Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0013701 Sechium edule HOM05D001969 ORTHO05D009003 3.3e-68 261.5 129 100.0
Manes.13G150950 Manihot esculenta HOM05D001969 ORTHO05D009003 3.4e-36 155.2 128 62.5
RcHm_v2.0_Chr2g0127151 Rosa chinensis HOM05D001969 ORTHO05D009003 1.7e-35 152.9 112 62.5
Sed0009336 Sechium edule HOM05D001969 ORTHO05D009003 3.7e-35 151.8 88 80.7
DCAR_011200 Daucus carota HOM05D001969 ORTHO05D009003 1.1e-34 150.2 105 61.0
CANSAT21G1059 Cannabis sativa HOM05D001969 ORTHO05D009003 3.2e-31 138.7 88 64.8
CANSAT78G0375 Cannabis sativa HOM05D001969 ORTHO05D003463 3.6e-30 135.2 88 63.6
MD09G1092600 Malus domestica HOM05D001969 ORTHO05D009003 1.0e-29 133.7 89 66.3
FAN05G0495 Fragaria x ananassa HOM05D001969 ORTHO05D003463 1.4e-29 133.3 84 66.7
TAR629G1647 Trochodendron aralioides HOM05D001969 ORTHO05D009003 1.8e-29 132.9 90 67.8
MD17G1082700 Malus domestica HOM05D001969 ORTHO05D009003 4.0e-29 131.7 89 65.2
QL08p048209 Quercus lobata HOM05D001969 ORTHO05D009003 5.2e-29 131.3 87 63.2
TAR627G0343 Trochodendron aralioides HOM05D001969 ORTHO05D009003 5.2e-29 131.3 89 70.8
TAR627G0582 Trochodendron aralioides HOM05D001969 ORTHO05D009003 5.2e-29 131.3 89 70.8
Atru.chr6.3054 Acer truncatum HOM05D001969 ORTHO05D009003 8.8e-29 130.6 90 65.6
Dinv23700 Davidia involucrata HOM05D001969 ORTHO05D009003 1.5e-28 129.8 89 66.3
ECA233G3782 Erigeron canadensis HOM05D001969 ORTHO05D009003 1.5e-28 129.8 92 63.0
HanXRQChr09g0274351 Helianthus annuus HOM05D001969 ORTHO05D009003 1.5e-28 129.8 92 62.0
Cc11_g01780 Coffea canephora HOM05D001969 ORTHO05D009003 2.0e-28 129.4 89 68.5
Cfa003704 Carpinus fangiana HOM05D001969 ORTHO05D009003 2.6e-28 129.0 83 68.7
ECA236G1367 Erigeron canadensis HOM05D001969 ORTHO05D009003 3.4e-28 128.6 92 63.0
HanXRQChr11g0350221 Helianthus annuus HOM05D001969 ORTHO05D009003 3.4e-28 128.6 92 62.0
Thecc.02G172900 Theobroma cacao HOM05D001969 ORTHO05D009003 3.4e-28 128.6 90 64.4
Lju41E32T0 Lonicera japonica HOM05D001969 ORTHO05D009003 4.4e-28 128.3 89 66.3
Nn1g06730 Nelumbo nucifera HOM05D001969 ORTHO05D009003 4.4e-28 128.3 89 68.5
Ciclev10017445m.g Citrus clementina HOM05D001969 ORTHO05D003463 5.7e-28 127.9 98 59.2
Cc11_g01770 Coffea canephora HOM05D001969 ORTHO05D009003 9.8e-28 127.1 89 66.3
HanXRQChr06g0167021 Helianthus annuus HOM05D001969 ORTHO05D009003 9.8e-28 127.1 92 62.0
COL.COLO4_13690 Corchorus olitorius HOM05D001969 ORTHO05D009003 1.3e-27 126.7 90 63.3
MSTRG.23988 Avicennia marina HOM05D001969 ORTHO05D009003 1.7e-27 126.3 89 62.9
CiPaw.16G086600 Carya illinoinensis HOM05D001969 ORTHO05D009003 1.7e-27 126.3 88 68.2
Lsat_1_v5_gn_2_3941 Lactuca sativa HOM05D001969 ORTHO05D009003 1.7e-27 126.3 100 56.0
Nn1g03931 Nelumbo nucifera HOM05D001969 ORTHO05D009003 2.8e-27 125.6 89 66.3
TWI18G1087 Tripterygium wilfordii HOM05D001969 ORTHO05D009003 2.8e-27 125.6 117 52.1
Oeu047331.1 Olea europaea HOM05D001969 ORTHO05D009003 6.3e-27 124.4 89 64.0
Potri.013G145800 Populus trichocarpa HOM05D001969 ORTHO05D009003 6.3e-27 124.4 89 66.3
VMungo1127G0255 Vigna mungo HOM05D001969 ORTHO05D009003 8.3e-27 124.0 89 59.6
Lsat_1_v5_gn_3_137700 Lactuca sativa HOM05D001969 ORTHO05D009003 1.1e-26 123.6 119 48.7
Gohir.D02G182700 Gossypium hirsutum HOM05D001969 ORTHO05D009003 1.4e-26 123.2 90 61.1
Lalb_Chr19g0135421 Lupinus albus HOM05D001969 ORTHO05D009003 2.4e-26 122.5 88 58.0
MBI04_g38761_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 2.4e-26 122.5 89 61.8
CSS0025708 Camellia sinensis var. sinensis HOM05D001969 ORTHO05D009003 3.1e-26 122.1 83 63.9
Glyma.09G257600 Glycine max HOM05D001969 ORTHO05D009003 7.0e-26 120.9 89 56.2
Gohir.A03G159600 Gossypium hirsutum HOM05D001969 ORTHO05D009003 7.0e-26 120.9 90 62.2
Phvul.011G177800 Phaseolus vulgaris HOM05D001969 ORTHO05D009003 7.0e-26 120.9 88 59.1
PGR142G0421 Punica granatum HOM05D001969 ORTHO05D003463 7.0e-26 120.9 76 71.1
Aqoxy6G02660 Aquilegia oxysepala HOM05D001969 ORTHO05D009003 9.2e-26 120.6 89 64.0
Glyma.18G235000 Glycine max HOM05D001969 ORTHO05D009003 9.2e-26 120.6 89 58.4
TPR.G31971 Trifolium pratense HOM05D001669 ORTHO05D006496 9.2e-26 120.6 91 53.8
vmacro09267 Vaccinium macrocarpon HOM05D001969 ORTHO05D009003 9.2e-26 120.6 85 60.0
Duzib248G0251 Durio zibethinus HOM05D001969 ORTHO05D009003 1.6e-25 119.8 90 58.9
SGA_v2.0_scaffold135G34841 Striga asiatica HOM05D001969 ORTHO05D009003 1.6e-25 119.8 89 59.6
Nitab4.5_0003069g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 2.0e-25 119.4 89 59.6
MBI06_g08467_MAGBIO Magnolia biondii HOM05D001969 ORTHO05D009003 2.7e-25 119.0 88 60.2
Nitab4.5_0006575g0040 Nicotiana tabacum HOM05D001969 ORTHO05D009003 2.7e-25 119.0 89 58.4
Migut.H00150 Erythranthe guttata HOM05D001969 ORTHO05D009003 5.9e-25 117.9 89 59.6
SGA_v2.0_scaffold3G01553 Striga asiatica HOM05D001969 ORTHO05D009003 7.8e-25 117.5 80 61.2
Actinidia39674 Actinidia chinensis HOM05D001969 ORTHO05D003463 1.3e-24 116.7 82 61.0
CsaV3_6G012510 Cucumis sativus L. HOM05D001969 ORTHO05D003463 1.7e-24 116.3 63 81.0
Manes.06G013500 Manihot esculenta HOM05D001969 ORTHO05D009003 1.7e-24 116.3 87 59.8
Rhsim04G0021700 Rhododendron simsii HOM05D001969 ORTHO05D009003 2.9e-24 115.5 85 60.0
SalBow7G2523 Salvia bowleyana HOM05D001969 ORTHO05D009003 2.9e-24 115.5 90 57.8
unitig_748.g8143 Utricularia gibba HOM05D001969 ORTHO05D009003 2.9e-24 115.5 88 62.5
Actinidia39300 Actinidia chinensis HOM05D001969 ORTHO05D009003 3.8e-24 115.2 89 60.7
Eucgr.K00935 Eucalyptus grandis HOM05D001969 ORTHO05D009003 5.0e-24 114.8 90 58.9
SalBow1G0343 Salvia bowleyana HOM05D001969 ORTHO05D009003 8.6e-24 114.0 84 57.1
SalBow7G4035 Salvia bowleyana HOM05D001969 ORTHO05D009003 8.6e-24 114.0 84 57.1
Haze_15783 Corylus avellana HOM05D001969 ORTHO05D009003 1.5e-23 113.2 73 67.1
THA.LOC104811178 Tarenaya hassleriana HOM05D001969 ORTHO05D009003 1.9e-23 112.8 112 42.0
Solyc07g064840.3 Solanum lycopersicum HOM05D001969 ORTHO05D009003 3.3e-23 112.1 80 56.2
Sopen07g033040 Solanum pennellii HOM05D001969 ORTHO05D009003 9.5e-23 110.5 80 56.2
PGSC0003DMG400022306 Solanum tuberosum HOM05D001969 ORTHO05D009003 9.5e-23 110.5 80 56.2
Zm00001eb414500 Zea mays HOM05D001969 ORTHO05D009003 9.5e-23 110.5 87 52.9
AUR62029451 Chenopodium quinoa HOM05D001969 ORTHO05D009003 1.2e-22 110.2 78 62.8
ATR1001G005 Amborella trichopoda HOM05D001969 ORTHO05D009003 2.8e-22 109.0 90 54.4
Zm00001eb225500 Zea mays HOM05D001969 ORTHO05D009003 2.8e-22 109.0 86 52.3
Aa31LG9G15650 Aethionema arabicum HOM05D001969 ORTHO05D009003 3.6e-22 108.6 107 43.0
Zm00001eb194600 Zea mays HOM05D001969 ORTHO05D009003 3.6e-22 108.6 86 52.3
Zm00001eb194610 Zea mays HOM05D001969 ORTHO05D009003 6.1e-22 107.8 86 51.2
Nitab4.5_0003358g0010 Nicotiana tabacum HOM05D001969 ORTHO05D009003 8.0e-22 107.5 80 53.8
Peaxi162Scf00423g00066 Petunia axillaris HOM05D001969 ORTHO05D009003 8.0e-22 107.5 88 51.1
EL10Ac3g05654 Beta vulgaris HOM05D001969 ORTHO05D003463 1.4e-21 106.7 79 58.2
CDE04G1317 Ceratophyllum demersum HOM05D004539 ORTHO05D009003 1.4e-21 106.7 72 65.3
Nitab4.5_0002260g0270 Nicotiana tabacum HOM05D001969 ORTHO05D009003 1.4e-21 106.7 80 55.0
Zm00001eb072880 Zea mays HOM05D001969 ORTHO05D009003 1.8e-21 106.3 86 51.2
CAN.G1310.15 Capsicum annuum HOM05D001969 ORTHO05D009003 2.3e-21 105.9 84 51.2
CAN.G1720.5 Capsicum annuum HOM05D001969 ORTHO05D009003 5.2e-21 104.8 84 51.2
GSVIVG01030575001 Vitis vinifera HOM05D001969 ORTHO05D009003 5.2e-21 104.8 70 64.3
SEGI_26592 Sequoiadendron giganteum HOM05D001969 ORTHO05D009003 8.9e-21 104.0 100 45.0
Zm00001eb350110 Zea mays HOM05D001969 ORTHO05D009003 8.9e-21 104.0 85 50.6
Ca_20693_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 1.2e-20 103.6 82 50.0
Ca_30106_v3 Cicer arietinum L. HOM05D001969 ORTHO05D009003 1.2e-20 103.6 82 50.0
Medtr4g046043 Medicago truncatula HOM05D001969 ORTHO05D009003 1.2e-20 103.6 82 51.2
Lj3g0006045 Lotus japonicus HOM05D001969 ORTHO05D009003 1.5e-20 103.2 89 50.6
AL3G54010 Arabidopsis lyrata HOM05D001969 ORTHO05D009003 2.0e-20 102.8 103 44.7
Medtr4g065010 Medicago truncatula HOM05D001969 ORTHO05D009003 2.0e-20 102.8 77 53.2
Os07g0530300 Oryza sativa ssp. japonica HOM05D001969 ORTHO05D009003 2.0e-20 102.8 85 50.6
Psat7g197120 Pisum sativum HOM05D001969 ORTHO05D009003 2.0e-20 102.8 82 50.0
TPR.G21647 Trifolium pratense HOM05D001969 ORTHO05D009003 2.0e-20 102.8 82 48.8
Sc03g0002190 Simmondsia chinensis HOM05D001969 ORTHO05D009003 2.6e-20 102.4 88 53.4
Gorai.005G205100 Gossypium raimondii HOM05D001969 ORTHO05D003463 4.4e-20 101.7 70 60.0
HPP92_010084 Vanilla planifolia HOM05D001969 ORTHO05D009003 7.5e-20 100.9 87 50.6
HPP92_010093 Vanilla planifolia HOM05D001969 ORTHO05D009003 7.5e-20 100.9 87 50.6
PSO384G2148 Papaver somniferum HOM05D001969 ORTHO05D009003 4.9e-19 98.2 88 50.0
Lj2g0006312 Lotus japonicus HOM05D001969 ORTHO05D009003 6.4e-19 97.8 88 50.0
PSO339G1404 Papaver somniferum HOM05D001969 ORTHO05D009003 2.4e-18 95.9 88 48.9
SMO351G0323 Selaginella moellendorffii HOM05D001969 ORTHO05D009003 9.2e-18 94.0 86 45.3
Mapoly0071s0092 Marchantia polymorpha HOM05D001969 ORTHO05D009003 1.6e-17 93.2 81 45.7
PSO675G3991 Papaver somniferum HOM05D001969 ORTHO05D009003 4.6e-17 91.7 113 43.4
Pp3c6_17280 Physcomitrium patens HOM05D001969 ORTHO05D009003 5.0e-16 88.2 78 43.6
A09p58710 Brassica napus HOM05D001969 ORTHO05D003463 2.5e-15 85.9 97 39.2
BraA09t41257Z Brassica rapa HOM05D001969 ORTHO05D003463 2.5e-15 85.9 97 39.2
Zm00001eb414510 Zea mays HOM05D001969 ORTHO05D009003 9.5e-15 84.0 65 55.4
BcaB08g34941 Brassica carinata HOM05D001969 ORTHO05D003463 1.2e-14 83.6 97 39.2
Thhalv10001991m.g Eutrema salsugineum HOM05D001969 ORTHO05D003463 2.1e-14 82.8 98 38.8
BcaC07g41194 Brassica carinata HOM05D001969 ORTHO05D003463 3.6e-14 82.0 97 37.1
C08p42010 Brassica napus HOM05D001969 ORTHO05D003463 3.6e-14 82.0 97 37.1
BolC8t51763H Brassica oleracea HOM05D001969 ORTHO05D003463 3.6e-14 82.0 97 37.1
Aa31LG8G17650 Aethionema arabicum HOM05D001969 ORTHO05D003463 1.4e-13 80.1 80 41.2
PSO017G7338 Papaver somniferum HOM05D001969 ORTHO05D009003 2.3e-13 79.3 79 43.0
FAN02G3777 Fragaria x ananassa HOM05D001969 ORTHO05D009003 4.0e-13 78.6 46 69.6
Eucgr.K00932 Eucalyptus grandis HOM05D001969 ORTHO05D009003 3.4e-12 75.5 61 54.1
Cpa.g.sc17.168 Carica papaya HOM05D001969 ORTHO05D003463 5.8e-12 74.7 74 44.6
Rhsim04G0065900 Rhododendron simsii HOM05D001969 ORTHO05D003463 5.8e-12 74.7 55 60.0
Hma1.2p1_0832F.1_g225700 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 6.4e-11 71.2 89 42.7
Ah.07g207260 Amaranthus hybridus HOM05D001969 ORTHO05D003463 1.1e-10 70.5 66 43.9
Hma1.2p1_0384F.1_g141150 Hydrangea macrophylla HOM05D001969 ORTHO05D009003 9.2e-10 67.4 60 51.7
MCO02G305 Micromonas commoda HOM05D001969 ORTHO05D009003 1.3e-08 63.5 73 39.7
SGA_v2.0_scaffold130G34329 Striga asiatica HOM05D001969 ORTHO05D009003 9.5e-07 57.4 73 43.8
FAN02G4205 Fragaria x ananassa HOM05D001969 ORTHO05D003463 2.1e-06 56.2 31 74.2
Cre02.g075550 Chlamydomonas reinhardtii HOM05D001969 ORTHO05D009003 2.8e-06 55.8 77 33.8


User provided reference genes

Program Settings