Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0013824 Sechium edule HOM05D002215 ORTHO05D002238 8.1e-73 276.9 137 100.0
ClCG11G005940 Citrullus lanatus HOM05D002215 ORTHO05D002238 2.7e-28 129.0 145 57.2
CsaV3_6G002060 Cucumis sativus L. HOM05D002215 ORTHO05D002238 2.7e-28 129.0 145 57.9
MELO3C019981.2 Cucumis melo HOM05D002215 ORTHO05D002238 1.4e-27 126.7 145 56.6
Sed0027929 Sechium edule HOM05D002215 ORTHO05D002238 1.3e-22 110.2 145 52.4
vmacro06913 Vaccinium macrocarpon HOM05D002215 ORTHO05D002238 1.6e-15 86.7 139 42.4
COL.COLO4_25812 Corchorus olitorius HOM05D002215 ORTHO05D002238 5.9e-15 84.7 135 44.4
Dinv21802 Davidia involucrata HOM05D002215 ORTHO05D002238 5.9e-15 84.7 143 41.3
Gohir.A05G332200 Gossypium hirsutum HOM05D002215 ORTHO05D002238 5.9e-15 84.7 137 43.8
TAR633G2515 Trochodendron aralioides HOM05D002215 ORTHO05D002238 7.7e-15 84.3 144 42.4
Hma1.2p1_1687F.1_g297530 Hydrangea macrophylla HOM05D002215 ORTHO05D002238 1.0e-14 84.0 149 41.6
Thecc.10G008600 Theobroma cacao HOM05D002215 ORTHO05D002238 2.2e-14 82.8 136 44.9
Ciclev10033013m.g Citrus clementina HOM05D002215 ORTHO05D002238 3.8e-14 82.0 144 42.4
Cfa001247 Carpinus fangiana HOM05D002215 ORTHO05D002238 6.5e-14 81.3 149 39.6
Haze_17303 Corylus avellana HOM05D002215 ORTHO05D002238 6.5e-14 81.3 149 40.3
Gohir.D04G070900 Gossypium hirsutum HOM05D002215 ORTHO05D002238 8.5e-14 80.9 137 43.1
Gorai.012G079800 Gossypium raimondii HOM05D002215 ORTHO05D002238 1.1e-13 80.5 137 43.1
Dinv10569 Davidia involucrata HOM05D002215 ORTHO05D002238 2.5e-13 79.3 145 40.7
CSS0029123 Camellia sinensis var. sinensis HOM05D002215 ORTHO05D002238 3.2e-13 79.0 131 44.3
QL08p064088 Quercus lobata HOM05D002215 ORTHO05D002238 9.4e-13 77.4 146 40.4
QL08p064121 Quercus lobata HOM05D002215 ORTHO05D002238 9.4e-13 77.4 146 40.4
Lalb_Chr04g0250361 Lupinus albus HOM05D002215 ORTHO05D002238 1.2e-12 77.0 149 40.9
FAN10G1531 Fragaria x ananassa HOM05D002215 ORTHO05D002238 1.6e-12 76.6 154 40.9
HanXRQChr07g0203511 Helianthus annuus HOM05D002215 ORTHO05D002238 1.6e-12 76.6 144 43.8
TAR636G1645 Trochodendron aralioides HOM05D002215 ORTHO05D002238 2.1e-12 76.3 142 41.5
MD07G1228500 Malus domestica HOM05D002215 ORTHO05D002238 2.7e-12 75.9 154 39.0
CiPaw.01G302900 Carya illinoinensis HOM05D002215 ORTHO05D002238 3.6e-12 75.5 148 39.2
Gorai.013G015700 Gossypium raimondii HOM05D002215 ORTHO05D002238 6.1e-12 74.7 135 43.7
Gohir.D13G014500 Gossypium hirsutum HOM05D002215 ORTHO05D002238 8.0e-12 74.3 135 43.7
TWI09G1319 Tripterygium wilfordii HOM05D002215 ORTHO05D002238 8.0e-12 74.3 139 42.4
MBI03_g43457_MAGBIO Magnolia biondii HOM05D002215 ORTHO05D002238 1.4e-11 73.6 147 40.1
Duzib128G1130 Durio zibethinus HOM05D002215 ORTHO05D002238 1.8e-11 73.2 135 40.7
FAN03G0867 Fragaria x ananassa HOM05D002215 ORTHO05D002238 1.8e-11 73.2 155 38.7
Hund13523 Selenicereus undatus HOM05D002215 ORTHO05D002238 2.3e-11 72.8 151 41.1
FAN01G0927 Fragaria x ananassa HOM05D002215 ORTHO05D002238 5.2e-11 71.6 151 39.7
Manes.07G136300 Manihot esculenta HOM05D002215 ORTHO05D002238 5.2e-11 71.6 144 41.7
Rhsim03G0148500 Rhododendron simsii HOM05D002215 ORTHO05D002238 5.2e-11 71.6 145 40.7
FvH4_7g25400 Fragaria vesca HOM05D002215 ORTHO05D002238 6.8e-11 71.2 158 38.6
FAN06G2085 Fragaria x ananassa HOM05D002215 ORTHO05D002238 6.8e-11 71.2 157 38.9
Actinidia33892 Actinidia chinensis HOM05D002215 ORTHO05D002238 8.8e-11 70.9 129 43.4
MD01G1160300 Malus domestica HOM05D002215 ORTHO05D002238 1.2e-10 70.5 155 37.4
TWI73G0816 Tripterygium wilfordii HOM05D002215 ORTHO05D002238 1.5e-10 70.1 152 38.8
RcHm_v2.0_Chr1g0371351 Rosa chinensis HOM05D002215 ORTHO05D002238 2.0e-10 69.7 158 38.6
GSVIVG01032732001 Vitis vinifera HOM05D002215 ORTHO05D002238 2.0e-10 69.7 145 39.3
arahy.Tifrunner.gnm1.ann1.P9D87U Arachis hypogaea HOM05D002215 ORTHO05D002238 2.6e-10 69.3 135 41.5
Gohir.A13G013400 Gossypium hirsutum HOM05D002215 ORTHO05D002238 3.4e-10 68.9 135 42.2
CANSAT56G1677 Cannabis sativa HOM05D002215 ORTHO05D002238 4.4e-10 68.6 134 40.3
arahy.Tifrunner.gnm1.ann1.914GI4 Arachis hypogaea HOM05D002215 ORTHO05D002238 7.5e-10 67.8 135 40.7
Sc11g0005540 Simmondsia chinensis HOM05D002215 ORTHO05D002238 9.8e-10 67.4 150 40.0
Lsat_1_v5_gn_2_125820 Lactuca sativa HOM05D002215 ORTHO05D002238 1.3e-09 67.0 131 43.5
PGSC0003DMG400023945 Solanum tuberosum HOM05D002215 ORTHO05D002238 1.7e-09 66.6 129 39.5
Cpa.g.sc19.111 Carica papaya HOM05D002215 ORTHO05D002238 2.2e-09 66.2 148 39.9
CDE06G0538 Ceratophyllum demersum HOM05D002215 ORTHO05D002238 2.2e-09 66.2 143 36.4
Prupe.2G258200 Prunus persica HOM05D002215 ORTHO05D002238 2.2e-09 66.2 156 37.8
Oeu039378.1 Olea europaea HOM05D002215 ORTHO05D002238 2.8e-09 65.9 129 41.1
CDE07G0432 Ceratophyllum demersum HOM05D002215 ORTHO05D002238 3.7e-09 65.5 143 38.5
Psat5g185000 Pisum sativum HOM05D002215 ORTHO05D002238 3.7e-09 65.5 141 38.3
ECA238G1451 Erigeron canadensis HOM05D002215 ORTHO05D002238 1.1e-08 63.9 144 38.9
Medtr5g083690 Medicago truncatula HOM05D002215 ORTHO05D002238 1.1e-08 63.9 137 40.9
Eucgr.G03104 Eucalyptus grandis HOM05D002215 ORTHO05D002238 1.4e-08 63.5 154 38.3
Potri.008G074600 Populus trichocarpa HOM05D002215 ORTHO05D002238 1.8e-08 63.2 143 37.1
Sopen06g016260 Solanum pennellii HOM05D002215 ORTHO05D002238 1.8e-08 63.2 129 38.0
Aqoxy4G02187 Aquilegia oxysepala HOM05D002215 ORTHO05D002238 2.4e-08 62.8 150 35.3
Ca_06009_v3 Cicer arietinum L. HOM05D002215 ORTHO05D002238 2.4e-08 62.8 150 41.3
PGR142G1630 Punica granatum HOM05D002215 ORTHO05D002238 2.4e-08 62.8 147 37.4
Peaxi162Scf00284g00234 Petunia axillaris HOM05D002215 ORTHO05D002238 4.1e-08 62.0 129 38.0
LjContig00357g0021340 Lotus japonicus HOM05D002215 ORTHO05D002238 5.4e-08 61.6 148 37.8
Nitab4.5_0002854g0070 Nicotiana tabacum HOM05D002215 ORTHO05D002238 5.4e-08 61.6 131 38.2
EL10Ac2g04915 Beta vulgaris HOM05D002215 ORTHO05D002238 1.2e-07 60.5 139 41.0
SalBow3G0904 Salvia bowleyana HOM05D002215 ORTHO05D002238 1.2e-07 60.5 132 38.6
Sabra10G0140200 Salix brachista HOM05D002215 ORTHO05D002238 2.0e-07 59.7 142 36.6
Ah.16g104020 Amaranthus hybridus HOM05D002215 ORTHO05D002238 2.7e-07 59.3 154 40.3
Nitab4.5_0001291g0080 Nicotiana tabacum HOM05D002215 ORTHO05D002238 3.5e-07 58.9 134 36.6
VMungo0647G1981 Vigna mungo HOM05D002215 ORTHO05D002238 3.5e-07 58.9 138 38.4
DCAR_024798 Daucus carota HOM05D002215 ORTHO05D002238 4.5e-07 58.5 137 38.0
THA.LOC104816525 Tarenaya hassleriana HOM05D002215 ORTHO05D002238 5.9e-07 58.2 154 35.7
SGA_v2.0_scaffold44G16651 Striga asiatica HOM05D002215 ORTHO05D002238 7.7e-07 57.8 134 38.8
Glyma.02G260800 Glycine max HOM05D002215 ORTHO05D002238 1.0e-06 57.4 130 37.7
Potri.010G182800 Populus trichocarpa HOM05D002215 ORTHO05D002238 2.9e-06 55.8 140 36.4
Migut.F00617 Erythranthe guttata HOM05D002215 ORTHO05D002238 8.6e-06 54.3 139 36.0


User provided reference genes

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