Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012859 Sechium edule HOM05D007428 ORTHO05D009308 5.5e-47 190.7 99 100.0
ClCG01G002350 Citrullus lanatus HOM05D007428 ORTHO05D009308 4.0e-45 184.5 99 91.9
MELO3C005713.2 Cucumis melo HOM05D007428 ORTHO05D009308 4.0e-45 184.5 99 91.9
CsaV3_5G002410 Cucumis sativus L. HOM05D007428 ORTHO05D009308 4.0e-45 184.5 99 91.9
Duzib084G1020 Durio zibethinus HOM05D007428 ORTHO05D009308 2.2e-35 152.1 94 79.8
Duzib205G1701 Durio zibethinus HOM05D007428 ORTHO05D009308 1.2e-33 146.4 93 77.4
Prupe.5G106400 Prunus persica HOM05D007428 ORTHO05D009308 2.7e-33 145.2 97 72.2
GSVIVG01019416001 Vitis vinifera HOM05D007428 ORTHO05D009308 2.7e-33 145.2 95 73.7
Atru.chr9.2117 Acer truncatum HOM05D007428 ORTHO05D009308 3.5e-33 144.8 95 75.8
TAR374G0673 Trochodendron aralioides HOM05D007428 ORTHO05D009308 5.9e-33 144.1 99 70.7
Gohir.D03G078400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 1.3e-32 142.9 93 75.3
Gorai.003G085700 Gossypium raimondii HOM05D007428 ORTHO05D009308 1.3e-32 142.9 93 75.3
Gohir.A08G114300 Gossypium hirsutum HOM05D007428 ORTHO05D009308 1.7e-32 142.5 94 74.5
AUR62000169 Chenopodium quinoa HOM05D007428 ORTHO05D009308 2.3e-32 142.1 96 71.9
Gohir.D08G134500 Gossypium hirsutum HOM05D001458 ORTHO05D008462 2.3e-32 142.1 94 74.5
Manes.02G017900 Manihot esculenta HOM05D007428 ORTHO05D009308 2.3e-32 142.1 94 73.4
Potri.001G099200 Populus trichocarpa HOM05D007428 ORTHO05D009308 2.9e-32 141.7 94 73.4
AUR62039842 Chenopodium quinoa HOM05D007428 ORTHO05D009308 5.0e-32 141.0 96 70.8
CiPaw.11G129900 Carya illinoinensis HOM05D007428 ORTHO05D009308 6.6e-32 140.6 93 76.3
Ciclev10023047m.g Citrus clementina HOM05D007428 ORTHO05D009308 1.1e-31 139.8 95 72.6
Phvul.001G130100 Phaseolus vulgaris HOM05D007428 ORTHO05D009308 2.5e-31 138.7 93 72.0
Cfa012244 Carpinus fangiana HOM05D007428 ORTHO05D009308 7.3e-31 137.1 94 73.4
THA.LOC104809367 Tarenaya hassleriana HOM05D007428 ORTHO05D009308 7.3e-31 137.1 97 68.0
BcaB06g27627 Brassica carinata HOM05D007428 ORTHO05D009308 9.5e-31 136.7 94 69.1
EL10Ac4g10178 Beta vulgaris HOM05D007428 ORTHO05D009308 1.2e-30 136.3 97 68.0
Nn1g01671 Nelumbo nucifera HOM05D007428 ORTHO05D009308 1.6e-30 136.0 99 66.7
Thhalv10028001m.g Eutrema salsugineum HOM05D007428 ORTHO05D009308 2.8e-30 135.2 94 69.1
Actinidia10608 Actinidia chinensis HOM05D007428 ORTHO05D009308 3.6e-30 134.8 94 68.1
Eucgr.D01813 Eucalyptus grandis HOM05D007428 ORTHO05D009308 3.6e-30 134.8 92 70.7
TAR375G0610 Trochodendron aralioides HOM05D007428 ORTHO05D009308 3.6e-30 134.8 97 66.0
BcaC02g08952 Brassica carinata HOM05D007428 ORTHO05D009308 4.7e-30 134.4 95 67.4
C04p48540 Brassica napus HOM05D007428 ORTHO05D009308 4.7e-30 134.4 95 67.4
BolC4t26447H Brassica oleracea HOM05D007428 ORTHO05D009308 4.7e-30 134.4 95 67.4
CARHR287610 Cardamine hirsuta HOM05D007428 ORTHO05D009308 4.7e-30 134.4 97 67.0
A04p14670 Brassica napus HOM05D007428 ORTHO05D009308 6.1e-30 134.0 94 68.1
BraA04t17107Z Brassica rapa HOM05D007428 ORTHO05D009308 6.1e-30 134.0 94 68.1
PGR031G0112 Punica granatum HOM05D007428 ORTHO05D009308 6.1e-30 134.0 96 69.8
Sp7g00480 Schrenkiella parvula HOM05D007428 ORTHO05D009308 1.0e-29 133.3 97 66.0
TPR.G18241 Trifolium pratense HOM05D007428 ORTHO05D009308 1.0e-29 133.3 93 69.9
Lalb_Chr25g0287261 Lupinus albus HOM05D007428 ORTHO05D009308 1.4e-29 132.9 93 69.9
MBI11_g02029_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 1.8e-29 132.5 99 66.7
Carub.0007s3391 Capsella rubella HOM05D007428 ORTHO05D009308 2.3e-29 132.1 97 66.0
FAN04G2816 Fragaria x ananassa HOM05D007428 ORTHO05D009308 3.0e-29 131.7 98 66.3
FAN13G2357 Fragaria x ananassa HOM05D007428 ORTHO05D009308 3.0e-29 131.7 98 66.3
FAN18G4254 Fragaria x ananassa HOM05D007428 ORTHO05D009308 3.0e-29 131.7 98 66.3
MD06G1090900 Malus domestica HOM05D007428 ORTHO05D009308 3.0e-29 131.7 99 66.7
CSS0042206 Camellia sinensis var. sinensis HOM05D007428 ORTHO05D009308 4.0e-29 131.3 96 66.7
Sabra01G0074400 Salix brachista HOM05D007428 ORTHO05D009308 4.0e-29 131.3 94 70.2
Dinv38899 Davidia involucrata HOM05D007428 ORTHO05D009308 8.9e-29 130.2 96 66.7
AT5G41560 Arabidopsis thaliana HOM05D007428 ORTHO05D009308 1.2e-28 129.8 97 64.9
DCAR_005573 Daucus carota HOM05D007428 ORTHO05D009308 1.2e-28 129.8 92 68.5
Aa31LG9G500 Aethionema arabicum HOM05D007428 ORTHO05D009308 2.0e-28 129.0 98 65.3
Medtr7g091260 Medicago truncatula HOM05D007428 ORTHO05D009308 2.0e-28 129.0 93 67.7
Peaxi162Scf00102g01635 Petunia axillaris HOM05D007428 ORTHO05D009308 2.0e-28 129.0 93 67.7
AL7G47840 Arabidopsis lyrata HOM05D007428 ORTHO05D009308 2.6e-28 128.6 97 63.9
Glyma.19G137300 Glycine max HOM05D007428 ORTHO05D009308 3.4e-28 128.3 93 66.7
RcHm_v2.0_Chr7g0196601 Rosa chinensis HOM05D007428 ORTHO05D009308 4.4e-28 127.9 98 64.3
CiPaw.12G089300 Carya illinoinensis HOM05D007428 ORTHO05D009308 7.5e-28 127.1 95 67.4
Duzib068G1017 Durio zibethinus HOM05D007428 ORTHO05D009308 7.5e-28 127.1 72 83.3
ATR0661G028 Amborella trichopoda HOM05D007428 ORTHO05D009308 9.8e-28 126.7 97 64.9
SGA_v2.0_scaffold111G31471 Striga asiatica HOM05D007428 ORTHO05D009308 3.7e-27 124.8 99 62.6
HPP92_001758 Vanilla planifolia HOM05D007428 ORTHO05D009308 3.7e-27 124.8 100 62.0
Gorai.004G137700 Gossypium raimondii HOM05D007428 ORTHO05D009308 4.9e-27 124.4 69 84.1
CANSAT21G2180 Cannabis sativa HOM05D007428 ORTHO05D009308 6.4e-27 124.0 101 65.3
Glyma.03G134700 Glycine max HOM05D007428 ORTHO05D009308 6.4e-27 124.0 102 64.7
QL12p031804 Quercus lobata HOM05D007428 ORTHO05D009308 6.4e-27 124.0 135 51.1
PGSC0003DMG400005826 Solanum tuberosum HOM05D007428 ORTHO05D009308 1.8e-26 122.5 92 65.2
Cc08_g15240 Coffea canephora HOM05D007428 ORTHO05D009308 5.4e-26 120.9 96 61.5
Solyc08g008120.4 Solanum lycopersicum HOM05D007428 ORTHO05D009308 7.0e-26 120.6 92 64.1
Sopen08g003980 Solanum pennellii HOM05D007428 ORTHO05D009308 7.0e-26 120.6 92 64.1
CDE04G2716 Ceratophyllum demersum HOM05D007428 ORTHO05D009308 9.2e-26 120.2 99 61.6
Lj1g0002351 Lotus japonicus HOM05D007428 ORTHO05D009308 1.6e-25 119.4 93 62.4
Aqoxy7G00179 Aquilegia oxysepala HOM05D007428 ORTHO05D009308 7.8e-25 117.1 99 58.6
ECA246G0502 Erigeron canadensis HOM05D007428 ORTHO05D009308 7.8e-25 117.1 89 65.2
FAN08G3453 Fragaria x ananassa HOM05D005196 ORTHO05D006107 1.7e-24 115.9 79 68.4
Lsat_1_v5_gn_3_8800 Lactuca sativa HOM05D007428 ORTHO05D009308 3.0e-24 115.2 91 61.5
SalBow8G4511 Salvia bowleyana HOM05D005196 ORTHO05D006107 3.9e-24 114.8 98 59.2
Rhsim02G0235600 Rhododendron simsii HOM05D007428 ORTHO05D009308 5.0e-24 114.4 144 45.1
arahy.Tifrunner.gnm1.ann1.I9CJRL Arachis hypogaea HOM05D007428 ORTHO05D009308 1.5e-23 112.8 90 63.3
SEGI_01808 Sequoiadendron giganteum HOM05D007428 ORTHO05D009308 1.9e-23 112.5 78 64.1
SMO117G0109 Selaginella moellendorffii HOM05D007428 ORTHO05D009308 9.5e-23 110.2 93 58.1
PSO782G0783 Papaver somniferum HOM05D007428 ORTHO05D009308 1.6e-22 109.4 100 58.0
arahy.Tifrunner.gnm1.ann1.LGCW4P Arachis hypogaea HOM05D007428 ORTHO05D009308 4.7e-22 107.8 104 56.7
Nn6g32110 Nelumbo nucifera HOM05D007428 ORTHO05D009308 1.1e-21 106.7 82 65.9
PSO478G2995 Papaver somniferum HOM05D007428 ORTHO05D009308 3.1e-21 105.1 100 57.0
Hma1.2p1_0216F.1_g091060 Hydrangea macrophylla HOM05D007428 ORTHO05D009308 1.5e-20 102.8 95 55.8
Nitab4.5_0007906g0040 Nicotiana tabacum HOM05D007428 ORTHO05D009308 6.4e-19 97.4 94 56.4
Thecc.03G286400 Theobroma cacao HOM05D007428 ORTHO05D009308 6.4e-19 97.4 49 89.8
Zm00001eb001890 Zea mays HOM05D007428 ORTHO05D009308 6.4e-19 97.4 92 59.8
Ah.06g194380 Amaranthus hybridus HOM05D007428 ORTHO05D009308 8.3e-19 97.1 167 38.9
Hund14271 Selenicereus undatus HOM05D007428 ORTHO05D009308 1.4e-18 96.3 50 84.0
Zm00001eb403670 Zea mays HOM05D007428 ORTHO05D009308 4.1e-18 94.7 94 58.5
Gohir.A02G105400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 5.4e-18 94.4 54 77.8
Os03g0125700 Oryza sativa ssp. japonica HOM05D007428 ORTHO05D009308 9.2e-18 93.6 91 56.0
MD14G1111700 Malus domestica HOM05D007428 ORTHO05D009308 1.6e-17 92.8 69 65.2
Sc01g0009840 Simmondsia chinensis HOM05D007428 ORTHO05D009308 3.9e-16 88.2 76 56.6
COL.COLO4_08363 Corchorus olitorius HOM05D007428 ORTHO05D009308 5.0e-16 87.8 64 70.3
HPP92_003464 Vanilla planifolia HOM05D007428 ORTHO05D009308 9.5e-15 83.6 66 60.6
Cfa012240 Carpinus fangiana HOM05D007428 ORTHO05D009308 1.2e-14 83.2 65 66.2
FvH4_5g03180 Fragaria vesca HOM05D007428 ORTHO05D009308 6.2e-14 80.9 69 60.9
MBI17_g11952_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 1.4e-13 79.7 51 64.7
DCAR_008355 Daucus carota HOM05D001458 ORTHO05D008462 4.0e-13 78.2 106 44.3
Haze_08759 Corylus avellana HOM05D007428 ORTHO05D009308 3.6e-06 55.1 28 85.7


User provided reference genes

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