Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 2.1e-80 303.1 267 100.0
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 9.3e-57 224.6 267 82.4
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 1.6e-56 223.8 271 83.4
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 1.6e-45 187.2 249 77.5
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 1.2e-35 154.5 266 67.7
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 3.4e-35 152.9 265 68.3
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 4.5e-35 152.5 266 66.9
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 3.8e-34 149.4 288 59.4
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 5.0e-34 149.1 277 66.1
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 8.5e-34 148.3 244 71.7
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 1.1e-33 147.9 282 64.9
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 1.9e-33 147.1 281 63.7
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 2.5e-33 146.7 244 68.4
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 4.2e-33 146.0 279 62.7
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 4.7e-32 142.5 268 61.2
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 4.7e-32 142.5 268 61.2
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 4.7e-32 142.5 283 59.7
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 4.7e-32 142.5 282 60.3
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 1.4e-31 141.0 283 62.9
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 1.8e-31 140.6 288 61.5
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 2.3e-31 140.2 274 59.9
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 2.3e-31 140.2 277 59.9
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 3.0e-31 139.8 284 62.3
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 3.9e-31 139.4 279 67.4
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 3.9e-31 139.4 284 62.3
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 5.1e-31 139.0 282 55.0
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 5.1e-31 139.0 281 58.4
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 5.1e-31 139.0 318 58.5
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 6.7e-31 138.7 283 59.4
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 1.5e-30 137.5 259 67.2
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 2.0e-30 137.1 276 62.7
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 2.6e-30 136.7 150 70.7
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 4.4e-30 136.0 268 61.2
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 7.4e-30 135.2 273 64.1
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 9.7e-30 134.8 276 64.5
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 9.7e-30 134.8 259 49.0
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 9.7e-30 134.8 272 59.6
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 1.7e-29 134.0 275 62.9
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 2.2e-29 133.7 150 74.0
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 2.8e-29 133.3 240 62.1
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 3.7e-29 132.9 279 61.6
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 1.1e-28 131.3 276 60.1
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 1.8e-28 130.6 279 54.8
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 7.0e-28 128.6 156 73.7
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 9.1e-28 128.3 280 52.5
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 1.2e-27 127.9 279 60.6
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 1.2e-27 127.9 283 52.3
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 1.6e-27 127.5 268 60.8
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 3.5e-27 126.3 101 69.3
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 3.5e-27 126.3 101 69.3
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 3.5e-27 126.3 278 58.6
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 5.9e-27 125.6 286 53.5
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 7.7e-27 125.2 282 62.4
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 1.0e-26 124.8 155 53.5
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 1.0e-26 124.8 287 61.7
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 1.0e-26 124.8 284 60.6
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 1.3e-26 124.4 285 63.2
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 1.3e-26 124.4 281 56.9
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 1.7e-26 124.0 268 63.8
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.7e-26 124.0 283 51.6
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.7e-26 124.0 283 51.6
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 2.2e-26 123.6 154 76.0
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 2.2e-26 123.6 271 63.5
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 5.0e-26 122.5 283 60.8
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 5.0e-26 122.5 288 58.7
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 6.5e-26 122.1 127 67.7
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 1.5e-25 120.9 276 59.4
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.9e-25 120.6 155 52.3
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 1.9e-25 120.6 273 61.5
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 2.5e-25 120.2 273 59.3
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 5.5e-25 119.0 277 36.1
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 5.5e-25 119.0 159 71.1
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 9.4e-25 118.2 103 64.1
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 2.7e-24 116.7 287 57.8
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 2.7e-24 116.7 271 41.3
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 6.1e-24 115.5 103 63.1
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 6.1e-24 115.5 104 60.6
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 8.0e-24 115.2 282 58.9
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 2.3e-23 113.6 284 58.8
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 2.3e-23 113.6 277 58.8
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 8.8e-23 111.7 103 69.9
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 1.1e-22 111.3 103 68.9
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 2.6e-22 110.2 103 68.0
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 3.3e-22 109.8 103 68.0
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 4.4e-22 109.4 105 64.8
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 2.8e-21 106.7 274 56.6
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 8.2e-21 105.1 283 51.6
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 1.1e-20 104.8 277 49.8
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.1e-20 104.8 155 53.5
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 5.3e-20 102.4 226 62.8
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 2.7e-19 100.1 280 58.2
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 1.7e-18 97.4 103 53.4
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 1.7e-18 97.4 103 53.4
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 2.5e-17 93.6 103 63.1
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 2.1e-16 90.5 105 46.7
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 2.1e-16 90.5 105 46.7
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 4.0e-15 86.3 106 52.8
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 4.0e-15 86.3 103 45.6
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 4.1e-12 76.3 102 49.0
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 1.7e-10 70.9 103 52.4
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 4.2e-09 66.2 53 50.9
Nitab4.5_0001842g0090 Nicotiana tabacum HOM05D000368 ORTHO05D009348 7.2e-09 65.5 95 51.6
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 1.2e-08 64.7 51 51.0
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 3.6e-08 63.2 38 68.4
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 4.7e-08 62.8 39 61.5
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 1.2e-06 58.2 28 82.1


User provided reference genes

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