Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014296 Sechium edule HOM05D006975 ORTHO05D008736 1.2e-166 589.7 295 100.0
ClCG05G018220 Citrullus lanatus HOM05D006975 ORTHO05D008736 2.2e-99 366.3 299 67.2
CsaV3_3G045930 Cucumis sativus L. HOM05D006975 ORTHO05D008736 9.2e-90 334.3 303 64.7
MELO3C003746.2 Cucumis melo HOM05D006975 ORTHO05D008736 1.6e-86 323.6 315 62.2
Sed0023128 Sechium edule HOM05D006975 ORTHO05D008736 4.0e-69 265.8 269 58.4
CiPaw.08G066800 Carya illinoinensis HOM05D006975 ORTHO05D008736 9.0e-69 264.6 298 51.7
Manes.05G146300 Manihot esculenta HOM05D006975 ORTHO05D008736 1.5e-63 247.3 301 49.5
Potri.005G240800 Populus trichocarpa HOM05D006975 ORTHO05D008736 5.6e-63 245.4 297 47.5
MD08G1012000 Malus domestica HOM05D006975 ORTHO05D008736 1.6e-62 243.8 293 50.5
TAR536G0001 Trochodendron aralioides HOM05D006975 ORTHO05D008736 1.6e-62 243.8 299 47.2
Sabra05G0186300 Salix brachista HOM05D006975 ORTHO05D008736 3.7e-62 242.7 298 48.0
GSVIVG01009926001 Vitis vinifera HOM05D006975 ORTHO05D008736 3.7e-62 242.7 302 48.7
Cfa006087 Carpinus fangiana HOM05D006975 ORTHO05D008736 1.8e-61 240.4 306 48.0
Haze_04763 Corylus avellana HOM05D006975 ORTHO05D008736 5.3e-61 238.8 300 48.0
CANSAT25G0709 Cannabis sativa HOM05D006975 ORTHO05D008736 1.2e-60 237.7 301 47.5
Duzib093G1023 Durio zibethinus HOM05D006975 ORTHO05D008736 9.9e-60 234.6 307 47.9
Prupe.1G364300 Prunus persica HOM05D006975 ORTHO05D008736 2.2e-59 233.4 299 48.8
Dinv39526 Davidia involucrata HOM05D006975 ORTHO05D008736 1.4e-58 230.7 299 46.2
Cpa.g.sc26.57 Carica papaya HOM05D006975 ORTHO05D008736 2.1e-57 226.9 304 47.4
Lj5g0003318 Lotus japonicus HOM05D006975 ORTHO05D008736 1.0e-56 224.6 302 45.7
Lj4A797T59 Lonicera japonica HOM05D006975 ORTHO05D008736 1.3e-56 224.2 304 47.0
COL.COLO4_26134 Corchorus olitorius HOM05D006975 ORTHO05D008736 8.7e-56 221.5 306 46.1
CSS0026180 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 1.1e-55 221.1 305 45.9
Gohir.A01G110800 Gossypium hirsutum HOM05D006975 ORTHO05D008736 1.5e-55 220.7 311 45.7
CSS0040454 Camellia sinensis var. sinensis HOM05D006975 ORTHO05D008736 2.5e-55 219.9 305 46.2
RcHm_v2.0_Chr6g0303031 Rosa chinensis HOM05D006975 ORTHO05D008736 4.3e-55 219.2 293 46.8
Gorai.002G123100 Gossypium raimondii HOM05D006975 ORTHO05D008736 9.6e-55 218.0 308 45.5
Phvul.007G020200 Phaseolus vulgaris HOM05D006975 ORTHO05D008736 9.6e-55 218.0 308 46.1
TWI12G0084 Tripterygium wilfordii HOM05D006975 ORTHO05D008736 1.3e-54 217.6 301 45.5
Gohir.D01G097400 Gossypium hirsutum HOM05D006975 ORTHO05D008736 1.6e-54 217.2 303 46.2
Medtr1g112320 Medicago truncatula HOM05D006975 ORTHO05D008736 2.8e-54 216.5 271 48.3
FvH4_2g38330 Fragaria vesca HOM05D006975 ORTHO05D008736 5.3e-53 212.2 290 45.5
Lalb_Chr02g0143331 Lupinus albus HOM05D006975 ORTHO05D008736 5.3e-53 212.2 308 46.8
TPR.G2436 Trifolium pratense HOM05D006975 ORTHO05D008736 9.0e-53 211.5 270 48.9
ECA232G2413 Erigeron canadensis HOM05D006975 ORTHO05D008736 1.5e-52 210.7 299 43.8
VMungo0720G0770 Vigna mungo HOM05D006975 ORTHO05D008736 1.5e-52 210.7 301 45.8
Actinidia15428 Actinidia chinensis HOM05D006975 ORTHO05D008736 3.4e-52 209.5 224 54.0
BolC1t01871H Brassica oleracea HOM05D006975 ORTHO05D008736 3.4e-52 209.5 309 43.0
Thecc.08G046000 Theobroma cacao HOM05D006975 ORTHO05D008736 3.4e-52 209.5 252 50.4
Nn1g05932 Nelumbo nucifera HOM05D006975 ORTHO05D008736 4.5e-52 209.1 302 44.7
SGA_v2.0_scaffold11G05927 Striga asiatica HOM05D006975 ORTHO05D008736 4.5e-52 209.1 320 42.8
C01p19420 Brassica napus HOM05D006975 ORTHO05D008736 7.6e-52 208.4 309 43.0
AL7G29110 Arabidopsis lyrata HOM05D006975 ORTHO05D008736 1.0e-51 208.0 308 42.5
Ca_11200_v3 Cicer arietinum L. HOM05D006975 ORTHO05D008736 1.0e-51 208.0 297 45.1
THA.LOC104798667 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 1.0e-51 208.0 219 51.6
Psat6g231560 Pisum sativum HOM05D006975 ORTHO05D008736 1.7e-51 207.2 273 47.3
Ciclev10001912m.g Citrus clementina HOM05D006975 ORTHO05D008736 2.2e-51 206.8 307 44.6
arahy.Tifrunner.gnm1.ann1.Z9XT7U Arachis hypogaea HOM05D006975 ORTHO05D008736 8.4e-51 204.9 218 56.0
BcaC09g50900 Brassica carinata HOM05D006975 ORTHO05D008736 1.1e-50 204.5 238 48.7
QL02p011816 Quercus lobata HOM05D006975 ORTHO05D008736 1.1e-50 204.5 360 38.3
PSO675G8288 Papaver somniferum HOM05D006975 ORTHO05D008736 2.5e-50 203.4 224 50.9
MBI05_g19267_MAGBIO Magnolia biondii HOM05D006975 ORTHO05D008736 3.2e-50 203.0 275 46.5
HanXRQChr05g0145201 Helianthus annuus HOM05D006975 ORTHO05D008736 4.2e-50 202.6 311 43.1
BraA01t01489Z Brassica rapa HOM05D006975 ORTHO05D008736 7.1e-50 201.8 234 48.3
Cc10_g01570 Coffea canephora HOM05D006975 ORTHO05D008736 4.6e-49 199.1 305 41.6
Atru.chr13.277_Atru.chr13.278 Acer truncatum HOM05D006975 ORTHO05D008736 7.9e-49 198.4 297 44.8
MSTRG.1185 Avicennia marina HOM05D006975 ORTHO05D008736 7.9e-49 198.4 296 42.6
PGR031G2234 Punica granatum HOM05D006975 ORTHO05D008736 7.9e-49 198.4 314 42.4
Sopen04g035150 Solanum pennellii HOM05D006975 ORTHO05D008736 1.3e-48 197.6 304 42.1
CARHR231580 Cardamine hirsuta HOM05D006975 ORTHO05D008736 1.8e-48 197.2 309 42.7
FAN20G0256 Fragaria x ananassa HOM05D006975 ORTHO05D008736 2.3e-48 196.8 297 43.4
Glyma.20G108900 Glycine max HOM05D006975 ORTHO05D008736 3.0e-48 196.4 291 44.0
Oeu027521.1 Olea europaea HOM05D006975 ORTHO05D008736 3.0e-48 196.4 217 51.2
Solyc04g081540.3 Solanum lycopersicum HOM05D006975 ORTHO05D008736 3.0e-48 196.4 304 42.1
Migut.C00848 Erythranthe guttata HOM05D006975 ORTHO05D008736 5.1e-48 195.7 293 43.3
Thhalv10025797m.g Eutrema salsugineum HOM05D006975 ORTHO05D008736 1.1e-47 194.5 322 41.3
AT4G24175 Arabidopsis thaliana HOM05D006975 ORTHO05D008736 1.5e-47 194.1 316 41.5
BcaNung01123 Brassica carinata HOM05D006975 ORTHO05D008736 1.5e-47 194.1 215 49.8
Nitab4.5_0008000g0010 Nicotiana tabacum HOM05D006975 ORTHO05D008736 1.5e-47 194.1 303 42.2
Aqoxy6G02228 Aquilegia oxysepala HOM05D006975 ORTHO05D008736 1.9e-47 193.7 209 51.7
PSO541G1271 Papaver somniferum HOM05D006975 ORTHO05D008736 1.9e-47 193.7 237 46.8
FAN15G2275 Fragaria x ananassa HOM05D006975 ORTHO05D008736 4.3e-47 192.6 289 43.6
PGSC0003DMG401009870 Solanum tuberosum HOM05D006975 ORTHO05D008736 5.7e-47 192.2 301 41.2
Aa31sc424G20 Aethionema arabicum HOM05D006975 ORTHO05D008736 7.4e-47 191.8 313 41.2
DCAR_021031 Daucus carota HOM05D006975 ORTHO05D008736 7.4e-47 191.8 225 48.4
EL10Ac1g02185 Beta vulgaris HOM05D006975 ORTHO05D008736 2.2e-46 190.3 234 48.3
Hma1.2p1_0023F.1_g015550 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 2.2e-46 190.3 236 47.0
CDE04G0963 Ceratophyllum demersum HOM05D006975 ORTHO05D008736 6.3e-46 188.7 240 47.5
Hund05184 Selenicereus undatus HOM05D006975 ORTHO05D008736 1.4e-45 187.6 237 45.1
A01p15500 Brassica napus HOM05D006975 ORTHO05D008736 1.8e-45 187.2 261 43.3
Os04g0250700 Oryza sativa ssp. japonica HOM05D006975 ORTHO05D008736 1.8e-45 187.2 258 43.8
HPP92_004984 Vanilla planifolia HOM05D006975 ORTHO05D008736 1.8e-45 187.2 278 45.0
Rhsim06G0020700 Rhododendron simsii HOM05D006975 ORTHO05D008736 3.1e-45 186.4 386 36.5
Eucgr.H00993 Eucalyptus grandis HOM05D006975 ORTHO05D008736 6.9e-45 185.3 197 52.3
Zm00001eb086730 Zea mays HOM05D006975 ORTHO05D008736 6.9e-45 185.3 239 47.7
Sp7g22140 Schrenkiella parvula HOM05D006975 ORTHO05D008736 2.6e-44 183.3 280 42.1
Carub.0007s1692 Capsella rubella HOM05D006975 ORTHO05D008736 1.7e-43 180.6 315 40.6
MD08G1011800 Malus domestica HOM05D006975 ORTHO05D008736 1.1e-42 177.9 201 53.7
Lsat_1_v5_gn_0_34641 Lactuca sativa HOM05D006975 ORTHO05D008736 2.5e-42 176.8 278 41.4
unitig_748.g7725 Utricularia gibba HOM05D006975 ORTHO05D008736 1.2e-41 174.5 205 48.8
Atru.chr13.275 Acer truncatum HOM05D006975 ORTHO05D008736 7.9e-41 171.8 204 50.0
FAN27G0483 Fragaria x ananassa HOM05D006975 ORTHO05D008736 2.3e-40 170.2 214 46.7
CAN.G311.39 Capsicum annuum HOM05D006975 ORTHO05D008736 1.5e-39 167.5 327 36.4
AUR62035015 Chenopodium quinoa HOM05D006975 ORTHO05D008736 2.5e-39 166.8 215 43.7
arahy.Tifrunner.gnm1.ann1.Y91ZV9 Arachis hypogaea HOM05D006975 ORTHO05D008736 9.1e-37 158.3 304 40.5
Peaxi162Scf00553g00101 Petunia axillaris HOM05D006975 ORTHO05D008736 4.5e-36 156.0 198 47.5
vmacro07578 Vaccinium macrocarpon HOM05D006975 ORTHO05D008736 1.7e-30 137.5 356 33.1
Hma1.2p1_0023F.1_g015540 Hydrangea macrophylla HOM05D006975 ORTHO05D008736 3.7e-30 136.3 278 37.4
AUR62041899 Chenopodium quinoa HOM05D006975 ORTHO05D008736 2.0e-28 130.6 180 43.3
Mapoly0138s0045 Marchantia polymorpha HOM05D006975 ORTHO05D008736 1.3e-27 127.9 224 34.4
Pp3c5_3830 Physcomitrium patens HOM05D006975 ORTHO05D008736 7.2e-26 122.1 167 41.9
THA.LOC104798678 Tarenaya hassleriana HOM05D006975 ORTHO05D008736 1.4e-24 117.9 217 37.8
ATR0564G524 Amborella trichopoda HOM05D006975 ORTHO05D008736 2.0e-20 104.0 260 32.3
Eucgr.H00979 Eucalyptus grandis HOM05D006975 ORTHO05D008736 6.8e-16 89.0 119 42.9
TAR628G0560 Trochodendron aralioides HOM05D006975 ORTHO05D008736 1.5e-15 87.8 134 40.3
SEGI_37599 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 9.7e-15 85.1 60 65.0
TAR381G1583 Trochodendron aralioides HOM05D006975 ORTHO05D008736 8.3e-14 82.0 160 35.6
CBR_g44391 Chara braunii HOM05D006975 ORTHO05D008736 4.1e-13 79.7 115 39.1
CDE02G4250 Ceratophyllum demersum HOM05D000565 ORTHO05D004389 2.0e-12 77.4 107 43.0
arahy.Tifrunner.gnm1.ann1.1D0YR0 Arachis hypogaea HOM05D006975 ORTHO05D008736 5.9e-12 75.9 129 40.3
Eucgr.F00575 Eucalyptus grandis HOM05D006975 ORTHO05D008736 2.2e-11 73.9 71 53.5
Eucgr.F00573 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.1e-10 71.6 154 33.8
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 9.4e-10 68.6 126 40.5
Pp3c8_21620 Physcomitrium patens HOM05D003148 ORTHO05D003894 9.4e-10 68.6 149 30.9
Pp3c24_16390 Physcomitrium patens HOM05D003148 ORTHO05D003894 1.4e-08 64.7 120 31.7
Eucgr.H00986 Eucalyptus grandis HOM05D006975 ORTHO05D008736 1.2e-07 61.6 39 74.4
SEGI_16371 Sequoiadendron giganteum HOM05D006975 ORTHO05D008736 5.7e-07 59.3 96 36.5
Eucgr.H00983 Eucalyptus grandis HOM05D006975 ORTHO05D008736 4.8e-06 56.2 55 50.9


User provided reference genes

Program Settings