Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010771 Sechium edule HOM05D008044 ORTHO05D010106 2.7e-94 348.6 169 100.0
CsaV3_3G019660 Cucumis sativus L. HOM05D008044 ORTHO05D010106 4.3e-84 314.7 164 89.6
MELO3C019381.2 Cucumis melo HOM05D008044 ORTHO05D010106 4.8e-83 311.2 164 89.6
ClCG05G009120 Citrullus lanatus HOM05D008044 ORTHO05D010106 2.9e-72 275.4 140 90.7
Glyma.04G232600 Glycine max HOM05D008044 ORTHO05D010106 2.2e-64 249.2 166 71.1
CiPaw.06G043900 Carya illinoinensis HOM05D008044 ORTHO05D010106 5.5e-63 244.6 164 72.0
Glyma.06G132400 Glycine max HOM05D008044 ORTHO05D010106 6.1e-62 241.1 166 69.9
Sabra15G0006200 Salix brachista HOM05D002361 ORTHO05D002843 1.0e-61 240.4 164 69.5
Medtr3g092020 Medicago truncatula HOM05D008044 ORTHO05D010106 1.8e-61 239.6 167 68.9
Dinv35361 Davidia involucrata HOM05D008044 ORTHO05D010106 3.0e-61 238.8 165 69.7
GSVIVG01038604001 Vitis vinifera HOM05D008044 ORTHO05D010106 1.5e-60 236.5 165 67.9
arahy.Tifrunner.gnm1.ann1.4AVA7A Arachis hypogaea HOM05D008044 ORTHO05D010106 5.7e-60 234.6 167 67.1
Dinv29244 Davidia involucrata HOM05D008044 ORTHO05D010106 5.7e-60 234.6 164 68.3
TPR.G33642 Trifolium pratense HOM05D008044 ORTHO05D010106 7.4e-60 234.2 170 65.3
TAR636G0016 Trochodendron aralioides HOM05D008044 ORTHO05D010106 7.4e-60 234.2 164 68.3
arahy.Tifrunner.gnm1.ann1.QU8WMY Arachis hypogaea HOM05D008044 ORTHO05D010106 1.3e-59 233.4 167 67.1
QL09p007646 Quercus lobata HOM05D008044 ORTHO05D010106 1.3e-59 233.4 195 62.6
Lalb_Chr23g0271711 Lupinus albus HOM05D008044 ORTHO05D010106 8.2e-59 230.7 166 68.1
Manes.01G037300 Manihot esculenta HOM05D008044 ORTHO05D010106 8.2e-59 230.7 163 68.1
Phvul.009G048200 Phaseolus vulgaris HOM05D008044 ORTHO05D010106 8.2e-59 230.7 161 66.5
Atru.chr12.2313 Acer truncatum HOM05D008044 ORTHO05D010106 1.8e-58 229.6 167 67.7
Cfa016194 Carpinus fangiana HOM05D008044 ORTHO05D010106 4.1e-58 228.4 164 72.0
Eucgr.A01433 Eucalyptus grandis HOM05D008044 ORTHO05D010106 5.3e-58 228.0 165 67.3
Psat5g074880 Pisum sativum HOM05D008044 ORTHO05D010106 5.3e-58 228.0 164 65.9
Lj1g0025539 Lotus japonicus HOM05D008044 ORTHO05D010106 1.6e-57 226.5 167 64.1
Ciclev10022664m.g Citrus clementina HOM05D008044 ORTHO05D010106 5.0e-56 221.5 164 65.9
CSS0007407 Camellia sinensis var. sinensis HOM05D008044 ORTHO05D010106 2.5e-55 219.2 163 68.1
Thecc.03G204500 Theobroma cacao HOM05D008044 ORTHO05D010106 3.2e-55 218.8 165 63.0
AUR62035573 Chenopodium quinoa HOM05D008044 ORTHO05D010106 4.2e-55 218.4 164 65.9
AUR62006056 Chenopodium quinoa HOM05D008044 ORTHO05D010106 1.0e-53 213.8 164 64.6
MSTRG.8632 Avicennia marina HOM05D008044 ORTHO05D010106 1.4e-53 213.4 164 64.0
PSO063G1947 Papaver somniferum HOM05D008044 ORTHO05D010106 1.8e-53 213.0 164 61.0
DCAR_020347 Daucus carota HOM05D008044 ORTHO05D010106 3.0e-53 212.2 164 62.2
Cc02_g01150 Coffea canephora HOM05D008044 ORTHO05D010106 1.5e-52 209.9 164 65.9
Duzib205G1586 Durio zibethinus HOM05D008044 ORTHO05D010106 2.0e-52 209.5 166 63.3
PGR042G2636 Punica granatum HOM05D008044 ORTHO05D010106 1.7e-51 206.5 167 62.9
CiPaw.05G200900 Carya illinoinensis HOM05D008044 ORTHO05D010106 2.8e-51 205.7 164 65.2
SGA_v2.0_scaffold44G16829 Striga asiatica HOM05D008044 ORTHO05D010106 2.8e-51 205.7 164 62.2
Sc25g0000980 Simmondsia chinensis HOM05D008044 ORTHO05D010106 4.8e-51 204.9 166 63.9
Gorai.003G122500 Gossypium raimondii HOM05D008044 ORTHO05D010106 6.3e-51 204.5 166 58.4
Gohir.D03G116200 Gossypium hirsutum HOM05D008044 ORTHO05D010106 8.3e-51 204.1 166 58.4
Migut.F00176 Erythranthe guttata HOM05D008044 ORTHO05D010106 1.4e-50 203.4 164 59.1
Gohir.A03G051500 Gossypium hirsutum HOM05D008044 ORTHO05D010106 1.4e-50 203.4 166 58.4
Haze_00261 Corylus avellana HOM05D008044 ORTHO05D010106 1.8e-50 203.0 136 72.8
Hund11636 Selenicereus undatus HOM05D008044 ORTHO05D010106 4.1e-50 201.8 172 59.3
ATR0620G028 Amborella trichopoda HOM05D008044 ORTHO05D010106 7.0e-50 201.1 166 61.4
Aqoxy5G02418 Aquilegia oxysepala HOM05D008044 ORTHO05D010106 7.0e-50 201.1 164 60.4
Lsat_1_v5_gn_2_135221 Lactuca sativa HOM05D008044 ORTHO05D010106 2.0e-49 199.5 165 60.0
Solyc03g082670.3 Solanum lycopersicum HOM05D008044 ORTHO05D010106 2.0e-49 199.5 164 61.0
PGSC0003DMG400018537 Solanum tuberosum HOM05D008044 ORTHO05D010106 2.7e-49 199.1 164 61.0
CAN.G481.61 Capsicum annuum HOM05D008044 ORTHO05D010106 3.5e-49 198.7 167 61.1
Nitab4.5_0008197g0010 Nicotiana tabacum HOM05D008044 ORTHO05D010106 6.5e-48 194.5 164 60.4
Ca_16735_v3 Cicer arietinum L. HOM05D008044 ORTHO05D010106 1.5e-47 193.4 134 69.4
EL10Ac3g05235 Beta vulgaris HOM05D008044 ORTHO05D010106 2.5e-47 192.6 139 67.6
Zm00001eb187590 Zea mays HOM05D008044 ORTHO05D010106 4.2e-47 191.8 159 60.4
MBI04_g11918_MAGBIO Magnolia biondii HOM05D008044 ORTHO05D010106 7.2e-47 191.0 188 54.3
Actinidia08675 Actinidia chinensis HOM05D008044 ORTHO05D010106 9.4e-47 190.7 133 66.2
HanXRQChr04g0100441 Helianthus annuus HOM05D008044 ORTHO05D010106 1.6e-46 189.9 165 57.0
CANSAT21G1192 Cannabis sativa HOM05D008044 ORTHO05D010106 2.7e-46 189.1 164 58.5
Oeu037043.1 Olea europaea HOM05D001626 ORTHO05D010106 1.4e-45 186.8 160 60.0
SGA_v2.0_scaffold18G08440 Striga asiatica HOM05D008044 ORTHO05D010106 3.0e-45 185.7 166 57.2
SEGI_00721 Sequoiadendron giganteum HOM05D008044 ORTHO05D010106 1.3e-43 180.3 176 52.3
SalBow4G0010 Salvia bowleyana HOM05D008044 ORTHO05D010106 1.4e-42 176.8 170 54.1
Hma1.2p1_0512F.1_g169310 Hydrangea macrophylla HOM05D008044 ORTHO05D010106 1.2e-41 173.7 131 64.1
PSO782G0454 Papaver somniferum HOM05D008044 ORTHO05D010106 5.9e-41 171.4 134 61.2
COL.COLO4_16822 Corchorus olitorius HOM05D004333 ORTHO05D005363 3.3e-39 165.6 152 55.3
Nitab4.5_0010367g0020 Nicotiana tabacum HOM05D008044 ORTHO05D010106 1.6e-38 163.3 145 56.6
Sopen03g022430 Solanum pennellii HOM05D008044 ORTHO05D010106 2.6e-36 156.0 131 60.3
Ah.07g205140 Amaranthus hybridus HOM05D008044 ORTHO05D010106 1.7e-35 153.3 164 51.8
Rhsim03G0212200 Rhododendron simsii HOM05D004333 ORTHO05D005363 1.0e-32 144.1 133 57.1
Zm00001eb421680 Zea mays HOM05D001260 ORTHO05D010106 5.0e-32 141.7 94 67.0
CDE02G3408 Ceratophyllum demersum HOM05D008044 ORTHO05D010106 3.1e-29 132.5 108 56.5
VMungo1309G3147 Vigna mungo HOM05D004333 ORTHO05D005363 1.5e-28 130.2 81 70.4
Os02g0686500 Oryza sativa ssp. japonica HOM05D008044 ORTHO05D010106 2.2e-27 126.3 80 70.0
Peaxi162Scf00740g00427 Petunia axillaris HOM05D008044 ORTHO05D010106 4.9e-27 125.2 164 44.5
Mapoly0007s0051 Marchantia polymorpha HOM05D008044 ORTHO05D010106 3.3e-23 112.5 177 37.9
Lsat_1_v5_gn_9_14140 Lactuca sativa HOM05D008044 ORTHO05D010106 2.3e-21 106.3 153 42.5
AagrBONN_evm.TU.Sc2ySwM_117.1515 Anthoceros agrestis HOM05D008044 ORTHO05D010106 4.0e-21 105.5 188 33.5
Nn1g00365 Nelumbo nucifera HOM05D008044 ORTHO05D010106 8.9e-21 104.4 84 63.1
ECA238G1983 Erigeron canadensis HOM05D008044 ORTHO05D010106 3.0e-16 89.4 84 56.0
Os06g0709100 Oryza sativa ssp. japonica HOM05D005374 ORTHO05D006534 9.5e-07 57.8 91 36.3
Zm00001eb227600 Zea mays HOM05D005374 ORTHO05D006534 2.8e-06 56.2 92 35.9
TWI18G0367 Tripterygium wilfordii HOM05D005374 ORTHO05D006534 6.2e-06 55.1 144 28.5


User provided reference genes

Program Settings