Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0015016 Sechium edule HOM05D008280 ORTHO05D010492 1.2e-115 419.9 207 100.0
RcHm_v2.0_MTg0498291 Rosa chinensis HOM05D008280 ORTHO05D010492 1.4e-108 396.4 207 94.7
CAN.G1126.5 Capsicum annuum HOM05D008280 ORTHO05D010492 5.5e-105 384.4 207 93.7
CAN.G1159.15 Capsicum annuum HOM05D008280 ORTHO05D010492 5.5e-105 384.4 207 93.7
CAN.G266.10 Capsicum annuum HOM05D008280 ORTHO05D010492 5.5e-105 384.4 207 93.7
Solyc00g020040.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 5.5e-105 384.4 207 93.7
Medtr0141s0020 Medicago truncatula HOM05D008280 ORTHO05D010492 7.1e-105 384.0 207 91.3
TPR.G21718 Trifolium pratense HOM05D008280 ORTHO05D010492 1.2e-104 383.3 207 91.3
BNapus_Darmor_BZH_scaffold_234p00070 Brassica napus HOM05D008280 ORTHO05D010492 2.1e-104 382.5 207 93.2
BolSC28t60354H Brassica oleracea HOM05D008280 ORTHO05D010492 2.1e-104 382.5 207 93.2
BraSC159t45719Z Brassica rapa HOM05D008280 ORTHO05D010492 2.1e-104 382.5 207 93.2
BraSC77t46666Z Brassica rapa HOM05D008280 ORTHO05D010492 2.1e-104 382.5 207 93.2
CARHR282640 Cardamine hirsuta HOM05D008280 ORTHO05D010492 2.1e-104 382.5 207 93.2
Sp3g25740 Schrenkiella parvula HOM05D008280 ORTHO05D010492 2.1e-104 382.5 207 93.2
Lj5g0023723 Lotus japonicus HOM05D008280 ORTHO05D010492 7.9e-104 380.6 207 91.3
LjContig00315g0024501 Lotus japonicus HOM05D008280 ORTHO05D010492 7.9e-104 380.6 207 91.3
DCAR_032445 Daucus carota HOM05D008280 ORTHO05D010492 1.3e-103 379.8 207 92.8
Lj2P1227T101 Lonicera japonica HOM05D008280 ORTHO05D010492 5.1e-103 377.9 207 92.3
Nn1g10160 Nelumbo nucifera HOM05D008280 ORTHO05D010492 6.7e-103 377.5 207 91.3
ATMG00110 Arabidopsis thaliana HOM05D008280 ORTHO05D010492 1.5e-102 376.3 207 92.3
SalBow1G8376 Salvia bowleyana HOM05D008280 ORTHO05D010492 2.5e-102 375.6 207 92.3
CANSAT16G0019 Cannabis sativa HOM05D008280 ORTHO05D010492 5.6e-102 374.4 207 92.8
HanXRQMTg0579251 Helianthus annuus HOM05D008280 ORTHO05D010492 1.3e-101 373.2 207 91.8
Lalb_Chr00c29g0408141 Lupinus albus HOM05D008280 ORTHO05D010492 3.7e-101 371.7 207 88.9
Lsat_1_v5_gn_7_99841 Lactuca sativa HOM05D008280 ORTHO05D010492 2.4e-100 369.0 207 90.8
arahy.Tifrunner.gnm1.ann1.U3KMBF Arachis hypogaea HOM05D008280 ORTHO05D010492 4.5e-99 364.8 195 91.8
BraSC48t46257Z Brassica rapa HOM05D008280 ORTHO05D010492 1.7e-98 362.8 196 92.3
Potri.007G061721 Populus trichocarpa HOM05D008280 ORTHO05D010492 2.2e-98 362.5 207 90.8
CAN.G72.16 Capsicum annuum HOM05D008280 ORTHO05D010492 4.3e-94 348.2 207 86.0
Sed0028122 Sechium edule HOM05D008280 ORTHO05D010492 8.5e-90 334.0 207 82.1
Eucgr.E02151 Eucalyptus grandis HOM05D008280 ORTHO05D010492 5.1e-87 324.7 177 92.1
CAN.G362.37 Capsicum annuum HOM05D008280 ORTHO05D010492 1.0e-82 310.5 207 79.7
Nitab4.5_0001796g0300 Nicotiana tabacum HOM05D008280 ORTHO05D010492 5.1e-79 298.1 207 77.8
arahy.Tifrunner.gnm1.ann1.9X0QWA Arachis hypogaea HOM05D008280 ORTHO05D010492 5.7e-78 294.7 160 90.6
Nitab4.5_0009703g0040 Nicotiana tabacum HOM05D008280 ORTHO05D010492 1.7e-77 293.1 161 89.4
arahy.Tifrunner.gnm1.ann1.TAQ3SD Arachis hypogaea HOM05D008280 ORTHO05D010492 2.8e-77 292.4 160 90.0
Nitab4.5_0004471g0100 Nicotiana tabacum HOM05D008280 ORTHO05D010492 1.5e-75 286.6 177 84.7
MBI05_g23314_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 9.1e-68 260.8 144 91.7
SHI07395 Sapria himalayana HOM05D008280 ORTHO05D010492 1.9e-65 253.1 153 82.4
TAR371G0473 Trochodendron aralioides HOM05D008280 ORTHO05D010492 4.5e-59 231.9 158 79.1
Solyc11g028160.1 Solanum lycopersicum HOM05D008280 ORTHO05D010492 1.2e-56 223.8 146 80.8
Medtr0094s0120 Medicago truncatula HOM05D008280 ORTHO05D010492 8.0e-56 221.1 148 75.0
CAN.G21.55 Capsicum annuum HOM05D008280 ORTHO05D010492 6.5e-50 201.4 114 90.4
Nn7g37645 Nelumbo nucifera HOM05D008280 ORTHO05D010492 7.5e-46 188.0 100 90.0
unitig_87.g27971 Utricularia gibba HOM05D008280 ORTHO05D010492 1.3e-42 177.2 99 91.9
CAN.G676.27 Capsicum annuum HOM05D008280 ORTHO05D010492 3.6e-40 169.1 104 83.7
HanXRQChr05g0151451 Helianthus annuus HOM05D008280 ORTHO05D010492 1.0e-39 167.5 96 85.4
Lsat_1_v5_gn_7_96601 Lactuca sativa HOM05D008280 ORTHO05D010492 5.8e-38 161.8 99 85.9
Nitab4.5_0000978g0030 Nicotiana tabacum HOM05D008280 ORTHO05D010492 3.7e-37 159.1 91 89.0
MBI09_g03548_MAGBIO Magnolia biondii HOM05D008280 ORTHO05D010492 5.4e-36 155.2 123 66.7
Psat1g132520 Pisum sativum HOM05D008280 ORTHO05D010492 3.0e-34 149.4 87 89.7
HanXRQChr03g0087181 Helianthus annuus HOM05D008280 ORTHO05D010492 6.8e-31 138.3 99 76.8
Ca_30339_v3 Cicer arietinum L. HOM05D008280 ORTHO05D010492 2.0e-30 136.7 146 54.8
Gohir.A13G092605 Gossypium hirsutum HOM05D008280 ORTHO05D010492 2.0e-22 110.2 67 88.1
VMungo0985G0011 Vigna mungo HOM05D008696 ORTHO05D002807 3.7e-21 105.9 66 81.8
Lj2C1224T22 Lonicera japonica HOM05D008280 ORTHO05D010492 4.9e-21 105.5 59 89.8
Solyc12g035890.3 Solanum lycopersicum HOM05D000964 ORTHO05D004047 9.5e-17 91.3 58 74.1
QL08p039717 Quercus lobata HOM05D008280 ORTHO05D010492 5.2e-15 85.5 70 68.6
SHI01507 Sapria himalayana HOM05D008280 ORTHO05D010492 3.1e-07 59.7 108 40.7


User provided reference genes

Program Settings