Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0016076 Sechium edule HOM05D006814 ORTHO05D008613 2.5e-130 468.8 231 100.0
MELO3C008839.2 Cucumis melo HOM05D006814 ORTHO05D008613 1.7e-115 419.5 221 92.3
CsaV3_4G012030 Cucumis sativus L. HOM05D006814 ORTHO05D008613 1.1e-114 416.8 221 91.4
ClCG04G005520 Citrullus lanatus HOM05D006814 ORTHO05D008613 2.7e-113 412.1 238 86.6
Thecc.03G307100 Theobroma cacao HOM05D006814 ORTHO05D008613 1.4e-109 399.8 221 84.2
CiPaw.11G097800 Carya illinoinensis HOM05D006814 ORTHO05D008613 1.8e-109 399.4 221 85.1
CiPaw.11G096600 Carya illinoinensis HOM05D006814 ORTHO05D008613 1.2e-108 396.7 221 84.2
Ciclev10032236m.g Citrus clementina HOM05D006814 ORTHO05D008613 1.5e-108 396.4 221 83.3
Rhsim11G0018900 Rhododendron simsii HOM05D006814 ORTHO05D008613 3.4e-108 395.2 221 83.7
CSS0047525 Camellia sinensis var. sinensis HOM05D006814 ORTHO05D008613 4.5e-108 394.8 221 84.2
Cpa.g.sc87.105 Carica papaya HOM05D006814 ORTHO05D008613 4.5e-108 394.8 221 84.2
Cfa012484 Carpinus fangiana HOM05D006814 ORTHO05D008613 7.7e-108 394.0 221 84.2
Hma1.2p1_0586F.1_g183880 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 7.7e-108 394.0 221 83.7
Manes.02G107600 Manihot esculenta HOM05D006814 ORTHO05D008613 1.3e-107 393.3 221 82.8
TAR629G1931 Trochodendron aralioides HOM05D006814 ORTHO05D008613 1.7e-107 392.9 221 83.3
Nn1g02991 Nelumbo nucifera HOM05D006814 ORTHO05D008613 2.9e-107 392.1 221 82.4
Peaxi162Scf00170g01111 Petunia axillaris HOM05D006814 ORTHO05D008613 2.9e-107 392.1 221 83.3
Gohir.A08G154800 Gossypium hirsutum HOM05D006814 ORTHO05D008613 3.8e-107 391.7 221 81.9
Gohir.D08G175300 Gossypium hirsutum HOM05D006814 ORTHO05D008613 3.8e-107 391.7 221 81.9
PGR031G2224 Punica granatum HOM05D006814 ORTHO05D008613 3.8e-107 391.7 221 83.7
Duzib205G0392 Durio zibethinus HOM05D006814 ORTHO05D008613 8.5e-107 390.6 221 81.9
Nitab4.5_0000685g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 1.1e-106 390.2 221 82.8
Gorai.004G183200 Gossypium raimondii HOM05D006814 ORTHO05D008613 1.4e-106 389.8 221 81.9
Potri.001G139100 Populus trichocarpa HOM05D006814 ORTHO05D008613 1.4e-106 389.8 221 81.9
Actinidia03355 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.5e-106 389.0 221 82.4
GSVIVG01013112001 Vitis vinifera HOM05D006814 ORTHO05D008613 4.2e-106 388.3 221 83.7
Cc08_g03190 Coffea canephora HOM05D006814 ORTHO05D008613 1.2e-105 386.7 223 81.2
Lsat_1_v5_gn_3_19041 Lactuca sativa HOM05D006814 ORTHO05D008613 2.1e-105 386.0 221 81.0
Solyc08g076610.4 Solanum lycopersicum HOM05D006814 ORTHO05D008613 2.7e-105 385.6 221 81.9
Sabra01G0108000 Salix brachista HOM05D006814 ORTHO05D008613 4.7e-105 384.8 221 81.0
PGSC0003DMG400014801 Solanum tuberosum HOM05D006814 ORTHO05D008613 6.1e-105 384.4 221 81.4
HanXRQChr17g0538211 Helianthus annuus HOM05D006814 ORTHO05D008613 8.0e-105 384.0 221 80.5
HanXRQChr17g0538231 Helianthus annuus HOM05D006814 ORTHO05D008613 8.0e-105 384.0 221 80.5
FAN04G0609 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.4e-104 383.3 224 79.0
FAN08G0276 Fragaria x ananassa HOM05D006814 ORTHO05D008613 1.4e-104 383.3 224 79.0
Aa31LG6G500 Aethionema arabicum HOM05D006814 ORTHO05D008613 1.8e-104 382.9 222 79.7
RcHm_v2.0_Chr7g0211071 Rosa chinensis HOM05D006814 ORTHO05D008613 1.8e-104 382.9 213 81.2
Sopen08g025160 Solanum pennellii HOM05D006814 ORTHO05D008613 1.8e-104 382.9 221 81.4
DCAR_032083 Daucus carota HOM05D006814 ORTHO05D008613 2.3e-104 382.5 221 81.0
Aqoxy4G00304 Aquilegia oxysepala HOM05D006814 ORTHO05D008613 3.0e-104 382.1 221 79.6
FAN18G2202 Fragaria x ananassa HOM05D006814 ORTHO05D008613 3.9e-104 381.7 224 78.6
MD11G1183600 Malus domestica HOM05D006814 ORTHO05D008613 3.9e-104 381.7 221 78.7
FAN18G0582 Fragaria x ananassa HOM05D006814 ORTHO05D008613 5.2e-104 381.3 224 78.6
CAN.G298.54 Capsicum annuum HOM05D006814 ORTHO05D008613 6.7e-104 380.9 221 80.5
FvH4_5g22650 Fragaria vesca HOM05D006814 ORTHO05D008613 8.8e-104 380.6 224 78.1
CANSAT21G0682 Cannabis sativa HOM05D006814 ORTHO05D008613 2.6e-103 379.0 217 81.1
Atru.chr6.1626 Acer truncatum HOM05D006814 ORTHO05D008613 5.7e-103 377.9 221 81.0
vmacro00308 Vaccinium macrocarpon HOM05D006814 ORTHO05D008613 5.7e-103 377.9 242 76.0
CARHR224480 Cardamine hirsuta HOM05D006814 ORTHO05D008613 9.7e-103 377.1 222 78.4
AUR62007326 Chenopodium quinoa HOM05D006814 ORTHO05D008613 9.7e-103 377.1 211 82.0
Hund14354 Selenicereus undatus HOM05D006814 ORTHO05D008613 9.7e-103 377.1 221 78.3
BcaC06g33591 Brassica carinata HOM05D006814 ORTHO05D008613 1.3e-102 376.7 222 78.4
BolC7t45420H Brassica oleracea HOM05D006814 ORTHO05D008613 1.3e-102 376.7 222 78.4
BcaNung04035 Brassica carinata HOM05D006814 ORTHO05D008613 2.2e-102 375.9 222 78.4
A03p50690 Brassica napus HOM05D006814 ORTHO05D008613 3.7e-102 375.2 222 78.4
Carub.0007s2360 Capsella rubella HOM05D006814 ORTHO05D008613 4.8e-102 374.8 222 77.0
AL7G36810 Arabidopsis lyrata HOM05D006814 ORTHO05D008613 6.3e-102 374.4 220 77.7
BraA03t14161Z Brassica rapa HOM05D006814 ORTHO05D008613 1.1e-101 373.6 222 77.9
Lj8A305G45 Lonicera japonica HOM05D006814 ORTHO05D008613 1.1e-101 373.6 221 81.0
PSO063G6077 Papaver somniferum HOM05D006814 ORTHO05D008613 1.8e-101 372.9 221 76.5
TWI60G0232 Tripterygium wilfordii HOM05D006814 ORTHO05D008613 1.8e-101 372.9 221 76.9
Thhalv10025847m.g Eutrema salsugineum HOM05D006814 ORTHO05D008613 4.1e-101 371.7 222 77.0
Sp7g16350 Schrenkiella parvula HOM05D006814 ORTHO05D008613 7.0e-101 370.9 222 77.0
THA.LOC104798334 Tarenaya hassleriana HOM05D006814 ORTHO05D008613 2.6e-100 369.0 222 75.7
MSTRG.24841 Avicennia marina HOM05D006814 ORTHO05D008613 1.0e-99 367.1 224 75.9
Sc07g0008590 Simmondsia chinensis HOM05D006814 ORTHO05D008613 3.8e-99 365.2 221 77.4
Migut.A01081 Erythranthe guttata HOM05D006814 ORTHO05D008613 5.0e-99 364.8 225 74.2
Dinv28983 Davidia involucrata HOM05D006814 ORTHO05D008613 8.5e-99 364.0 206 84.0
ECA246G4850 Erigeron canadensis HOM05D006814 ORTHO05D008613 1.5e-98 363.2 233 73.8
C07p49120 Brassica napus HOM05D006814 ORTHO05D008613 1.9e-98 362.8 247 70.4
COL.COLO4_16971 Corchorus olitorius HOM05D006814 ORTHO05D008613 1.9e-98 362.8 199 83.9
Lj3g0020867 Lotus japonicus HOM05D006814 ORTHO05D008613 2.5e-98 362.5 215 79.1
Medtr8g447310 Medicago truncatula HOM05D006814 ORTHO05D008613 5.5e-98 361.3 218 76.6
TPR.G8183 Trifolium pratense HOM05D006814 ORTHO05D008613 9.4e-98 360.5 216 77.8
Oeu005300.2 Olea europaea HOM05D006814 ORTHO05D008613 8.0e-97 357.5 270 65.2
QL12p004459 Quercus lobata HOM05D006814 ORTHO05D008613 8.0e-97 357.5 240 75.4
Ca_26271_v3 Cicer arietinum L. HOM05D006814 ORTHO05D008613 1.0e-96 357.1 218 76.1
VMungo0251G2608 Vigna mungo HOM05D006814 ORTHO05D008613 1.4e-96 356.7 222 75.2
arahy.Tifrunner.gnm1.ann1.DD0PLV Arachis hypogaea HOM05D006814 ORTHO05D008613 1.8e-96 356.3 220 74.1
Haze_08181 Corylus avellana HOM05D006814 ORTHO05D008613 2.3e-96 355.9 223 78.5
arahy.Tifrunner.gnm1.ann1.S7AV19 Arachis hypogaea HOM05D006814 ORTHO05D008613 3.0e-96 355.5 220 73.2
Aa31LG9G8590 Aethionema arabicum HOM05D006814 ORTHO05D008613 5.2e-96 354.8 222 75.2
AUR62018677 Chenopodium quinoa HOM05D006814 ORTHO05D008613 6.7e-96 354.4 221 75.1
Os06g0132600 Oryza sativa ssp. japonica HOM05D006814 ORTHO05D008613 6.7e-96 354.4 220 73.6
SGA_v2.0_scaffold36G14306 Striga asiatica HOM05D006814 ORTHO05D008613 3.3e-95 352.1 252 69.8
HPP92_020943 Vanilla planifolia HOM05D003640 ORTHO05D008613 4.4e-95 351.7 228 71.1
Psat4g131760 Pisum sativum HOM05D006814 ORTHO05D008613 9.7e-95 350.5 218 73.9
Glyma.20G095300 Glycine max HOM05D006814 ORTHO05D008613 4.1e-93 345.1 219 75.8
EL10Ac5g12048 Beta vulgaris HOM05D006814 ORTHO05D008613 5.3e-93 344.7 224 73.7
Eucgr.D02215 Eucalyptus grandis HOM05D006814 ORTHO05D008613 9.1e-93 344.0 200 80.0
CDE11G0551 Ceratophyllum demersum HOM05D006814 ORTHO05D008613 1.2e-92 343.6 221 70.1
Lalb_Chr05g0228761 Lupinus albus HOM05D006814 ORTHO05D008613 2.0e-92 342.8 213 73.7
Zm00001eb269700 Zea mays HOM05D006814 ORTHO05D008613 1.5e-90 336.7 223 70.0
Prupe.4G270400 Prunus persica HOM05D006814 ORTHO05D008613 1.5e-87 326.6 182 83.0
ATR0772G225 Amborella trichopoda HOM05D006814 ORTHO05D008613 7.5e-87 324.3 213 70.9
Phvul.003G283200 Phaseolus vulgaris HOM05D006814 ORTHO05D008613 9.8e-87 323.9 199 77.4
SEGI_31198 Sequoiadendron giganteum HOM05D006814 ORTHO05D008613 2.3e-83 312.8 213 67.6
Pp3c10_20230 Physcomitrium patens HOM05D006814 ORTHO05D008613 1.0e-75 287.3 210 59.0
Nitab4.5_0025014g0010 Nicotiana tabacum HOM05D006814 ORTHO05D008613 8.6e-75 284.3 167 81.4
AagrBONN_evm.TU.Sc2ySwM_228.215 Anthoceros agrestis HOM05D006814 ORTHO05D008613 1.4e-69 266.9 210 57.6
SMO358G0599 Selaginella moellendorffii HOM05D006814 ORTHO05D008613 5.4e-69 265.0 209 59.8
Mapoly0097s0033 Marchantia polymorpha HOM05D006814 ORTHO05D008613 2.0e-68 263.1 211 60.7
GSVIVG01003310001 Vitis vinifera HOM05D006814 ORTHO05D008613 1.6e-60 236.9 149 73.8
CBR_g3124 Chara braunii HOM05D006814 ORTHO05D008613 1.5e-47 193.7 169 53.8
AT4G17760 Arabidopsis thaliana HOM05D006814 ORTHO05D008613 1.4e-45 187.2 109 76.1
Hma1.2p1_0586F.1_g183890 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 6.4e-30 135.2 118 61.9
Actinidia25985 Actinidia chinensis HOM05D006814 ORTHO05D008613 2.5e-26 123.2 72 81.9
Glyma.10G145666 Glycine max HOM05D006814 ORTHO05D008613 3.3e-26 122.9 73 78.1
SalBow6G3153 Salvia bowleyana HOM05D006814 ORTHO05D008613 4.5e-23 112.5 63 77.8
PRCOL_00006064 Prasinoderma coloniale HOM05D006814 ORTHO05D008613 9.9e-23 111.3 207 30.9
Cre03.g162250 Chlamydomonas reinhardtii HOM05D006814 ORTHO05D008613 1.1e-18 97.8 223 28.7
DCAR_021700 Daucus carota HOM05D006814 ORTHO05D013862 2.4e-16 90.1 69 59.4
Hma1.2p1_0572F.1_g181150 Hydrangea macrophylla HOM05D006814 ORTHO05D008613 6.5e-14 82.0 64 62.5
MCO03G144 Micromonas commoda HOM05D006814 ORTHO05D008613 8.4e-14 81.6 234 26.1
EL10As1g23070 Beta vulgaris HOM05D006814 ORTHO05D088401 7.9e-12 75.1 41 85.4


User provided reference genes

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