Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 0.0e+00 1221.1 607 100.0
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 0.0e+00 1114.0 622 91.5
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 0.0e+00 1079.3 622 86.8
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 4.2e-312 1074.3 626 85.9
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 2.1e-269 932.2 629 73.4
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 2.7e-269 931.8 631 73.1
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 4.3e-267 924.5 624 74.0
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 4.4e-264 914.4 631 72.7
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 9.3e-262 906.7 627 72.2
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 7.8e-261 903.7 627 72.1
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 2.3e-260 902.1 627 70.8
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 9.6e-259 896.7 675 67.1
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 1.3e-258 896.3 631 71.2
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 4.8e-258 894.4 627 71.3
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 1.1e-257 893.3 627 71.1
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 2.4e-257 892.1 629 70.3
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 6.9e-257 890.6 627 71.1
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 8.4e-255 883.6 610 72.5
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 1.1e-254 883.2 631 70.5
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 3.2e-254 881.7 627 71.0
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 2.7e-253 878.6 627 69.9
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 3.5e-253 878.2 622 70.7
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 5.6e-251 870.9 631 68.6
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 6.2e-250 867.5 628 69.6
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 1.4e-249 866.3 630 69.4
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 2.0e-248 862.4 631 69.1
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 1.3e-247 859.8 627 69.2
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 1.7e-247 859.4 608 69.2
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 2.2e-247 859.0 628 68.9
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 2.2e-247 859.0 631 68.3
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 3.2e-246 855.1 633 67.6
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 4.2e-246 854.7 627 68.7
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 1.2e-245 853.2 627 69.1
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 1.6e-245 852.8 626 68.7
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.0e-244 850.1 630 68.1
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 1.3e-244 849.7 627 69.2
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 3.9e-244 848.2 635 66.9
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 1.9e-243 845.9 627 67.5
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 2.5e-243 845.5 627 66.5
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 2.5e-243 845.5 653 66.6
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 1.3e-242 843.2 626 66.5
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.6e-242 842.8 631 68.1
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 2.8e-242 842.0 627 67.9
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 6.2e-242 840.9 627 68.3
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 1.4e-241 839.7 613 68.7
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 5.3e-241 837.8 596 69.0
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 1.5e-240 836.3 630 66.2
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 1.5e-240 836.3 627 65.6
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 1.5e-240 836.3 573 72.4
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 3.4e-240 835.1 631 67.0
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 6.5e-239 830.9 629 65.5
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 3.2e-238 828.6 629 65.5
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 9.3e-238 827.0 627 65.9
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 2.1e-237 825.9 627 65.9
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 3.5e-237 825.1 451 90.9
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 4.6e-237 824.7 626 65.8
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 6.7e-236 820.8 628 65.8
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 8.7e-236 820.5 635 66.6
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 2.5e-235 818.9 624 65.4
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 3.3e-235 818.5 607 66.4
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 9.7e-235 817.0 624 64.3
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 3.1e-233 812.0 634 65.1
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 5.3e-233 811.2 666 63.2
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 2.0e-232 809.3 624 64.4
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 5.9e-232 807.7 592 67.6
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 3.8e-231 805.1 624 63.5
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 8.5e-231 803.9 615 67.5
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 7.2e-230 800.8 628 64.0
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 7.9e-229 797.3 629 65.0
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 1.0e-228 797.0 633 63.8
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 1.8e-228 796.2 592 66.7
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 8.8e-228 793.9 630 64.9
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 2.5e-227 792.3 620 65.5
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 5.7e-227 791.2 631 62.0
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 7.4e-227 790.8 631 63.2
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 2.2e-226 789.3 631 63.4
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 6.3e-226 787.7 637 63.4
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 6.3e-226 787.7 633 63.5
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 6.3e-226 787.7 633 63.5
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 1.3e-223 780.0 631 63.2
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 1.9e-222 776.2 587 66.1
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 2.6e-219 765.8 572 65.7
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 2.8e-218 762.3 589 64.2
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 2.8e-218 762.3 625 61.1
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 3.7e-218 761.9 625 62.2
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 8.5e-215 750.7 623 61.6
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 1.7e-210 736.5 624 60.6
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 8.2e-210 734.2 548 67.5
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 4.7e-205 718.4 627 59.0
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 1.6e-200 703.4 626 56.5
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 1.9e-190 669.8 602 56.3
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 2.4e-177 626.3 441 71.0
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 2.7e-176 622.9 447 68.2
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 1.9e-169 600.1 416 70.2
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 7.0e-169 598.2 636 47.8
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 6.6e-167 591.7 492 60.8
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 1.7e-159 567.0 640 47.0
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 4.2e-153 545.8 418 66.5
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 4.0e-148 529.3 398 67.1
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.9e-145 520.4 399 64.7
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 5.4e-145 518.8 609 47.1
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 6.0e-144 515.4 616 44.8
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 4.3e-118 429.5 420 56.9
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 1.6e-112 411.0 602 41.0
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 1.4e-100 371.3 767 32.3
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 1.6e-83 314.7 274 63.1
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 1.3e-42 178.7 163 57.1
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 7.3e-41 172.9 208 45.2
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 2.1e-40 171.4 182 49.5
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 8.9e-39 166.0 152 55.9
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 1.4e-36 158.7 174 48.3
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 1.5e-30 138.7 82 79.3
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 9.9e-22 109.4 193 41.5
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 1.1e-15 89.4 80 60.0
SMO165G0130 Selaginella moellendorffii HOM05D000740 ORTHO05D007141 2.8e-08 64.7 232 26.3
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 8.2e-08 63.2 35 80.0
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 6.9e-07 60.1 40 67.5
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 2.6e-06 58.2 91 40.7


User provided reference genes

Program Settings