Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012820 Sechium edule HOM05D001200 ORTHO05D009713 9.2e-25 116.3 69 100.0
Oeu043656.1 Olea europaea HOM05D001200 ORTHO05D009713 3.1e-20 101.3 82 80.5
ATCG01060 Arabidopsis thaliana HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
BolSC29t60505H Brassica oleracea HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
BolSC35t60703H Brassica oleracea HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
BolSC37t60792H Brassica oleracea HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
BolSC45t60910H Brassica oleracea HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 79.3
BolSC46t60959H Brassica oleracea HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
BolSC49t61142H Brassica oleracea HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
BraSC103t45428Z Brassica rapa HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
BraSC143t45661Z Brassica rapa HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
BraSC179t45775Z Brassica rapa HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
BraSC59t46550Z Brassica rapa HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
CAN.G1526.3 Capsicum annuum HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
CAN.G1526.8 Capsicum annuum HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
CAN.G278.4 Capsicum annuum HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
Migut.D01253 Erythranthe guttata HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
Gohir.1Z049631 Gossypium hirsutum HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
Gohir.A02G134400 Gossypium hirsutum HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
Gohir.A09G046200 Gossypium hirsutum HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
Hma1.2p1_0382F.1_g140210 Hydrangea macrophylla HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
Nn064s42211 Nelumbo nucifera HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
PSO548G0036 Papaver somniferum HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
PGR111G0008 Punica granatum HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
RcHm_v2.0_Chr5g0017221 Rosa chinensis HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
RcHm_v2.0_Chr5g0043041 Rosa chinensis HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
RcHm_v2.0_CPg0502781 Rosa chinensis HOM05D001200 ORTHO05D009713 4.0e-20 100.9 82 81.7
Nn1g00557 Nelumbo nucifera HOM05D001200 ORTHO05D009713 5.2e-20 100.5 82 80.5
HanXRQChr00c0336g0573651 Helianthus annuus HOM05D001200 ORTHO05D009713 6.9e-20 100.1 82 80.5
HanXRQChr09g0246671 Helianthus annuus HOM05D001200 ORTHO05D009713 6.9e-20 100.1 82 80.5
Lsat_1_v5_gn_1_14180 Lactuca sativa HOM05D001200 ORTHO05D009713 6.9e-20 100.1 82 80.5
C04p22670 Brassica napus HOM05D001200 ORTHO05D009713 8.9e-20 99.8 82 80.5
EL10As15g24099 Beta vulgaris HOM05D001200 ORTHO05D009778 1.2e-19 99.4 82 80.5
Nitab4.5_0001313g0070 Nicotiana tabacum HOM05D001200 ORTHO05D009778 1.2e-19 99.4 82 80.5
BolC9t56926H Brassica oleracea HOM05D001200 ORTHO05D009713 1.5e-19 99.0 82 79.3
Gohir.D06G133600 Gossypium hirsutum HOM05D001200 ORTHO05D009713 1.5e-19 99.0 82 78.0
Nn3g20217 Nelumbo nucifera HOM05D001200 ORTHO05D009713 1.5e-19 99.0 82 79.3
CAN.G965.7 Capsicum annuum HOM05D001200 ORTHO05D009713 2.0e-19 98.6 82 80.5
HanXRQChr02g0038661 Helianthus annuus HOM05D001200 ORTHO05D009713 7.6e-19 96.7 82 76.8
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 9.9e-19 96.3 79 81.0
DCAR_032537 Daucus carota HOM05D001200 ORTHO05D009713 2.9e-18 94.7 82 78.0
Sed0023939 Sechium edule HOM05D001200 ORTHO05D009713 2.9e-18 94.7 82 62.2
CARHR282430 Cardamine hirsuta HOM05D001200 ORTHO05D009713 4.9e-18 94.0 82 79.3
Gorai.009G377500 Gossypium raimondii HOM05D001200 ORTHO05D009713 4.9e-18 94.0 82 76.8
Glyma.18G155300 Glycine max HOM05D001200 ORTHO05D009713 8.4e-18 93.2 82 58.5
HanXRQChr17g0557761 Helianthus annuus HOM05D001200 ORTHO05D002731 1.1e-17 92.8 78 79.5
HanXRQChr09g0244731 Helianthus annuus HOM05D001200 ORTHO05D009713 1.9e-17 92.0 77 79.2
Lalb_Chr07g0191761 Lupinus albus HOM05D001200 ORTHO05D002731 1.9e-17 92.0 77 80.5
C09p40340 Brassica napus HOM05D001200 ORTHO05D009713 2.4e-17 91.7 80 73.8
arahy.Tifrunner.gnm1.ann1.USFH3V Arachis hypogaea HOM05D001200 ORTHO05D009713 3.2e-17 91.3 81 75.3
Medtr4g050960 Medicago truncatula HOM05D001200 ORTHO05D009713 7.1e-17 90.1 82 78.0
HanXRQChr00c0504g0575301 Helianthus annuus HOM05D001200 ORTHO05D009713 4.6e-16 87.4 77 77.9
Cpa.g.sc63.22 Carica papaya HOM05D001200 ORTHO05D009713 1.0e-15 86.3 82 76.8
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 6.6e-15 83.6 81 74.1
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 6.6e-15 83.6 81 74.1
Hund27630 Selenicereus undatus HOM05D001200 ORTHO05D009713 8.7e-15 83.2 81 72.8
Hund28597 Selenicereus undatus HOM05D001200 ORTHO05D009713 8.7e-15 83.2 81 72.8
Gohir.A09G017925 Gossypium hirsutum HOM05D001200 ORTHO05D009713 5.6e-14 80.5 72 76.4
Nn1g08635 Nelumbo nucifera HOM05D001200 ORTHO05D009713 7.3e-14 80.1 78 70.5
Os09g0485201 Oryza sativa ssp. japonica HOM05D001200 ORTHO05D009713 7.3e-14 80.1 82 67.1
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 1.3e-13 79.3 74 75.7
Hund30643 Selenicereus undatus HOM05D001200 ORTHO05D009713 1.3e-13 79.3 75 76.0
Hund27883 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.6e-13 79.0 76 75.0
Hund28330 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.6e-13 79.0 76 75.0
Hund28851 Selenicereus undatus HOM05D001200 ORTHO05D009713 1.6e-13 79.0 76 75.0
Hund29433 Selenicereus undatus HOM05D001200 ORTHO05D009713 1.6e-13 79.0 76 75.0
Hund30513 Selenicereus undatus HOM05D001200 ORTHO05D002731 1.6e-13 79.0 76 75.0
Potri.019G014344 Populus trichocarpa HOM05D001200 ORTHO05D009713 2.1e-13 78.6 82 51.2
BraSC25t45909Z Brassica rapa HOM05D001200 ORTHO05D009713 8.1e-13 76.6 71 74.6
HanXRQChr02g0038701 Helianthus annuus HOM05D001200 ORTHO05D009713 1.1e-12 76.3 33 97.0
BolC2t10595H Brassica oleracea HOM05D001200 ORTHO05D009713 1.4e-12 75.9 33 97.0
BolSC29t60545H Brassica oleracea HOM05D001200 ORTHO05D009713 1.4e-12 75.9 33 97.0
BolSC35t60693H Brassica oleracea HOM05D001200 ORTHO05D009713 1.4e-12 75.9 33 97.0
BolSC44t60821H Brassica oleracea HOM05D001200 ORTHO05D009713 1.4e-12 75.9 33 97.0
Gohir.A05G291020 Gossypium hirsutum HOM05D001163 ORTHO05D001769 1.4e-12 75.9 33 97.0
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-12 75.9 33 97.0
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-12 75.9 33 97.0
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-12 75.9 33 97.0
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-12 75.9 33 97.0
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-12 75.9 33 97.0
HanXRQChr17g0569731 Helianthus annuus HOM05D001200 ORTHO05D009778 1.4e-12 75.9 33 97.0
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 1.4e-12 75.9 33 97.0
Sed0013644 Sechium edule HOM05D000533 ORTHO05D006151 1.4e-12 75.9 69 76.8
Sed0016654 Sechium edule HOM05D000533 ORTHO05D006151 1.4e-12 75.9 69 76.8
Sed0021575 Sechium edule HOM05D000533 ORTHO05D006151 1.4e-12 75.9 69 76.8
GSVIVG01034636001 Vitis vinifera HOM05D001200 ORTHO05D009713 1.4e-12 75.9 33 97.0
TPR.G17259 Trifolium pratense HOM05D000404 ORTHO05D009713 4.0e-12 74.3 33 93.9
arahy.Tifrunner.gnm1.ann1.WH1VZM Arachis hypogaea HOM05D001200 ORTHO05D009713 6.9e-12 73.6 77 51.9
Nitab4.5_0007979g0060 Nicotiana tabacum HOM05D001200 ORTHO05D009778 9.0e-12 73.2 69 56.5
HanXRQChr13g0388461 Helianthus annuus HOM05D001200 ORTHO05D009713 1.3e-10 69.3 33 90.9
HanXRQChr03g0073101 Helianthus annuus HOM05D001200 ORTHO05D002731 1.7e-10 68.9 33 90.9
CsaV3_UNG210150 Cucumis sativus L. HOM05D001200 ORTHO05D009713 3.8e-10 67.8 69 69.6
HanXRQChr08g0211961 Helianthus annuus HOM05D001200 ORTHO05D002731 4.9e-10 67.4 29 93.1
SMO086G0058 Selaginella moellendorffii HOM05D001200 ORTHO05D009713 1.9e-09 65.5 81 45.7
C07p33440 Brassica napus HOM05D001200 ORTHO05D009713 1.2e-08 62.8 93 41.9
C09p24630 Brassica napus HOM05D001200 ORTHO05D009713 1.2e-08 62.8 93 41.9
C09p40200 Brassica napus HOM05D001200 ORTHO05D009713 1.2e-08 62.8 93 41.9
Hund24329 Selenicereus undatus HOM05D001200 ORTHO05D009713 2.7e-08 61.6 33 75.8
C09p40360 Brassica napus HOM05D001200 ORTHO05D009713 3.5e-08 61.2 82 47.6
BolC9t56924H Brassica oleracea HOM05D001200 ORTHO05D009713 3.5e-08 61.2 82 47.6
MELO3C027236.2 Cucumis melo HOM05D001200 ORTHO05D009713 1.5e-06 55.8 61 47.5
AL9U11952 Arabidopsis lyrata HOM05D001200 ORTHO05D009713 1.9e-06 55.5 60 46.7
BolC9t56806H Brassica oleracea HOM05D001200 ORTHO05D009713 2.5e-06 55.1 61 45.9
Gorai.004G082100 Gossypium raimondii HOM05D001200 ORTHO05D009713 4.3e-06 54.3 61 45.9
Gohir.D08G077250 Gossypium hirsutum HOM05D001200 ORTHO05D009713 5.6e-06 53.9 59 47.5


User provided reference genes

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