Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011436 Sechium edule HOM05D002376 ORTHO05D008821 1.3e-82 309.7 156 100.0
ClCG02G019170 Citrullus lanatus HOM05D002376 ORTHO05D008821 2.1e-69 265.8 156 87.2
MELO3C025682.2 Cucumis melo HOM05D002376 ORTHO05D008821 1.5e-67 259.6 156 85.3
CsaV3_6G019000 Cucumis sativus L. HOM05D002376 ORTHO05D008821 2.0e-67 259.2 156 85.9
Haze_24442 Corylus avellana HOM05D002376 ORTHO05D008821 9.9e-51 203.8 145 69.7
Cfa010938 Carpinus fangiana HOM05D002376 ORTHO05D008821 1.3e-50 203.4 145 69.7
CiPaw.13G066200 Carya illinoinensis HOM05D002376 ORTHO05D008821 1.3e-50 203.4 146 69.9
Manes.18G140300 Manihot esculenta HOM05D002376 ORTHO05D008821 3.8e-50 201.8 145 69.0
COL.COLO4_11184 Corchorus olitorius HOM05D002376 ORTHO05D008821 5.5e-49 198.0 144 70.1
QL03p067094 Quercus lobata HOM05D002376 ORTHO05D008821 9.3e-49 197.2 150 67.3
Lj1A123G47 Lonicera japonica HOM05D002376 ORTHO05D008821 3.5e-48 195.3 131 72.5
GSVIVG01024598001 Vitis vinifera HOM05D002376 ORTHO05D008821 7.9e-48 194.1 142 67.6
CANSAT54G2364 Cannabis sativa HOM05D002376 ORTHO05D008821 5.1e-47 191.4 144 66.7
Thecc.09G361000 Theobroma cacao HOM05D002376 ORTHO05D008821 1.1e-46 190.3 144 68.1
Duzib168G1911 Durio zibethinus HOM05D002376 ORTHO05D008821 1.9e-46 189.5 146 67.1
TAR623G0666 Trochodendron aralioides HOM05D002376 ORTHO05D008821 2.5e-46 189.1 129 69.8
Gorai.003G151600 Gossypium raimondii HOM05D002376 ORTHO05D008821 3.3e-46 188.7 148 67.6
Dinv28710 Davidia involucrata HOM05D002376 ORTHO05D008821 4.3e-46 188.3 124 72.6
Ciclev10017044m.g Citrus clementina HOM05D002376 ORTHO05D008821 5.6e-46 188.0 154 61.7
vmacro02895 Vaccinium macrocarpon HOM05D002376 ORTHO05D008821 7.4e-46 187.6 124 72.6
Gohir.D03G144300 Gossypium hirsutum HOM05D002376 ORTHO05D008821 1.3e-45 186.8 148 66.9
TWI75G1859 Tripterygium wilfordii HOM05D002376 ORTHO05D008821 1.6e-45 186.4 122 72.1
Gohir.A03G024200 Gossypium hirsutum HOM05D002376 ORTHO05D008821 3.7e-45 185.3 148 66.9
MD11G1061300 Malus domestica HOM05D002376 ORTHO05D008821 4.8e-45 184.9 122 70.5
CSS0003249 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 6.2e-45 184.5 124 66.9
Eucgr.B04014 Eucalyptus grandis HOM05D002376 ORTHO05D008821 6.2e-45 184.5 152 64.5
Eucgr.B04017 Eucalyptus grandis HOM05D002376 ORTHO05D008821 6.2e-45 184.5 152 64.5
TAR287G0002 Trochodendron aralioides HOM05D002376 ORTHO05D008821 8.2e-45 184.1 134 66.4
Glyma.02G234100 Glycine max HOM05D002376 ORTHO05D008821 1.8e-44 183.0 135 66.7
RcHm_v2.0_Chr5g0072361 Rosa chinensis HOM05D002376 ORTHO05D008821 3.1e-44 182.2 122 68.0
CSS0028475 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 9.0e-44 180.6 155 60.6
Phvul.008G249600 Phaseolus vulgaris HOM05D002376 ORTHO05D008821 1.5e-43 179.9 129 69.0
Prupe.6G044100 Prunus persica HOM05D002376 ORTHO05D008821 1.5e-43 179.9 122 68.0
LjContig00141g0012114 Lotus japonicus HOM05D002376 ORTHO05D008821 3.4e-43 178.7 123 73.2
Rhsim13G0061900 Rhododendron simsii HOM05D002376 ORTHO05D008821 3.4e-43 178.7 138 65.9
Migut.H01101 Erythranthe guttata HOM05D002376 ORTHO05D008821 7.6e-43 177.6 126 67.5
HanXRQChr01g0012551 Helianthus annuus HOM05D002376 ORTHO05D008821 7.6e-43 177.6 149 59.7
THA.LOC104800780 Tarenaya hassleriana HOM05D002376 ORTHO05D008821 7.6e-43 177.6 142 61.3
Sabra13G0126300 Salix brachista HOM05D002376 ORTHO05D008821 1.3e-42 176.8 146 62.3
arahy.Tifrunner.gnm1.ann1.F02FPT Arachis hypogaea HOM05D002376 ORTHO05D008821 3.8e-42 175.3 156 59.0
Atru.chr6.2418 Acer truncatum HOM05D002376 ORTHO05D008821 4.9e-42 174.9 147 60.5
PGR102G2282 Punica granatum HOM05D002376 ORTHO05D008821 4.9e-42 174.9 150 60.0
Actinidia23182 Actinidia chinensis HOM05D002376 ORTHO05D008821 1.1e-41 173.7 115 73.9
Nitab4.5_0000755g0130 Nicotiana tabacum HOM05D002376 ORTHO05D008821 1.1e-41 173.7 123 70.7
Lsat_1_v5_gn_5_175460 Lactuca sativa HOM05D002376 ORTHO05D008821 1.4e-41 173.3 149 59.7
Cc01_g09100 Coffea canephora HOM05D002376 ORTHO05D008821 1.9e-41 172.9 126 65.9
Thhalv10017367m.g Eutrema salsugineum HOM05D002376 ORTHO05D008821 1.9e-41 172.9 155 56.8
Nitab4.5_0009324g0020 Nicotiana tabacum HOM05D002376 ORTHO05D008821 1.9e-41 172.9 123 70.7
Peaxi162Scf00003g00413 Petunia axillaris HOM05D002376 ORTHO05D008821 1.9e-41 172.9 130 66.2
DCAR_014464 Daucus carota HOM05D002376 ORTHO05D008821 3.2e-41 172.2 120 68.3
Lalb_Chr10g0103701 Lupinus albus HOM05D002376 ORTHO05D008821 3.2e-41 172.2 133 66.2
Lalb_Chr17g0345531 Lupinus albus HOM05D002376 ORTHO05D008821 4.2e-41 171.8 137 63.5
Aa31LG5G6370 Aethionema arabicum HOM05D002376 ORTHO05D008821 7.1e-41 171.0 154 57.8
BcaB01g04113 Brassica carinata HOM05D002376 ORTHO05D008821 7.1e-41 171.0 140 60.0
FvH4_3g40170 Fragaria vesca HOM05D002376 ORTHO05D008821 9.3e-41 170.6 146 56.2
SalBow2G2295 Salvia bowleyana HOM05D002376 ORTHO05D008821 9.3e-41 170.6 126 64.3
Sopen11g027160 Solanum pennellii HOM05D002376 ORTHO05D008821 9.3e-41 170.6 126 65.9
A03p16960 Brassica napus HOM05D002376 ORTHO05D004654 1.2e-40 170.2 141 58.9
CARHR123650 Cardamine hirsuta HOM05D002376 ORTHO05D008821 1.2e-40 170.2 155 55.5
PGSC0003DMG400026358 Solanum tuberosum HOM05D002376 ORTHO05D008821 1.2e-40 170.2 126 65.9
Carub.0004s1148 Capsella rubella HOM05D002376 ORTHO05D008821 1.6e-40 169.9 140 59.3
PSO170G0682 Papaver somniferum HOM05D002376 ORTHO05D008821 2.7e-40 169.1 124 63.7
Potri.013G156700 Populus trichocarpa HOM05D002376 ORTHO05D008821 2.7e-40 169.1 160 55.0
AUR62009722 Chenopodium quinoa HOM05D002376 ORTHO05D008821 4.6e-40 168.3 130 62.3
AUR62036225 Chenopodium quinoa HOM05D002376 ORTHO05D008821 4.6e-40 168.3 134 60.4
Solyc11g068450.2 Solanum lycopersicum HOM05D002376 ORTHO05D008821 4.6e-40 168.3 126 65.1
C03p19980 Brassica napus HOM05D002376 ORTHO05D004654 7.9e-40 167.5 155 55.5
BolC3t14376H Brassica oleracea HOM05D002376 ORTHO05D004654 7.9e-40 167.5 155 55.5
Medtr5g074880 Medicago truncatula HOM05D002376 ORTHO05D008821 1.0e-39 167.2 128 65.6
BcaC01g05988 Brassica carinata HOM05D002376 ORTHO05D008821 1.3e-39 166.8 140 58.6
Sp4g12890 Schrenkiella parvula HOM05D002376 ORTHO05D008821 1.3e-39 166.8 155 56.1
TPR.G17753 Trifolium pratense HOM05D002376 ORTHO05D008821 1.8e-39 166.4 128 64.8
Ah.15g096510 Amaranthus hybridus HOM05D002376 ORTHO05D008821 5.1e-39 164.9 122 65.6
Aqoxy4G02143 Aquilegia oxysepala HOM05D002376 ORTHO05D008821 6.7e-39 164.5 121 62.8
AL4G25190 Arabidopsis lyrata HOM05D002376 ORTHO05D008821 6.7e-39 164.5 142 57.0
unitig_22.g5204 Utricularia gibba HOM05D006159 ORTHO05D007624 8.7e-39 164.1 132 62.1
Oeu064671.1 Olea europaea HOM05D000883 ORTHO05D002942 1.1e-38 163.7 122 65.6
EL10Ac7g15863 Beta vulgaris HOM05D002376 ORTHO05D008821 1.9e-38 162.9 120 64.2
SalBow2G0685 Salvia bowleyana HOM05D002376 ORTHO05D008821 1.9e-38 162.9 124 61.3
AT2G30330 Arabidopsis thaliana HOM05D002376 ORTHO05D008821 5.7e-38 161.4 155 54.2
CDE06G1730 Ceratophyllum demersum HOM05D002376 ORTHO05D008821 1.6e-37 159.8 121 59.5
Eucgr.B02271 Eucalyptus grandis HOM05D002376 ORTHO05D008821 3.7e-37 158.7 102 73.5
Psat2g052040 Pisum sativum HOM05D002376 ORTHO05D008821 8.2e-37 157.5 160 55.0
Dinv12257 Davidia involucrata HOM05D002376 ORTHO05D008821 1.1e-36 157.1 147 58.5
arahy.Tifrunner.gnm1.ann1.6WW78Y Arachis hypogaea HOM05D002376 ORTHO05D008821 1.4e-36 156.8 199 47.2
Eucgr.L02725 Eucalyptus grandis HOM05D002376 ORTHO05D008821 1.4e-36 156.8 102 72.5
HPP92_009016 Vanilla planifolia HOM05D002376 ORTHO05D008821 2.4e-36 156.0 120 59.2
ATR0586G003 Amborella trichopoda HOM05D002376 ORTHO05D008821 5.3e-36 154.8 123 57.7
Os11g0112300 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 5.9e-35 151.4 129 56.6
COL.COLO4_11185 Corchorus olitorius HOM05D002376 ORTHO05D008821 2.2e-34 149.4 114 69.3
Prupe.6G095400 Prunus persica HOM05D002376 ORTHO05D008821 1.9e-33 146.4 132 54.5
CAN.G1358.8 Capsicum annuum HOM05D002376 ORTHO05D008821 9.4e-33 144.1 104 68.3
Pp3c20_8500 Physcomitrium patens HOM05D002376 ORTHO05D008821 3.9e-31 138.7 120 53.3
Actinidia32596 Actinidia chinensis HOM05D002376 ORTHO05D008821 5.1e-31 138.3 102 65.7
Nn4g26021 Nelumbo nucifera HOM05D002376 ORTHO05D008821 8.8e-31 137.5 102 66.7
Cpa.g.sc2.331 Carica papaya HOM05D002376 ORTHO05D008821 1.1e-30 137.1 111 61.3
CSS0017661 Camellia sinensis var. sinensis HOM05D002376 ORTHO05D008821 2.0e-30 136.3 96 66.7
MD03G1059100 Malus domestica HOM05D002376 ORTHO05D008821 5.7e-30 134.8 127 55.9
PSO017G2121 Papaver somniferum HOM05D002376 ORTHO05D008821 1.3e-29 133.7 106 59.4
Sc06g0008070 Simmondsia chinensis HOM05D002376 ORTHO05D008821 2.2e-29 132.9 120 58.3
MBI15_g06972_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 1.4e-28 130.2 169 43.2
SGA_v2.0_scaffold77G25373 Striga asiatica HOM05D002376 ORTHO05D008821 1.8e-28 129.8 94 69.1
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 3.1e-28 129.0 103 65.0
Mapoly0069s0031 Marchantia polymorpha HOM05D002376 ORTHO05D008821 6.9e-28 127.9 122 49.2
AagrBONN_evm.TU.Sc2ySwM_228.448 Anthoceros agrestis HOM05D002376 ORTHO05D008821 7.7e-27 124.4 121 47.9
FAN21G3738 Fragaria x ananassa HOM05D002376 ORTHO05D008821 2.2e-26 122.9 94 62.8
Hund18966 Selenicereus undatus HOM05D002376 ORTHO05D008821 2.2e-26 122.9 94 66.0
FAN11G0211 Fragaria x ananassa HOM05D002376 ORTHO05D008821 3.2e-25 119.0 118 50.8
Ca_05691_v3 Cicer arietinum L. HOM05D002376 ORTHO05D008821 4.2e-25 118.6 92 69.6
FAN16G0225 Fragaria x ananassa HOM05D002376 ORTHO05D008821 9.4e-25 117.5 118 50.0
SHI19244 Sapria himalayana HOM05D002376 ORTHO05D008821 5.7e-22 108.2 126 49.2
CBR_g4891 Chara braunii HOM05D006348 ORTHO05D008261 2.4e-20 102.8 101 46.5
Os12g0416500 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 9.1e-20 100.9 90 55.6
Zm00001eb276260 Zea mays HOM05D002376 ORTHO05D008821 1.1e-17 94.0 74 62.2
MBI07_g35969_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 1.9e-17 93.2 69 66.7
MBI15_g36803_MAGBIO Magnolia biondii HOM05D002376 ORTHO05D008821 1.9e-17 93.2 124 42.7
SMO361G0428 Selaginella moellendorffii HOM05D002376 ORTHO05D008821 5.5e-17 91.7 101 43.6
Os12g0111900 Oryza sativa ssp. japonica HOM05D002376 ORTHO05D008821 3.0e-15 85.9 99 45.5
MD03G1104100 Malus domestica HOM05D002376 ORTHO05D008821 1.1e-12 77.4 154 34.4
ECA248G3831 Erigeron canadensis HOM05D002376 ORTHO05D008821 1.2e-11 73.9 69 56.5
MCO04G004 Micromonas commoda HOM05D002376 ORTHO05D008821 2.2e-10 69.7 111 30.6
EL10Ac2g03070 Beta vulgaris HOM05D000615 ORTHO05D000447 9.7e-06 54.3 33 66.7


User provided reference genes

Program Settings