Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014124 Sechium edule HOM05D007177 ORTHO05D008984 1.1e-164 583.2 290 100.0
CsaV3_2G031600 Cucumis sativus L. HOM05D007177 ORTHO05D008984 9.9e-137 490.3 297 83.5
MELO3C011212.2 Cucumis melo HOM05D007177 ORTHO05D008984 1.6e-134 483.0 297 82.8
ClCG08G012880 Citrullus lanatus HOM05D007177 ORTHO05D008984 6.4e-120 434.5 365 66.3
CiPaw.08G015800 Carya illinoinensis HOM05D007177 ORTHO05D008984 6.0e-118 427.9 290 74.5
Dinv35881 Davidia involucrata HOM05D007177 ORTHO05D008984 1.0e-117 427.2 273 76.9
QL12p031282 Quercus lobata HOM05D007177 ORTHO05D008984 1.9e-116 422.9 255 80.8
CiPaw.07G217700 Carya illinoinensis HOM05D007177 ORTHO05D008984 5.6e-116 421.4 273 76.6
Atru.chr7.2324 Acer truncatum HOM05D007177 ORTHO05D008984 9.6e-116 420.6 290 73.8
Ciclev10009098m.g Citrus clementina HOM05D007177 ORTHO05D008984 9.6e-116 420.6 290 71.4
TAR383G0793 Trochodendron aralioides HOM05D007177 ORTHO05D008984 6.2e-115 417.9 279 74.9
Manes.16G068300 Manihot esculenta HOM05D007177 ORTHO05D008984 1.1e-114 417.2 292 72.9
Sabra06G0192800 Salix brachista HOM05D007177 ORTHO05D008984 3.1e-114 415.6 294 70.4
GSVIVG01035726001 Vitis vinifera HOM05D007177 ORTHO05D008984 1.0e-112 410.6 290 71.0
Potri.006G246500 Populus trichocarpa HOM05D007177 ORTHO05D008984 2.2e-112 409.5 294 70.1
Hma1.2p1_0175F.1_g077220 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 3.8e-112 408.7 279 73.1
CANSAT25G2101 Cannabis sativa HOM05D007177 ORTHO05D008984 4.2e-111 405.2 275 74.2
Lj7A712G53 Lonicera japonica HOM05D007177 ORTHO05D008984 6.0e-110 401.4 275 72.4
Eucgr.G02593 Eucalyptus grandis HOM05D007177 ORTHO05D008984 1.3e-109 400.2 254 77.2
CSS0040333 Camellia sinensis var. sinensis HOM05D007177 ORTHO05D008984 1.8e-109 399.8 290 69.7
Migut.A00273 Erythranthe guttata HOM05D007177 ORTHO05D008984 1.9e-108 396.4 285 69.5
MD08G1136300 Malus domestica HOM05D007177 ORTHO05D008984 5.7e-108 394.8 258 74.0
Nn8g39274 Nelumbo nucifera HOM05D007177 ORTHO05D008984 9.6e-108 394.0 286 71.7
TWI32G0279 Tripterygium wilfordii HOM05D007177 ORTHO05D008984 1.3e-107 393.7 260 73.8
RcHm_v2.0_Chr6g0312741 Rosa chinensis HOM05D007177 ORTHO05D008984 1.6e-107 393.3 276 71.4
Solyc08g067840.3 Solanum lycopersicum HOM05D007177 ORTHO05D008984 8.2e-107 391.0 257 75.5
Duzib168G0166 Durio zibethinus HOM05D007177 ORTHO05D008984 1.1e-106 390.6 257 75.5
Gohir.D06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.1e-106 390.6 297 68.4
Gorai.010G053800 Gossypium raimondii HOM05D007177 ORTHO05D008984 1.1e-106 390.6 297 68.4
Lsat_1_v5_gn_6_10880 Lactuca sativa HOM05D003107 ORTHO05D008984 1.1e-106 390.6 246 75.6
Nitab4.5_0000125g0190 Nicotiana tabacum HOM05D007177 ORTHO05D008984 1.4e-106 390.2 295 67.8
SalBow4G1425 Salvia bowleyana HOM05D007177 ORTHO05D008984 1.4e-106 390.2 260 72.3
Sopen08g021780 Solanum pennellii HOM05D007177 ORTHO05D008984 1.8e-106 389.8 257 75.5
ECA233G2849 Erigeron canadensis HOM05D003107 ORTHO05D008984 5.3e-106 388.3 289 67.1
CAN.G21.13 Capsicum annuum HOM05D007177 ORTHO05D008984 6.9e-106 387.9 292 68.5
Gohir.A06G048000 Gossypium hirsutum HOM05D007177 ORTHO05D008984 9.0e-106 387.5 265 72.5
Thecc.09G144000 Theobroma cacao HOM05D007177 ORTHO05D008984 9.0e-106 387.5 294 68.4
FAN27G1396 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.2e-105 387.1 293 66.9
FvH4_2g30170 Fragaria vesca HOM05D007177 ORTHO05D008984 2.0e-105 386.3 293 66.6
MSTRG.11740 Avicennia marina HOM05D007177 ORTHO05D008984 5.9e-105 384.8 260 73.5
DCAR_006262 Daucus carota HOM05D007177 ORTHO05D008984 1.3e-104 383.6 290 67.9
THA.LOC104815045 Tarenaya hassleriana HOM05D007177 ORTHO05D008984 5.0e-104 381.7 290 66.9
Lalb_Chr23g0269021 Lupinus albus HOM05D007177 ORTHO05D008984 6.5e-104 381.3 274 70.8
Rhsim02G0187100 Rhododendron simsii HOM05D007177 ORTHO05D008984 8.5e-104 380.9 289 67.8
AUR62032383 Chenopodium quinoa HOM05D007177 ORTHO05D008984 1.4e-103 380.2 292 66.4
MD15G1115400 Malus domestica HOM05D007177 ORTHO05D008984 1.9e-103 379.8 256 72.7
vmacro11111 Vaccinium macrocarpon HOM05D007177 ORTHO05D008984 2.5e-103 379.4 292 66.4
Cc08_g08290 Coffea canephora HOM05D007177 ORTHO05D008984 4.2e-103 378.6 253 73.9
Glyma.06G073600 Glycine max HOM05D007177 ORTHO05D008984 5.5e-103 378.3 284 68.3
Hund26404 Selenicereus undatus HOM05D007177 ORTHO05D008984 5.5e-103 378.3 266 70.7
Aa31LG3G15740 Aethionema arabicum HOM05D007177 ORTHO05D008984 7.2e-103 377.9 259 72.2
HanXRQChr02g0048101 Helianthus annuus HOM05D007177 ORTHO05D008984 7.2e-103 377.9 266 69.5
Nitab4.5_0009600g0010 Nicotiana tabacum HOM05D007177 ORTHO05D008984 9.3e-103 377.5 292 66.8
Ah.10g025430 Amaranthus hybridus HOM05D007177 ORTHO05D008984 2.7e-102 375.9 247 74.9
arahy.Tifrunner.gnm1.ann1.JYH77Y Arachis hypogaea HOM05D007177 ORTHO05D008984 3.6e-102 375.6 247 76.5
Peaxi162Scf00105g01429 Petunia axillaris HOM05D007177 ORTHO05D008984 3.6e-102 375.6 237 77.6
BcaC04g19225 Brassica carinata HOM05D007177 ORTHO05D008984 7.9e-102 374.4 247 74.9
A10p26300 Brassica napus HOM05D007177 ORTHO05D008984 7.9e-102 374.4 246 75.6
C09p65410 Brassica napus HOM05D007177 ORTHO05D008984 7.9e-102 374.4 247 74.9
BolC9t59366H Brassica oleracea HOM05D007177 ORTHO05D008984 7.9e-102 374.4 247 74.9
BraA10t44687Z Brassica rapa HOM05D007177 ORTHO05D008984 7.9e-102 374.4 246 75.6
Phvul.009G098000 Phaseolus vulgaris HOM05D007177 ORTHO05D008984 7.9e-102 374.4 300 65.3
Sp6g32150 Schrenkiella parvula HOM05D007177 ORTHO05D008984 1.8e-101 373.2 302 64.6
Thhalv10014231m.g Eutrema salsugineum HOM05D007177 ORTHO05D008984 2.3e-101 372.9 301 65.8
BcaB08g37058 Brassica carinata HOM05D007177 ORTHO05D008984 8.7e-101 370.9 301 63.8
VMungo1309G2383 Vigna mungo HOM05D007177 ORTHO05D008984 2.5e-100 369.4 274 68.6
Lj1g0018262 Lotus japonicus HOM05D007177 ORTHO05D008984 3.7e-99 365.5 281 64.8
Carub.0006s0990 Capsella rubella HOM05D007177 ORTHO05D008984 4.8e-99 365.2 299 64.2
unitig_748.g7498 Utricularia gibba HOM05D007177 ORTHO05D008984 4.8e-99 365.2 252 71.0
AUR62024834 Chenopodium quinoa HOM05D007177 ORTHO05D008984 2.4e-98 362.8 309 60.8
AL6G22110 Arabidopsis lyrata HOM05D007177 ORTHO05D008984 6.9e-98 361.3 301 63.1
Cpa.g.sc91.5 Carica papaya HOM05D007177 ORTHO05D008984 6.9e-98 361.3 217 80.2
CARHR201780 Cardamine hirsuta HOM05D007177 ORTHO05D008984 4.5e-97 358.6 298 62.8
AT5G11450 Arabidopsis thaliana HOM05D007177 ORTHO05D008984 7.7e-97 357.8 302 62.9
Actinidia13290 Actinidia chinensis HOM05D007177 ORTHO05D008984 2.9e-96 355.9 258 69.4
Zm00001eb159760 Zea mays HOM05D007177 ORTHO05D008984 2.1e-94 349.7 241 69.7
Os01g0617900 Oryza sativa ssp. japonica HOM05D007177 ORTHO05D008984 2.0e-92 343.2 261 66.3
TPR.G34677 Trifolium pratense HOM05D007177 ORTHO05D008984 2.0e-92 343.2 270 65.6
Zm00001eb358300 Zea mays HOM05D007177 ORTHO05D008984 1.3e-91 340.5 304 60.2
PSO063G2030 Papaver somniferum HOM05D007177 ORTHO05D008984 2.8e-91 339.3 302 60.3
PSO782G2748 Papaver somniferum HOM05D007177 ORTHO05D008984 3.7e-91 339.0 302 60.3
CDE01G0003 Ceratophyllum demersum HOM05D007177 ORTHO05D008984 3.1e-90 335.9 279 60.6
Medtr3g108040 Medicago truncatula HOM05D007177 ORTHO05D008984 5.3e-90 335.1 219 74.0
arahy.Tifrunner.gnm1.ann1.22L7FB Arachis hypogaea HOM05D007177 ORTHO05D008984 1.5e-89 333.6 295 62.0
HPP92_021881 Vanilla planifolia HOM05D007177 ORTHO05D008984 8.5e-88 327.8 258 62.0
Glyma.04G072300 Glycine max HOM05D007177 ORTHO05D008984 2.5e-87 326.2 258 66.7
FAN24G2430 Fragaria x ananassa HOM05D007177 ORTHO05D008984 1.4e-85 320.5 262 64.9
Psat5g027720 Pisum sativum HOM05D007177 ORTHO05D008984 3.0e-85 319.3 211 71.6
COL.COLO4_24067 Corchorus olitorius HOM05D007177 ORTHO05D008984 5.2e-85 318.5 258 65.1
Prupe.1G466600 Prunus persica HOM05D007177 ORTHO05D008984 2.0e-84 316.6 206 76.7
PGR102G2243 Punica granatum HOM05D007177 ORTHO05D008984 4.1e-82 308.9 287 56.8
Haze_21624 Corylus avellana HOM05D007177 ORTHO05D008984 7.7e-81 304.7 238 67.2
Aqoxy7G01836 Aquilegia oxysepala HOM05D007177 ORTHO05D008984 8.5e-80 301.2 264 61.0
FAN20G1087 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.7e-78 296.2 261 61.7
FAN15G3007 Fragaria x ananassa HOM05D007177 ORTHO05D008984 2.3e-77 293.1 261 61.3
Pp3c27_2770 Physcomitrium patens HOM05D007177 ORTHO05D008984 7.0e-74 281.6 289 51.9
ATR0037G062 Amborella trichopoda HOM05D007177 ORTHO05D008984 5.9e-73 278.5 183 70.5
EL10Ac2g02536 Beta vulgaris HOM05D007177 ORTHO05D008984 5.9e-73 278.5 304 53.0
AUR62011224 Chenopodium quinoa HOM05D007177 ORTHO05D008984 7.7e-73 278.1 288 54.2
Cfa013211 Carpinus fangiana HOM05D007177 ORTHO05D008984 1.9e-71 273.5 156 86.5
Ca_15697_v3 Cicer arietinum L. HOM05D007177 ORTHO05D008984 2.5e-71 273.1 193 72.5
Mapoly0103s0019 Marchantia polymorpha HOM05D007177 ORTHO05D008984 2.7e-70 269.6 256 53.1
SGA_v2.0_scaffold27G11496 Striga asiatica HOM05D007177 ORTHO05D008984 3.6e-70 269.2 263 58.2
Sc23g0007000 Simmondsia chinensis HOM05D007177 ORTHO05D008984 3.0e-53 213.0 174 62.6
SEGI_07055 Sequoiadendron giganteum HOM05D007177 ORTHO05D008984 1.9e-42 177.2 129 65.1
Gohir.D06G048101 Gossypium hirsutum HOM05D007177 ORTHO05D008984 1.3e-40 171.0 101 74.3
Cre07.g328200 Chlamydomonas reinhardtii HOM05D007177 ORTHO05D008984 4.4e-36 156.0 234 38.5
Hma1.2p1_0175F.1_g077230 Hydrangea macrophylla HOM05D007177 ORTHO05D008984 3.2e-34 149.8 107 67.3
MCO07G393 Micromonas commoda HOM05D007177 ORTHO05D008984 1.1e-26 124.8 196 36.2
Actinidia13424 Actinidia chinensis HOM05D007177 ORTHO05D008984 3.4e-12 76.6 56 71.4
AagrBONN_evm.TU.Sc2ySwM_117.3794 Anthoceros agrestis HOM05D007177 ORTHO05D008984 4.5e-12 76.3 101 43.6


User provided reference genes

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