Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 0.0e+00 1086.2 538 100.0
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 3.8e-251 871.3 534 82.8
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 9.4e-250 866.7 583 76.5
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.8e-216 756.1 534 74.2
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 8.7e-179 630.9 549 60.3
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 1.1e-173 614.0 547 58.5
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 1.2e-172 610.5 545 58.2
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 1.0e-171 607.4 530 58.7
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 2.5e-170 602.8 563 57.7
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 3.3e-170 602.4 527 59.0
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 2.4e-168 596.3 530 57.7
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 3.1e-168 595.9 530 57.7
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 5.3e-168 595.1 537 57.9
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 1.2e-167 594.0 516 58.3
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 5.8e-167 591.7 528 59.1
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 2.5e-165 586.3 560 56.8
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 3.2e-165 585.9 551 56.8
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 2.7e-164 582.8 523 57.7
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 3.5e-164 582.4 562 56.8
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 1.8e-163 580.1 563 54.5
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 1.9e-162 576.6 508 57.5
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 2.2e-161 573.2 519 57.2
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 1.8e-160 570.1 537 56.1
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 5.3e-160 568.5 522 56.3
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 9.0e-160 567.8 518 57.3
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 1.2e-159 567.4 549 55.2
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 7.7e-159 564.7 536 56.2
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 7.7e-159 564.7 550 54.7
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 6.5e-158 561.6 539 54.7
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 1.1e-157 560.8 503 57.1
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 1.1e-157 560.8 547 54.8
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 1.9e-157 560.1 613 50.1
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 2.5e-157 559.7 545 54.5
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 2.5e-157 559.7 504 58.5
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 3.2e-157 559.3 506 57.3
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 2.1e-156 556.6 546 53.7
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 6.1e-156 555.1 566 52.7
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 6.1e-156 555.1 503 57.3
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 7.9e-156 554.7 540 54.3
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 1.0e-155 554.3 563 52.8
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 1.0e-155 554.3 527 55.8
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 3.0e-155 552.7 601 51.6
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 5.1e-155 552.0 562 53.4
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 8.8e-155 551.2 496 56.9
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 5.7e-154 548.5 529 53.5
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 7.4e-154 548.1 526 54.9
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 2.2e-153 546.6 502 56.6
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 1.1e-152 544.3 519 55.9
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 5.3e-152 542.0 569 52.4
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 1.5e-151 540.4 563 52.0
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 3.4e-151 539.3 552 52.2
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 1.3e-150 537.3 540 52.6
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 1.4e-149 533.9 590 49.3
Prupe.1G357400 Prunus persica HOM05D005865 ORTHO05D006867 2.7e-148 529.6 416 63.2
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 1.4e-147 527.3 539 51.4
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 2.3e-147 526.6 528 53.6
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 3.0e-147 526.2 516 52.9
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 5.1e-147 525.4 557 50.8
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 1.1e-146 524.2 495 55.8
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 8.2e-145 518.1 511 54.6
Lj4A15G44 Lonicera japonica HOM05D005865 ORTHO05D006867 4.1e-144 515.8 466 58.4
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 3.5e-143 512.7 506 52.2
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 3.5e-143 512.7 495 55.2
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 7.7e-143 511.5 528 51.5
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 7.7e-143 511.5 459 57.5
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 1.0e-142 511.1 511 54.0
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 1.7e-142 510.4 511 54.0
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 2.2e-142 510.0 530 52.1
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 3.8e-142 509.2 497 55.5
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 5.0e-142 508.8 495 55.2
COL.COLO4_26054 Corchorus olitorius HOM05D005865 ORTHO05D006867 8.5e-142 508.1 522 54.6
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 1.5e-141 507.3 495 53.3
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 2.5e-141 506.5 495 55.2
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 4.2e-141 505.8 487 56.1
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 7.2e-141 505.0 495 54.3
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 2.1e-140 503.4 496 55.0
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 4.7e-140 502.3 510 51.4
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 1.8e-139 500.4 504 53.2
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 8.8e-139 498.0 504 53.4
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 4.4e-138 495.7 503 53.1
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 4.4e-138 495.7 503 53.1
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 1.4e-136 490.7 482 52.9
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 5.3e-136 488.8 522 50.4
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 2.2e-134 483.4 524 49.6
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 4.2e-133 479.2 512 49.8
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 5.5e-133 478.8 478 54.2
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 3.0e-131 473.0 495 52.9
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 5.2e-131 472.2 540 49.1
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 1.5e-130 470.7 525 50.7
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 1.8e-128 463.8 538 47.6
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 4.7e-124 449.1 546 47.4
Sc15g0004650 Simmondsia chinensis HOM05D005865 ORTHO05D006867 1.4e-123 447.6 384 59.9
Ca_13490_v3 Cicer arietinum L. HOM05D005865 ORTHO05D006867 2.3e-118 430.3 328 65.9
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 1.1e-117 427.9 557 44.2
A06p16480 Brassica napus HOM05D005865 ORTHO05D006867 1.9e-117 427.2 376 58.2
Hma1.2p1_1100F.1_g257170 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 5.6e-109 399.1 253 72.7
BcaB03g14323 Brassica carinata HOM05D005865 ORTHO05D006867 3.4e-106 389.8 257 72.0
Pp3c20_10980 Physcomitrium patens HOM05D005865 ORTHO05D006867 8.3e-105 385.2 562 39.9
Mapoly0006s0010 Marchantia polymorpha HOM05D005865 ORTHO05D006867 6.0e-103 379.0 533 39.8
AagrBONN_evm.TU.Sc2ySwM_344.4811 Anthoceros agrestis HOM05D005865 ORTHO05D006867 2.1e-100 370.5 543 40.3
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 1.4e-91 341.3 442 46.2
A07p15700 Brassica napus HOM05D005865 ORTHO05D006867 5.8e-90 335.9 211 75.8
Haze_22735 Corylus avellana HOM05D005865 ORTHO05D006867 2.9e-89 333.6 262 63.4
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 3.2e-88 330.1 404 46.5
SMO364G0210 Selaginella moellendorffii HOM05D005865 ORTHO05D006867 2.0e-82 310.8 253 57.3
SEGI_14934 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 7.3e-77 292.4 237 60.8
CBR_g81579 Chara braunii HOM05D005865 ORTHO05D006867 4.2e-72 276.6 458 36.7
BcaC07g42576 Brassica carinata HOM05D005865 ORTHO05D006867 1.1e-67 261.9 246 57.3
PRCOL_00003715 Prasinoderma coloniale HOM05D005865 ORTHO05D006867 1.5e-50 204.9 498 29.9
MCO16G112 Micromonas commoda HOM05D005865 ORTHO05D006867 7.6e-50 202.6 247 40.9
Cpa.g.sc26.238 Carica papaya HOM05D005865 ORTHO05D006867 9.7e-45 185.7 135 63.7
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 2.2e-44 184.5 273 40.3
MELO3C035627.2 Cucumis melo HOM05D005865 ORTHO05D006867 6.3e-44 183.0 223 50.7
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 1.4e-43 181.8 215 48.8
MD15G1004800 Malus domestica HOM05D005865 ORTHO05D006867 6.7e-30 136.3 106 65.1
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 7.4e-29 132.9 193 37.8
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 1.3e-28 132.1 195 40.5
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 1.9e-24 118.2 224 37.1
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 5.5e-24 116.7 118 49.2
MELO3C032646.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.8e-22 111.7 101 57.4
Cre12.g506900 Chlamydomonas reinhardtii HOM05D005865 ORTHO05D006867 8.8e-22 109.4 312 28.2
SEGI_13350 Sequoiadendron giganteum HOM05D005865 ORTHO05D006867 9.7e-21 105.9 140 42.1
MELO3C035121.2 Cucumis melo HOM05D005865 ORTHO05D000044 1.1e-19 102.4 65 80.0
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 3.1e-19 100.9 154 39.0
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 4.1e-19 100.5 241 33.6
Cpa.g.sc26.239 Carica papaya HOM05D005865 ORTHO05D006867 7.2e-16 89.7 43 90.7
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 2.0e-13 81.6 112 42.0
SHI04101 Sapria himalayana HOM05D005865 ORTHO05D006867 4.4e-13 80.5 137 38.7
EL10Ac1g02029 Beta vulgaris HOM05D056011 ORTHO05D006867 1.3e-12 79.0 45 75.6
MELO3C031410.2 Cucumis melo HOM05D005865 ORTHO05D006867 2.8e-12 77.8 111 41.4
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 1.4e-11 75.5 115 34.8


User provided reference genes

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