Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 1.2e-74 283.1 144 100.0
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 1.7e-68 262.7 144 93.8
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 1.4e-67 259.6 144 91.7
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 1.3e-65 253.1 142 89.4
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 2.9e-65 251.9 142 89.4
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 5.5e-64 247.7 142 86.6
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 2.1e-63 245.7 142 87.3
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 4.7e-63 244.6 142 86.6
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 1.8e-62 242.7 142 85.2
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 1.8e-62 242.7 142 85.2
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 1.8e-62 242.7 143 87.4
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 5.2e-62 241.1 142 87.3
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 5.2e-62 241.1 142 85.9
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 6.8e-62 240.7 142 85.9
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 8.9e-62 240.4 142 85.9
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.2e-61 240.0 143 86.0
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.5e-61 239.6 143 86.0
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 1.5e-61 239.6 142 84.5
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 1.5e-61 239.6 142 86.6
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 1.5e-61 239.6 142 87.3
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 2.0e-61 239.2 143 85.3
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 2.0e-61 239.2 142 86.6
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 2.6e-61 238.8 132 92.4
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 3.4e-61 238.4 132 93.2
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 4.4e-61 238.0 144 86.8
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 4.4e-61 238.0 140 85.0
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 5.7e-61 237.7 143 85.3
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 5.7e-61 237.7 143 85.3
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 7.5e-61 237.3 142 85.2
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 9.8e-61 236.9 142 86.6
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 1.3e-60 236.5 143 84.6
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.7e-60 236.1 142 85.9
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 2.2e-60 235.7 142 85.9
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 2.2e-60 235.7 142 85.9
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 2.8e-60 235.3 155 79.4
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 2.8e-60 235.3 141 84.4
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 3.7e-60 235.0 142 85.9
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 4.9e-60 234.6 142 84.5
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 6.3e-60 234.2 144 84.7
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 8.3e-60 233.8 203 67.0
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 8.3e-60 233.8 142 83.1
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 8.3e-60 233.8 143 84.6
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 1.1e-59 233.4 143 83.9
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 1.1e-59 233.4 142 83.1
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 1.4e-59 233.0 142 83.1
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 1.8e-59 232.6 144 84.0
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 1.8e-59 232.6 142 83.8
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 7.0e-59 230.7 143 82.5
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 3.5e-58 228.4 143 81.8
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 3.5e-58 228.4 143 81.8
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 3.5e-58 228.4 143 82.5
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 3.5e-58 228.4 141 82.3
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 5.9e-58 227.6 143 83.2
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 1.0e-57 226.9 143 81.8
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 1.3e-57 226.5 143 81.1
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 2.3e-57 225.7 143 81.1
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 2.3e-57 225.7 143 82.5
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 2.9e-57 225.3 143 83.2
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 2.9e-57 225.3 143 80.4
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 2.9e-57 225.3 142 81.0
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 2.9e-57 225.3 142 81.7
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 3.8e-57 224.9 143 80.4
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 3.8e-57 224.9 132 85.6
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 5.0e-57 224.6 143 81.1
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 5.0e-57 224.6 143 80.4
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 5.0e-57 224.6 143 80.4
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 6.6e-57 224.2 143 80.4
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 1.1e-56 223.4 143 80.4
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 1.1e-56 223.4 143 79.7
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 1.1e-56 223.4 130 84.6
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 1.1e-56 223.4 142 81.0
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 1.1e-56 223.4 146 81.5
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 1.5e-56 223.0 144 80.6
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 2.5e-56 222.2 130 86.2
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 3.3e-56 221.9 143 79.7
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 5.6e-56 221.1 144 83.3
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 5.6e-56 221.1 143 80.4
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 9.5e-56 220.3 143 79.0
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 1.2e-55 219.9 143 80.4
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 1.2e-55 219.9 143 79.7
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 1.2e-55 219.9 144 80.6
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 1.2e-55 219.9 143 79.0
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 1.6e-55 219.5 143 79.7
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 1.6e-55 219.5 143 79.7
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 1.6e-55 219.5 143 79.7
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 1.6e-55 219.5 143 79.7
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 1.6e-55 219.5 143 79.7
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 3.6e-55 218.4 143 80.4
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 4.7e-55 218.0 146 81.5
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 4.7e-55 218.0 146 81.5
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 6.1e-55 217.6 144 81.2
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 1.0e-54 216.9 143 79.7
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 1.0e-54 216.9 146 81.5
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 1.8e-54 216.1 143 77.6
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 3.0e-54 215.3 143 79.7
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 4.0e-54 214.9 145 80.7
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 4.0e-54 214.9 144 82.6
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 4.0e-54 214.9 143 82.5
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 5.2e-54 214.5 143 79.7
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 5.2e-54 214.5 142 80.3
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 8.9e-54 213.8 143 80.4
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 2.6e-53 212.2 143 77.6
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 3.4e-53 211.8 142 78.9
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 4.4e-53 211.5 121 86.0
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 5.8e-53 211.1 142 78.2
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 7.5e-53 210.7 142 78.2
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 1.3e-52 209.9 144 77.8
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 1.3e-52 209.9 144 77.8
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 1.3e-52 209.9 144 77.8
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 1.7e-52 209.5 147 78.2
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 2.2e-52 209.1 144 78.5
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 2.9e-52 208.8 142 79.6
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 3.7e-52 208.4 142 76.8
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 6.4e-52 207.6 143 79.0
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 1.4e-51 206.5 143 77.6
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 4.1e-51 204.9 142 78.9
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 9.2e-51 203.8 128 81.2
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 2.7e-50 202.2 152 75.0
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 6.0e-50 201.1 133 80.5
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 1.3e-49 199.9 142 77.5
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 1.3e-49 199.9 142 77.5
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 1.3e-49 199.9 142 77.5
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 1.7e-49 199.5 143 75.5
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.7e-49 199.5 143 75.5
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 1.7e-49 199.5 131 79.4
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 6.6e-49 197.6 141 77.3
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 2.5e-48 195.7 148 74.3
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 4.3e-48 194.9 141 75.9
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 4.3e-48 194.9 143 74.1
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 5.6e-48 194.5 180 64.4
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 2.1e-47 192.6 142 75.4
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 3.6e-47 191.8 167 67.7
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 1.4e-46 189.9 145 72.4
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 3.1e-46 188.7 146 71.2
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 8.9e-46 187.2 120 81.7
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 4.4e-45 184.9 145 73.1
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 1.3e-44 183.3 141 73.8
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 2.9e-44 182.2 131 74.8
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 4.9e-44 181.4 91 96.7
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 8.3e-44 180.6 142 72.5
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 7.0e-43 177.6 130 73.1
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 3.5e-42 175.3 115 80.0
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 6.0e-42 174.5 121 77.7
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 7.8e-42 174.1 144 68.8
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 5.0e-41 171.4 148 70.3
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 8.6e-41 170.6 143 69.9
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 8.6e-41 170.6 93 88.2
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 1.5e-40 169.9 145 66.9
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 1.9e-40 169.5 137 73.7
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 2.5e-40 169.1 130 73.8
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 3.3e-40 168.7 121 79.3
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 4.3e-40 168.3 125 77.6
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 5.6e-40 167.9 138 70.3
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 6.8e-38 161.0 89 88.8
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 1.2e-37 160.2 143 65.0
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 5.8e-37 157.9 112 78.6
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 5.8e-37 157.9 144 64.6
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 7.5e-37 157.5 130 65.4
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 5.4e-35 151.4 98 81.6
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 6.0e-34 147.9 122 72.1
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 6.6e-33 144.4 111 69.4
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 9.5e-32 140.6 82 80.5
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 2.4e-30 136.0 103 73.8
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 4.4e-29 131.7 123 60.2
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 3.8e-28 128.6 133 57.1
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 3.8e-28 128.6 120 65.0
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 3.8e-28 128.6 120 65.0
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 9.2e-27 124.0 105 73.3
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 6.0e-26 121.3 69 82.6
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 7.8e-26 120.9 99 72.7
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.7e-25 119.8 145 54.5
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.5e-24 116.7 62 88.7
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 2.1e-23 112.8 132 52.3
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 2.1e-23 112.8 132 54.5
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 4.7e-23 111.7 80 73.8
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 5.2e-22 108.2 76 73.7
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 5.2e-22 108.2 77 72.7
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 6.4e-20 101.3 101 57.4
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 2.7e-18 95.9 81 67.9
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 2.3e-17 92.8 45 91.1
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 5.3e-14 81.6 76 65.8
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 2.3e-09 66.2 35 94.3


User provided reference genes

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