05D003836 ORTHO05D004556 2.5e-188 662.9 721 54.9
PSO063G7099 Papaver somniferum HOM05D003836 ORTHO05D004556 6.7e-186 654.8 649 57.8
Gohir.D13G026700 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.1e-185 654.1 574 63.2
PSO782G5172 Papaver somniferum HOM05D003836 ORTHO05D004556 9.7e-185 651.0 648 58.0
Eucgr.G02079 Eucalyptus grandis HOM05D003836 ORTHO05D004556 1.1e-183 647.5 652 57.2
Dinv32673 Davidia involucrata HOM05D003836 ORTHO05D004556 6.9e-183 644.8 651 57.9
PGR142G3191 Punica granatum HOM05D003836 ORTHO05D004556 2.6e-182 642.9 660 58.0
Migut.E00502 Erythranthe guttata HOM05D003836 ORTHO05D004556 5.9e-182 641.7 533 63.0
Potri.010G103400 Populus trichocarpa HOM05D003836 ORTHO05D004556 5.0e-181 638.6 481 69.9
arahy.Tifrunner.gnm1.ann1.THT645 Arachis hypogaea HOM05D003836 ORTHO05D004556 8.5e-181 637.9 542 64.6
arahy.Tifrunner.gnm1.ann1.FHB42U Arachis hypogaea HOM05D003836 ORTHO05D004556 1.8e-178 630.2 683 56.1
Atru.chr11.806 Acer truncatum HOM05D003836 ORTHO05D004556 3.9e-178 629.0 396 80.3
Thecc.02G307000 Theobroma cacao HOM05D003836 ORTHO05D004556 3.9e-178 629.0 652 57.7
Dinv02294 Davidia involucrata HOM05D003836 ORTHO05D004556 4.3e-177 625.5 433 74.8
Hma1.2p1_2859F.1_g329510 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 4.3e-177 625.5 401 77.6
arahy.Tifrunner.gnm1.ann1.HCE13Z Arachis hypogaea HOM05D003836 ORTHO05D004556 5.3e-175 618.6 538 64.1
AT1G67960 Arabidopsis thaliana HOM05D003836 ORTHO05D004556 2.6e-174 616.3 662 55.3
Duzib251G0897 Durio zibethinus HOM05D003836 ORTHO05D004556 1.3e-173 614.0 650 57.2
Psat5g116920 Pisum sativum HOM05D003836 ORTHO05D004556 1.3e-173 614.0 627 59.0
AL2G26960 Arabidopsis lyrata HOM05D003836 ORTHO05D004556 1.7e-173 613.6 662 56.0
CARHR060610 Cardamine hirsuta HOM05D003836 ORTHO05D004556 1.9e-172 610.1 500 65.6
Sp5g22940 Schrenkiella parvula HOM05D003836 ORTHO05D004556 7.2e-172 608.2 666 55.4
Carub.0002s1445 Capsella rubella HOM05D003836 ORTHO05D004556 8.8e-170 601.3 512 62.7
Duzib268G0198 Durio zibethinus HOM05D003836 ORTHO05D004556 2.6e-169 599.7 653 55.3
Glyma.07G191900 Glycine max HOM05D003836 ORTHO05D004556 3.3e-169 599.4 515 62.7
ECA246G1487 Erigeron canadensis HOM05D003836 ORTHO05D004556 9.1e-167 591.3 526 60.5
Sabra10G0076000 Salix brachista HOM05D003836 ORTHO05D004556 3.5e-166 589.3 494 64.8
Gohir.A12G154400 Gossypium hirsutum HOM05D003836 ORTHO05D004556 3.8e-165 585.9 585 58.8
Cc11_g06410 Coffea canephora HOM05D003836 ORTHO05D004556 6.5e-165 585.1 670 51.9
A07p34480 Brassica napus HOM05D003836 ORTHO05D004556 1.1e-164 584.3 637 54.5
COL.COLO4_27608 Corchorus olitorius HOM05D003836 ORTHO05D004556 1.1e-164 584.3 586 60.2
ATR0021G013 Amborella trichopoda HOM05D003836 ORTHO05D004556 5.5e-164 582.0 644 51.4
Lsat_1_v5_gn_3_104360 Lactuca sativa HOM05D003836 ORTHO05D004556 5.5e-164 582.0 660 52.3
Gohir.D12G157600 Gossypium hirsutum HOM05D003836 ORTHO05D004556 9.4e-164 581.3 422 72.7
Thhalv10018303m.g Eutrema salsugineum HOM05D003836 ORTHO05D004556 2.7e-163 579.7 650 54.5
Aa31sc536G20 Aethionema arabicum HOM05D003836 ORTHO05D004556 2.2e-160 570.1 694 50.6
Cpa.g.sc2.157 Carica papaya HOM05D003836 ORTHO05D004556 2.2e-160 570.1 602 56.3
Zm00001eb216180 Zea mays HOM05D003836 ORTHO05D004556 1.2e-158 564.3 653 50.7
DCAR_023556 Daucus carota HOM05D003836 ORTHO05D004556 5.9e-158 562.0 667 49.9
Glyma.13G184600 Glycine max HOM05D003836 ORTHO05D004556 2.1e-155 553.5 490 61.0
Ah.02g131240 Amaranthus hybridus HOM05D003836 ORTHO05D004556 2.7e-155 553.1 419 68.3
EL10Ac8g19453 Beta vulgaris HOM05D003836 ORTHO05D004556 2.3e-154 550.1 695 49.1
BcaB03g15387 Brassica carinata HOM05D003836 ORTHO05D004556 3.7e-152 542.7 659 51.1
TPR.G32436 Trifolium pratense HOM05D003836 ORTHO05D004556 8.3e-152 541.6 420 66.0
SalBow2G2298 Salvia bowleyana HOM05D003836 ORTHO05D004556 4.1e-151 539.3 586 52.9
SGA_v2.0_scaffold23G10153 Striga asiatica HOM05D003836 ORTHO05D004556 4.1e-143 512.7 528 57.0
Psat7g111040 Pisum sativum HOM05D003836 ORTHO05D004556 5.6e-140 502.3 364 70.1
VMungo0251G2034 Vigna mungo HOM05D003836 ORTHO05D004556 6.8e-138 495.4 463 59.6
arahy.Tifrunner.gnm1.ann1.36Q8NS Arachis hypogaea HOM05D003836 ORTHO05D004556 5.7e-137 492.3 653 49.3
BolC6t39223H Brassica oleracea HOM05D003836 ORTHO05D004556 2.2e-136 490.3 452 59.7
BcaC08g46221 Brassica carinata HOM05D003836 ORTHO05D004556 4.9e-136 489.2 499 55.5
unitig_8.g4015 Utricularia gibba HOM05D003836 ORTHO05D004556 1.4e-135 487.6 660 47.7
Os03g0715400 Oryza sativa ssp. japonica HOM05D003836 ORTHO05D004556 5.0e-133 479.2 397 64.5
Phvul.002G223900 Phaseolus vulgaris HOM05D003836 ORTHO05D004556 1.2e-131 474.6 487 55.0
arahy.Tifrunner.gnm1.ann1.6NWB5V Arachis hypogaea HOM05D003836 ORTHO05D004556 2.3e-130 470.3 488 55.1
Pp3c12_1050 Physcomitrium patens HOM05D003836 ORTHO05D004556 9.8e-129 464.9 425 57.2
Lj6A734G74 Lonicera japonica HOM05D003836 ORTHO05D004556 1.4e-127 461.1 641 44.3
Medtr4g090465 Medicago truncatula HOM05D003836 ORTHO05D004556 1.2e-126 458.0 406 61.6
Mapoly0019s0007 Marchantia polymorpha HOM05D003836 ORTHO05D004556 8.9e-122 441.8 497 48.9
Solyc06g051440.4 Solanum lycopersicum HOM05D003836 ORTHO05D004556 1.5e-121 441.0 290 75.9
SHI04351 Sapria himalayana HOM05D003836 ORTHO05D004556 3.9e-117 426.4 354 65.5
BcaB03g15147 Brassica carinata HOM05D003836 ORTHO05D004556 3.6e-115 419.9 613 45.7
Lalb_Chr23g0273371 Lupinus albus HOM05D003836 ORTHO05D004556 2.3e-114 417.2 495 53.3
C06p42030 Brassica napus HOM05D003836 ORTHO05D004556 1.9e-111 407.5 616 43.7
Nitab4.5_0001516g0010 Nicotiana tabacum HOM05D003836 ORTHO05D004556 4.4e-105 386.3 788 37.8
arahy.Tifrunner.gnm1.ann1.0AB4R7 Arachis hypogaea HOM05D003836 ORTHO05D004556 7.1e-103 379.0 488 49.4
Oeu036124.4 Olea europaea HOM05D003836 ORTHO05D004556 6.6e-101 372.5 310 66.5
AUR62033051 Chenopodium quinoa HOM05D003836 ORTHO05D004556 1.9e-95 354.4 445 50.8
MD13G1017500 Malus domestica HOM05D003836 ORTHO05D004556 1.0e-93 348.6 445 50.3
AagrBONN_evm.TU.Sc2ySwM_228.1822 Anthoceros agrestis HOM05D003836 ORTHO05D004556 2.4e-90 337.4 339 52.5
SMO358G0292 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 7.6e-89 332.4 413 45.8
Sopen06g017410 Solanum pennellii HOM05D003836 ORTHO05D004556 1.4e-82 311.6 434 46.5
Peaxi162Scf00825g00424 Petunia axillaris HOM05D003836 ORTHO05D004556 2.7e-78 297.4 318 53.5
Sc10g0004880 Simmondsia chinensis HOM05D003836 ORTHO05D004556 1.8e-77 294.7 197 74.1
MBI11_g36366_MAGBIO Magnolia biondii HOM05D003836 ORTHO05D004556 3.0e-77 293.9 288 54.5
HanXRQChr15g0473551 Helianthus annuus HOM05D003836 ORTHO05D004556 5.7e-76 289.7 336 51.2
Sc10g0004870 Simmondsia chinensis HOM05D003836 ORTHO05D004556 6.5e-72 276.2 245 60.4
Nitab4.5_0001227g0030 Nicotiana tabacum HOM05D003836 ORTHO05D004556 1.6e-67 261.5 528 36.7
Lalb_Chr23g0273381 Lupinus albus HOM05D003836 ORTHO05D004556 3.7e-67 260.4 171 73.1
CSS0006660 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 5.0e-64 250.0 166 72.9
BcaC08g46015 Brassica carinata HOM05D003836 ORTHO05D004556 3.2e-63 247.3 188 69.7
DCAR_030293 Daucus carota HOM05D003836 ORTHO05D004556 6.7e-61 239.6 372 41.4
AUR62042201 Chenopodium quinoa HOM05D003836 ORTHO05D004556 3.3e-60 237.3 254 53.1
Hma1.2p1_1450F.1_g284160 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 2.2e-59 234.6 354 43.5
HanXRQChr15g0473541 Helianthus annuus HOM05D003836 ORTHO05D004556 8.2e-59 232.6 166 67.5
Peaxi162Scf00825g00423 Petunia axillaris HOM05D003836 ORTHO05D004556 2.4e-58 231.1 164 68.3
C01p04020 Brassica napus HOM05D003836 ORTHO05D004556 8.8e-53 212.6 178 62.4
Hma1.2p1_0658F.1_g197210 Hydrangea macrophylla HOM05D003836 ORTHO05D004556 5.9e-49 199.9 320 45.6
Gorai.013G150200 Gossypium raimondii HOM05D003836 ORTHO05D004556 1.5e-47 195.3 145 68.3
MD13G1017700 Malus domestica HOM05D003836 ORTHO05D004556 2.1e-46 191.4 124 71.0
PRCOL_00001721 Prasinoderma coloniale HOM05D003836 ORTHO05D004556 1.8e-45 188.3 415 33.5
Nn8g39028 Nelumbo nucifera HOM05D003836 ORTHO05D004556 3.7e-43 180.6 140 69.3
MCO03G489 Micromonas commoda HOM05D003836 ORTHO05D004556 6.3e-43 179.9 384 32.3
arahy.Tifrunner.gnm1.ann1.I9RBIQ Arachis hypogaea HOM05D003836 ORTHO05D004556 7.0e-42 176.4 178 58.4
Ca_18504_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 1.0e-40 172.6 170 60.0
Nn6g35439 Nelumbo nucifera HOM05D003836 ORTHO05D004556 8.0e-38 162.9 144 64.6
Gohir.D13G133800 Gossypium hirsutum HOM05D003836 ORTHO05D004556 1.0e-37 162.5 145 59.3
Nn6g35150 Nelumbo nucifera HOM05D003836 ORTHO05D004556 4.0e-37 160.6 119 72.3
HPP92_020596 Vanilla planifolia HOM05D003836 ORTHO05D004556 1.0e-32 146.0 182 47.3
C06p38100 Brassica napus HOM05D003836 ORTHO05D004556 3.2e-31 141.0 239 38.9
BolC6t38907H Brassica oleracea HOM05D003836 ORTHO05D004556 3.2e-31 141.0 239 38.9
CAN.G2032.2 Capsicum annuum HOM05D003836 ORTHO05D004556 4.7e-30 137.1 139 54.0
arahy.Tifrunner.gnm1.ann1.MA62LX Arachis hypogaea HOM05D003836 ORTHO05D004556 4.4e-28 130.6 87 75.9
Cre02.g091000 Chlamydomonas reinhardtii HOM05D003836 ORTHO05D004556 2.8e-27 127.9 325 27.1
RcHm_v2.0_Chr2g0114371 Rosa chinensis HOM05D003836 ORTHO05D004556 3.3e-23 114.4 70 82.9
arahy.Tifrunner.gnm1.ann1.2AK3X2 Arachis hypogaea HOM05D003836 ORTHO05D004556 9.5e-23 112.8 92 64.1
arahy.Tifrunner.gnm1.ann1.62N7D7 Arachis hypogaea HOM05D003836 ORTHO05D004556 9.5e-23 112.8 92 64.1
arahy.Tifrunner.gnm1.ann1.6IM5NS Arachis hypogaea HOM05D003836 ORTHO05D004556 9.5e-23 112.8 92 64.1
arahy.Tifrunner.gnm1.ann1.QY8RSF Arachis hypogaea HOM05D003836 ORTHO05D004556 9.5e-23 112.8 92 64.1
Hund15725 Selenicereus undatus HOM05D003836 ORTHO05D004556 1.2e-22 112.5 126 51.6
Cfa025144 Carpinus fangiana HOM05D003836 ORTHO05D004556 1.6e-22 112.1 289 32.5
arahy.Tifrunner.gnm1.ann1.1LH17Q Arachis hypogaea HOM05D003836 ORTHO05D004556 1.4e-21 109.0 84 67.9
arahy.Tifrunner.gnm1.ann1.XXVP91 Arachis hypogaea HOM05D003836 ORTHO05D004556 3.0e-21 107.8 86 65.1
arahy.Tifrunner.gnm1.ann1.ANFG2H Arachis hypogaea HOM05D003836 ORTHO05D004556 4.4e-20 104.0 91 59.3
Oeu043972.2 Olea europaea HOM05D003836 ORTHO05D004556 5.7e-20 103.6 177 40.7
Cpa.g.sc2.159 Carica papaya HOM05D003836 ORTHO05D004556 7.0e-18 96.7 69 65.2
Gohir.D06G130832 Gossypium hirsutum HOM05D005098 ORTHO05D004556 9.2e-18 96.3 110 53.6
TPR.G24606 Trifolium pratense HOM05D003836 ORTHO05D004556 7.8e-17 93.2 69 60.9
CSS0003774 Camellia sinensis var. sinensis HOM05D003836 ORTHO05D004556 1.6e-14 85.5 231 31.6
Nn6g35438 Nelumbo nucifera HOM05D003836 ORTHO05D004556 3.1e-13 81.3 51 84.3
SEGI_35804 Sequoiadendron giganteum HOM05D003836 ORTHO05D004556 3.4e-12 77.8 176 34.1
SHI04354 Sapria himalayana HOM05D003836 ORTHO05D004556 5.8e-12 77.0 63 58.7
SMO278G0031 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 5.8e-12 77.0 147 38.1
arahy.Tifrunner.gnm1.ann1.X5KGN6 Arachis hypogaea HOM05D003836 ORTHO05D004556 7.5e-12 76.6 175 38.3
Gorai.010G152700 Gossypium raimondii HOM05D003836 ORTHO05D004556 7.5e-12 76.6 66 60.6
arahy.Tifrunner.gnm1.ann1.UYUS3H Arachis hypogaea HOM05D003836 ORTHO05D019773 4.9e-11 73.9 53 71.7
arahy.Tifrunner.gnm1.ann1.45U5GW Arachis hypogaea HOM05D003836 ORTHO05D011406 9.2e-10 69.7 52 67.3
Ca_18505_v3 Cicer arietinum L. HOM05D003836 ORTHO05D004556 1.2e-09 69.3 69 49.3
RcHm_v2.0_Chr4g0390701 Rosa chinensis HOM05D003836 ORTHO05D004556 1.1e-07 62.8 39 71.8
RcHm_v2.0_Chr6g0287871 Rosa chinensis HOM05D003836 ORTHO05D004556 1.1e-07 62.8 40 80.0
arahy.Tifrunner.gnm1.ann1.70DEUR Arachis hypogaea HOM05D000602 ORTHO05D004556 1.9e-07 62.0 39 71.8
Zm00001eb237940 Zea mays HOM05D003836 ORTHO05D004556 1.9e-07 62.0 45 55.6
Zm00001eb410650 Zea mays HOM05D003836 ORTHO05D004556 1.9e-07 62.0 45 55.6
arahy.Tifrunner.gnm1.ann1.JZ224H Arachis hypogaea HOM05D022818 ORTHO05D000304 5.6e-07 60.5 52 63.5
SMO200G0209 Selaginella moellendorffii HOM05D003836 ORTHO05D004556 5.6e-07 60.5 81 43.2
Zm00001eb175210 Zea mays HOM05D003836 ORTHO05D004556 5.6e-07 60.5 45 53.3


User provided reference genes

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