Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0014118 Sechium edule HOM05D004382 ORTHO05D005181 7.7e-71 270.4 139 100.0
Sed0025739 Sechium edule HOM05D004382 ORTHO05D005181 2.3e-67 258.8 139 94.2
ClCG07G010700 Citrullus lanatus HOM05D004382 ORTHO05D005181 4.4e-66 254.6 139 94.2
CsaV3_4G007600 Cucumis sativus L. HOM05D004382 ORTHO05D005181 2.4e-64 248.8 139 92.1
Glyma.08G173700 Glycine max HOM05D004382 ORTHO05D005181 2.7e-60 235.3 140 86.4
arahy.Tifrunner.gnm1.ann1.HCTL36 Arachis hypogaea HOM05D004382 ORTHO05D005181 2.3e-59 232.3 140 85.0
arahy.Tifrunner.gnm1.ann1.9QX17Y Arachis hypogaea HOM05D004382 ORTHO05D005181 3.0e-59 231.9 140 85.0
Phvul.005G055200 Phaseolus vulgaris HOM05D004382 ORTHO05D005181 4.0e-59 231.5 140 85.0
VMungo1080G1647 Vigna mungo HOM05D004382 ORTHO05D005181 6.8e-59 230.7 140 84.3
Glyma.15G253700 Glycine max HOM05D004382 ORTHO05D005181 1.2e-58 229.9 140 86.4
Gohir.D05G330700 Gossypium hirsutum HOM05D004382 ORTHO05D005181 4.4e-58 228.0 141 85.8
Gorai.009G354500 Gossypium raimondii HOM05D004382 ORTHO05D005181 4.4e-58 228.0 141 85.8
PGR142G2616 Punica granatum HOM05D004382 ORTHO05D005181 7.5e-58 227.3 140 85.7
TWI38G0625 Tripterygium wilfordii HOM05D004382 ORTHO05D005181 1.3e-57 226.5 140 82.1
CANSAT56G1367 Cannabis sativa HOM05D004382 ORTHO05D005181 1.7e-57 226.1 140 85.0
Nitab4.5_0002475g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 1.7e-57 226.1 140 82.9
TWI38G0568 Tripterygium wilfordii HOM05D004382 ORTHO05D005181 1.7e-57 226.1 140 81.4
CiPaw.11G067100 Carya illinoinensis HOM05D004382 ORTHO05D005181 3.7e-57 224.9 140 83.6
Cc05_g15930 Coffea canephora HOM05D004382 ORTHO05D005181 4.9e-57 224.6 140 82.9
QL04p074767 Quercus lobata HOM05D004382 ORTHO05D005181 6.3e-57 224.2 139 84.9
GSVIVG01020484001 Vitis vinifera HOM05D004382 ORTHO05D005181 8.3e-57 223.8 140 82.1
Gohir.A04G050200 Gossypium hirsutum HOM05D004382 ORTHO05D005181 1.8e-56 222.6 141 83.7
Oeu003841.1 Olea europaea HOM05D004382 ORTHO05D005181 2.4e-56 222.2 142 82.4
Nitab4.5_0000313g0040 Nicotiana tabacum HOM05D004382 ORTHO05D005181 4.1e-56 221.5 140 82.9
FvH4_3g16050 Fragaria vesca HOM05D004382 ORTHO05D005181 5.4e-56 221.1 140 82.1
FAN11G1612 Fragaria x ananassa HOM05D004382 ORTHO05D005181 5.4e-56 221.1 140 82.1
MSTRG.7052 Avicennia marina HOM05D004382 ORTHO05D005181 7.0e-56 220.7 136 84.6
Oeu002809.1 Olea europaea HOM05D004382 ORTHO05D005181 1.6e-55 219.5 140 80.0
MD05G1215200 Malus domestica HOM05D004382 ORTHO05D005181 2.0e-55 219.2 141 82.3
Prupe.4G143700 Prunus persica HOM05D004382 ORTHO05D005181 2.7e-55 218.8 140 81.4
Actinidia37109 Actinidia chinensis HOM05D004382 ORTHO05D005181 4.5e-55 218.0 142 82.4
Nitab4.5_0000134g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 4.5e-55 218.0 138 82.6
Lj3g0019499 Lotus japonicus HOM05D004382 ORTHO05D005181 5.9e-55 217.6 140 80.7
CSS0016237 Camellia sinensis var. sinensis HOM05D004382 ORTHO05D005181 1.3e-54 216.5 136 82.4
CAN.G943.25 Capsicum annuum HOM05D004382 ORTHO05D005181 1.3e-54 216.5 139 81.3
Peaxi162Scf00006g00149 Petunia axillaris HOM05D004382 ORTHO05D005181 1.3e-54 216.5 141 81.6
Sabra11G0127600 Salix brachista HOM05D004382 ORTHO05D005181 1.3e-54 216.5 140 80.0
COL.COLO4_05073 Corchorus olitorius HOM05D004382 ORTHO05D005181 1.7e-54 216.1 142 80.3
Solyc07g066310.3 Solanum lycopersicum HOM05D004382 ORTHO05D005181 1.7e-54 216.1 140 80.7
Sopen07g034490 Solanum pennellii HOM05D004382 ORTHO05D005181 1.7e-54 216.1 140 80.7
PGSC0003DMG400022241 Solanum tuberosum HOM05D004382 ORTHO05D005181 3.8e-54 214.9 140 80.0
FAN25G3309 Fragaria x ananassa HOM05D004382 ORTHO05D005181 5.0e-54 214.5 140 80.0
Thecc.07G156900 Theobroma cacao HOM05D004382 ORTHO05D005181 5.0e-54 214.5 141 83.0
Sc16g0003480 Simmondsia chinensis HOM05D004382 ORTHO05D005181 1.1e-53 213.4 138 82.6
unitig_8.g4771 Utricularia gibba HOM05D004382 ORTHO05D005181 1.1e-53 213.4 140 75.7
Aa31LG4G1950 Aethionema arabicum HOM05D004382 ORTHO05D005181 1.9e-53 212.6 142 81.7
Ah.08g216320 Amaranthus hybridus HOM05D004382 ORTHO05D005181 1.9e-53 212.6 139 77.0
FAN21G1818 Fragaria x ananassa HOM05D004382 ORTHO05D005181 1.9e-53 212.6 140 79.3
SalBow8G0430 Salvia bowleyana HOM05D004382 ORTHO05D005181 1.9e-53 212.6 140 79.3
C06p30200 Brassica napus HOM05D004382 ORTHO05D005181 2.5e-53 212.2 142 81.0
BolC6t38183H Brassica oleracea HOM05D004382 ORTHO05D005181 2.5e-53 212.2 142 81.0
CSS0001445 Camellia sinensis var. sinensis HOM05D004382 ORTHO05D005181 2.5e-53 212.2 141 81.6
Hma1.2p1_0193F.1_g084500 Hydrangea macrophylla HOM05D004382 ORTHO05D005181 2.5e-53 212.2 141 80.1
SGA_v2.0_scaffold49G18168 Striga asiatica HOM05D004382 ORTHO05D005181 2.5e-53 212.2 140 80.7
BcaC03g15860 Brassica carinata HOM05D004382 ORTHO05D005181 3.3e-53 211.8 141 81.6
BcaC08g45389 Brassica carinata HOM05D004382 ORTHO05D005181 3.3e-53 211.8 142 81.0
A02p22470 Brassica napus HOM05D004382 ORTHO05D005181 3.3e-53 211.8 141 81.6
C02p36150 Brassica napus HOM05D004382 ORTHO05D005181 3.3e-53 211.8 141 81.6
BolC2t09629H Brassica oleracea HOM05D004382 ORTHO05D005181 3.3e-53 211.8 141 81.6
BraA02t07252Z Brassica rapa HOM05D004382 ORTHO05D005181 3.3e-53 211.8 141 81.6
AUR62004366 Chenopodium quinoa HOM05D004382 ORTHO05D005181 4.3e-53 211.5 141 78.0
RcHm_v2.0_Chr5g0027021 Rosa chinensis HOM05D004382 ORTHO05D005181 4.3e-53 211.5 140 79.3
Potri.011G142300 Populus trichocarpa HOM05D004382 ORTHO05D005181 5.6e-53 211.1 138 82.6
Ciclev10022793m.g Citrus clementina HOM05D004382 ORTHO05D005181 7.2e-53 210.7 141 82.3
Eucgr.F01447 Eucalyptus grandis HOM05D004382 ORTHO05D005181 7.2e-53 210.7 156 76.3
AT1G79040 Arabidopsis thaliana HOM05D004382 ORTHO05D005181 1.2e-52 209.9 141 80.1
BcaB02g08662 Brassica carinata HOM05D004382 ORTHO05D005181 1.2e-52 209.9 141 79.4
Potri.001G438800 Populus trichocarpa HOM05D004382 ORTHO05D005181 1.6e-52 209.5 140 80.0
CARHR072720 Cardamine hirsuta HOM05D004382 ORTHO05D005181 2.1e-52 209.1 141 79.4
BcaC08g47468 Brassica carinata HOM05D004382 ORTHO05D005181 2.8e-52 208.8 141 78.7
C06p52920 Brassica napus HOM05D004382 ORTHO05D005181 2.8e-52 208.8 141 78.7
BolC6t40310H Brassica oleracea HOM05D004382 ORTHO05D005181 2.8e-52 208.8 141 78.7
A07p44190 Brassica napus HOM05D004382 ORTHO05D005181 3.6e-52 208.4 141 78.7
BraA07t31927Z Brassica rapa HOM05D004382 ORTHO05D005181 3.6e-52 208.4 141 78.7
Carub.0002s2591 Capsella rubella HOM05D004382 ORTHO05D005181 3.6e-52 208.4 141 79.4
Nn3g20146 Nelumbo nucifera HOM05D002089 ORTHO05D011346 3.6e-52 208.4 137 77.4
BcaB02g07194 Brassica carinata HOM05D004382 ORTHO05D005181 4.7e-52 208.0 142 79.6
BcaB05g25168 Brassica carinata HOM05D004382 ORTHO05D005181 4.7e-52 208.0 142 79.6
AUR62022575 Chenopodium quinoa HOM05D004382 ORTHO05D005181 4.7e-52 208.0 141 77.3
Duzib187G1376 Durio zibethinus HOM05D004382 ORTHO05D005181 4.7e-52 208.0 140 80.0
Peaxi162Scf00232g01129 Petunia axillaris HOM05D004382 ORTHO05D005181 4.7e-52 208.0 140 76.4
Sp5g34090 Schrenkiella parvula HOM05D004382 ORTHO05D005181 6.1e-52 207.6 142 78.9
A07p27340 Brassica napus HOM05D004382 ORTHO05D005181 8.0e-52 207.2 142 79.6
BraA07t30375Z Brassica rapa HOM05D004382 ORTHO05D005181 8.0e-52 207.2 142 79.6
Thhalv10019302m.g Eutrema salsugineum HOM05D004382 ORTHO05D005181 1.0e-51 206.8 142 78.2
ECA236G0888 Erigeron canadensis HOM05D004382 ORTHO05D005181 1.8e-51 206.1 139 74.1
Potri.001G438700 Populus trichocarpa HOM05D004382 ORTHO05D005181 1.8e-51 206.1 140 77.1
Medtr2g064650 Medicago truncatula HOM05D004382 ORTHO05D005181 2.3e-51 205.7 140 80.0
MSTRG.14535 Avicennia marina HOM05D004382 ORTHO05D005181 3.0e-51 205.3 141 79.4
TPR.G10344 Trifolium pratense HOM05D004382 ORTHO05D005181 5.2e-51 204.5 140 78.6
Gorai.002G032900 Gossypium raimondii HOM05D004382 ORTHO05D005181 1.2e-50 203.4 145 77.2
Lalb_Chr03g0031561 Lupinus albus HOM05D004382 ORTHO05D005181 1.2e-50 203.4 143 74.1
ClCG11G016280 Citrullus lanatus HOM05D004382 ORTHO05D005181 1.5e-50 203.0 141 75.9
Nitab4.5_0001791g0030 Nicotiana tabacum HOM05D004382 ORTHO05D005181 1.5e-50 203.0 140 78.6
Lalb_Chr25g0285191 Lupinus albus HOM05D004382 ORTHO05D005181 2.0e-50 202.6 141 75.2
Manes.15G102500 Manihot esculenta HOM05D004382 ORTHO05D005181 2.0e-50 202.6 142 77.5
Lalb_Chr01g0015971 Lupinus albus HOM05D004382 ORTHO05D005181 2.6e-50 202.2 134 80.6
MD10G1198300 Malus domestica HOM05D004382 ORTHO05D005181 2.6e-50 202.2 141 77.3
Rhsim04G0006200 Rhododendron simsii HOM05D004382 ORTHO05D005181 2.6e-50 202.2 135 80.0
Potri.011G142200 Populus trichocarpa HOM05D004382 ORTHO05D005181 3.4e-50 201.8 140 75.7
SalBow5G1313 Salvia bowleyana HOM05D004382 ORTHO05D005181 5.7e-50 201.1 140 76.4
SalBow5G2519 Salvia bowleyana HOM05D004382 ORTHO05D005181 5.7e-50 201.1 140 76.4
Migut.H01700 Erythranthe guttata HOM05D004382 ORTHO05D005181 9.8e-50 200.3 140 75.0
Hma1.2p1_0321F.1_g124500 Hydrangea macrophylla HOM05D004382 ORTHO05D005181 9.8e-50 200.3 141 76.6
Ca_03704_v3 Cicer arietinum L. HOM05D004382 ORTHO05D005181 1.3e-49 199.9 140 76.4
EL10Ac4g08547 Beta vulgaris HOM05D004382 ORTHO05D005181 1.7e-49 199.5 141 76.6
Atru.chr2.1854 Acer truncatum HOM05D004382 ORTHO05D005181 2.9e-49 198.7 140 80.0
AL2G39500 Arabidopsis lyrata HOM05D004382 ORTHO05D005181 4.9e-49 198.0 133 79.7
HanXRQChr08g0232801 Helianthus annuus HOM05D004382 ORTHO05D005181 4.9e-49 198.0 139 74.8
MBI02_g25371_MAGBIO Magnolia biondii HOM05D004382 ORTHO05D005181 6.4e-49 197.6 140 75.0
Gohir.A01G037100 Gossypium hirsutum HOM05D004382 ORTHO05D005181 1.1e-48 196.8 145 74.5
Psat1g002320 Pisum sativum HOM05D004382 ORTHO05D005181 1.1e-48 196.8 140 75.0
THA.LOC104812349 Tarenaya hassleriana HOM05D004382 ORTHO05D005181 1.8e-48 196.1 140 75.7
vmacro09788 Vaccinium macrocarpon HOM05D004382 ORTHO05D005181 2.4e-48 195.7 141 74.5
Sed0016780 Sechium edule HOM05D004382 ORTHO05D005181 2.0e-47 192.6 133 73.7
Hund10309 Selenicereus undatus HOM05D004382 ORTHO05D005181 2.0e-47 192.6 139 71.9
CDE04G0985 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 2.7e-47 192.2 136 73.5
HanXRQChr05g0160651 Helianthus annuus HOM05D004382 ORTHO05D005181 2.7e-47 192.2 140 72.1
DCAR_016816 Daucus carota HOM05D004382 ORTHO05D005181 4.6e-47 191.4 139 72.7
ATR1098G153 Amborella trichopoda HOM05D004382 ORTHO05D005181 7.8e-47 190.7 142 73.9
Manes.03G082900 Manihot esculenta HOM05D004382 ORTHO05D005181 1.0e-46 190.3 141 76.6
CDE12G0390 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 1.3e-46 189.9 136 72.1
Aqoxy1G01569 Aquilegia oxysepala HOM05D004382 ORTHO05D005181 1.7e-46 189.5 141 70.2
DCAR_013749 Daucus carota HOM05D004382 ORTHO05D005181 5.0e-46 188.0 142 73.2
Solyc12g017250.2 Solanum lycopersicum HOM05D004382 ORTHO05D005181 6.6e-46 187.6 135 71.9
Sopen12g008070 Solanum pennellii HOM05D004382 ORTHO05D005181 1.1e-45 186.8 135 72.6
TAR627G0744 Trochodendron aralioides HOM05D004382 ORTHO05D005181 4.3e-45 184.9 135 74.1
HPP92_016563 Vanilla planifolia HOM05D004382 ORTHO05D005181 1.6e-44 183.0 139 71.2
DCAR_009633 Daucus carota HOM05D004382 ORTHO05D005181 6.2e-44 181.0 142 71.8
Os08g0200300 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 6.8e-43 177.6 136 69.1
Sabra11G0127700 Salix brachista HOM05D004382 ORTHO05D005181 2.0e-42 176.0 140 71.4
CDE11G0376 Ceratophyllum demersum HOM05D004382 ORTHO05D005181 5.8e-42 174.5 139 66.2
Eucgr.F03186 Eucalyptus grandis HOM05D004382 ORTHO05D005181 6.4e-41 171.0 109 78.9
PSO541G3267 Papaver somniferum HOM05D004382 ORTHO05D005181 6.4e-41 171.0 140 67.1
PSO675G7775 Papaver somniferum HOM05D004382 ORTHO05D005181 6.4e-41 171.0 140 67.1
Zm00001eb171230 Zea mays HOM05D004382 ORTHO05D005181 8.3e-41 170.6 136 69.1
Lsat_1_v5_gn_7_116120 Lactuca sativa HOM05D004382 ORTHO05D005181 9.2e-40 167.2 140 66.4
Sabra16G0296700 Salix brachista HOM05D004382 ORTHO05D005181 2.0e-39 166.0 161 62.7
vmacro11652 Vaccinium macrocarpon HOM05D004382 ORTHO05D005181 3.0e-38 162.2 155 64.5
Dinv19628 Davidia involucrata HOM05D006828 ORTHO05D008312 3.9e-38 161.8 88 89.8
Os07g0147550 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 2.5e-37 159.1 141 61.7
Rhsim06G0237200 Rhododendron simsii HOM05D006828 ORTHO05D008312 2.5e-37 159.1 91 85.7
MELO3C016181.2 Cucumis melo HOM05D004382 ORTHO05D005181 5.6e-37 157.9 89 91.0
Gohir.D01G024400 Gossypium hirsutum HOM05D004382 ORTHO05D005181 1.1e-35 153.7 115 73.0
Os07g0147500 Oryza sativa ssp. japonica HOM05D004382 ORTHO05D005181 8.9e-35 150.6 138 58.0
SEGI_14655 Sequoiadendron giganteum HOM05D004382 ORTHO05D005181 4.4e-34 148.3 136 58.8
Mapoly0001s0109 Marchantia polymorpha HOM05D004382 ORTHO05D005181 2.9e-33 145.6 118 65.3
PGSC0003DMG400002312 Solanum tuberosum HOM05D004382 ORTHO05D005181 6.4e-33 144.4 135 62.2
MBI18_g37150_MAGBIO Magnolia biondii HOM05D004382 ORTHO05D005181 4.1e-32 141.7 140 59.3
SMO134G0197 Selaginella moellendorffii HOM05D004382 ORTHO05D005181 5.4e-32 141.4 136 58.1
Cpa.g.c37194 Carica papaya HOM05D004382 ORTHO05D005181 3.5e-31 138.7 90 82.2
AagrBONN_evm.TU.Sc2ySwM_228.2640 Anthoceros agrestis HOM05D004382 ORTHO05D005181 1.5e-29 133.3 138 54.3
Mapoly0006s0055 Marchantia polymorpha HOM05D004382 ORTHO05D005181 1.9e-29 132.9 115 60.9
Pp3c27_2340 Physcomitrium patens HOM05D004382 ORTHO05D005181 7.3e-29 131.0 137 54.7
Pp3c16_5650 Physcomitrium patens HOM05D004382 ORTHO05D005181 6.2e-28 127.9 146 52.7
Pp3c27_2320 Physcomitrium patens HOM05D004382 ORTHO05D005181 1.4e-27 126.7 110 65.5
Pp3c5_4230 Physcomitrium patens HOM05D004382 ORTHO05D005181 1.8e-27 126.3 117 61.5
PGR083G0343 Punica granatum HOM05D004382 ORTHO05D005181 6.8e-27 124.4 90 75.6
Cpa.g.c38697 Carica papaya HOM05D004382 ORTHO05D005181 3.9e-22 108.6 53 96.2
PRCOL_00003342 Prasinoderma coloniale HOM05D004382 ORTHO05D005181 1.2e-20 103.6 88 56.8
Haze_08525 Corylus avellana HOM05D004382 ORTHO05D005181 8.1e-20 100.9 141 49.6
CBR_g30109 Chara braunii HOM05D000004 ORTHO05D000002 1.8e-19 99.8 66 69.7
Atru.chr6.732 Acer truncatum HOM05D004382 ORTHO05D005181 1.1e-16 90.5 81 66.7
Cre06.g261000 Chlamydomonas reinhardtii HOM05D004382 ORTHO05D005181 2.4e-16 89.4 138 44.9
TAR626G0945 Trochodendron aralioides HOM05D004382 ORTHO05D005181 2.7e-15 85.9 73 63.0
TPR.G25891 Trifolium pratense HOM05D004382 ORTHO05D005181 5.4e-08 61.6 136 41.2


User provided reference genes

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