Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009970 Sechium edule HOM05D006827 ORTHO05D008725 2.3e-144 515.8 299 100.0
ClCG06G004410 Citrullus lanatus HOM05D006827 ORTHO05D008725 3.1e-109 399.1 314 78.3
MELO3C021255.2 Cucumis melo HOM05D006827 ORTHO05D008725 1.3e-102 377.1 338 66.6
CiPaw.01G134600 Carya illinoinensis HOM05D006827 ORTHO05D008725 6.1e-81 305.1 223 73.1
Manes.03G207700 Manihot esculenta HOM05D006827 ORTHO05D008725 8.2e-78 294.7 230 68.3
GSVIVG01034952001 Vitis vinifera HOM05D006827 ORTHO05D008725 1.1e-77 294.3 198 73.2
CsaV3_6G028440 Cucumis sativus L. HOM05D006827 ORTHO05D008725 1.4e-77 293.9 264 64.8
Nn3g21791 Nelumbo nucifera HOM05D006827 ORTHO05D008725 3.1e-77 292.7 260 61.5
Gorai.011G202600 Gossypium raimondii HOM05D006827 ORTHO05D008725 2.6e-76 289.7 223 65.9
QL06p013028 Quercus lobata HOM05D006827 ORTHO05D008725 5.9e-76 288.5 251 64.1
Nitab4.5_0002421g0010 Nicotiana tabacum HOM05D006827 ORTHO05D008725 1.3e-75 287.3 207 69.6
Gohir.A10G174600 Gossypium hirsutum HOM05D006827 ORTHO05D008725 1.7e-75 287.0 223 65.9
Cfa015277 Carpinus fangiana HOM05D006827 ORTHO05D008725 5.0e-75 285.4 237 65.0
Thecc.04G305900 Theobroma cacao HOM05D006827 ORTHO05D008725 5.0e-75 285.4 246 63.4
TAR365G1248 Trochodendron aralioides HOM05D006827 ORTHO05D008725 6.5e-75 285.0 182 75.8
Dinv15137 Davidia involucrata HOM05D006827 ORTHO05D008725 8.5e-75 284.6 283 55.8
Solyc01g058190.4 Solanum lycopersicum HOM05D006827 ORTHO05D008725 8.5e-75 284.6 240 64.2
Potri.008G101900 Populus trichocarpa HOM05D006827 ORTHO05D008725 3.2e-74 282.7 240 64.2
Gohir.D10G181100 Gossypium hirsutum HOM05D006827 ORTHO05D008725 5.5e-74 282.0 223 65.0
TWI09G0591 Tripterygium wilfordii HOM05D006827 ORTHO05D008725 7.2e-74 281.6 248 62.5
Nitab4.5_0004047g0010 Nicotiana tabacum HOM05D006827 ORTHO05D008725 1.6e-73 280.4 238 63.4
TWI53G1816 Tripterygium wilfordii HOM05D006827 ORTHO05D008725 2.1e-73 280.0 226 65.5
Duzib212G0426 Durio zibethinus HOM05D006827 ORTHO05D008725 2.7e-73 279.6 223 64.6
CsaV3_UNG230110 Cucumis sativus L. HOM05D006827 ORTHO05D008725 3.6e-73 279.3 176 82.4
Sopen01g023660 Solanum pennellii HOM05D006827 ORTHO05D008725 1.4e-72 277.3 240 62.1
CAN.G281.10 Capsicum annuum HOM05D006827 ORTHO05D008725 6.7e-72 275.0 205 68.3
AUR62016245 Chenopodium quinoa HOM05D002153 ORTHO05D002137 6.7e-72 275.0 231 60.2
COL.COLO4_34569 Corchorus olitorius HOM05D001281 ORTHO05D001139 6.7e-72 275.0 208 66.3
Oeu014225.1 Olea europaea HOM05D006827 ORTHO05D008725 6.7e-72 275.0 243 62.1
CANSAT78G0077 Cannabis sativa HOM05D006827 ORTHO05D008725 8.8e-72 274.6 218 66.1
arahy.Tifrunner.gnm1.ann1.W8AIPN Arachis hypogaea HOM05D006827 ORTHO05D008725 1.1e-71 274.2 215 65.1
arahy.Tifrunner.gnm1.ann1.7T6EZL Arachis hypogaea HOM05D006827 ORTHO05D008725 1.5e-71 273.9 215 65.1
PGSC0003DMG400015968 Solanum tuberosum HOM05D006827 ORTHO05D008725 1.5e-71 273.9 236 62.3
FvH4_4g20660 Fragaria vesca HOM05D006827 ORTHO05D008725 2.0e-71 273.5 236 60.6
FAN12G3056 Fragaria x ananassa HOM05D006827 ORTHO05D008725 2.0e-71 273.5 236 60.6
MD13G1149000 Malus domestica HOM05D006827 ORTHO05D008725 2.0e-71 273.5 229 61.6
MBI18_g27379_MAGBIO Magnolia biondii HOM05D006827 ORTHO05D008725 2.6e-71 273.1 257 58.8
Cc03_g00540 Coffea canephora HOM05D006827 ORTHO05D008725 3.3e-71 272.7 224 64.7
THA.LOC104820318 Tarenaya hassleriana HOM05D006827 ORTHO05D008725 3.3e-71 272.7 188 70.7
BcaB04g20857 Brassica carinata HOM05D006827 ORTHO05D008725 5.7e-71 271.9 181 71.8
Aa31LG8G4170 Aethionema arabicum HOM05D006827 ORTHO05D008725 7.4e-71 271.6 187 70.1
Ah.13g071520 Amaranthus hybridus HOM05D006827 ORTHO05D008725 9.7e-71 271.2 188 70.2
PSO210G0119 Papaver somniferum HOM05D006827 ORTHO05D008725 9.7e-71 271.2 208 64.9
PGR031G1277 Punica granatum HOM05D006827 ORTHO05D008725 9.7e-71 271.2 184 70.1
Ciclev10005460m.g Citrus clementina HOM05D006827 ORTHO05D008725 2.2e-70 270.0 178 75.3
PSO761G0463 Papaver somniferum HOM05D006827 ORTHO05D008725 2.8e-70 269.6 207 64.7
Prupe.1G113000 Prunus persica HOM05D006827 ORTHO05D008725 2.8e-70 269.6 264 57.6
Haze_01351 Corylus avellana HOM05D002153 ORTHO05D002137 3.7e-70 269.2 271 57.2
EL10Ac3g05552 Beta vulgaris HOM05D006827 ORTHO05D008725 4.8e-70 268.9 234 61.5
BraA01t03774Z Brassica rapa HOM05D006827 ORTHO05D008725 4.8e-70 268.9 180 71.1
Eucgr.B03980 Eucalyptus grandis HOM05D006827 ORTHO05D008725 4.8e-70 268.9 265 58.1
Hma1.2p1_0516F.1_g170510 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 6.3e-70 268.5 223 64.6
QL03p023650 Quercus lobata HOM05D006827 ORTHO05D008725 6.3e-70 268.5 294 54.4
Sc25g0003190 Simmondsia chinensis HOM05D006827 ORTHO05D008725 1.1e-69 267.7 186 70.4
Actinidia31567 Actinidia chinensis HOM05D006827 ORTHO05D008725 1.4e-69 267.3 235 61.3
BcaC09g48673 Brassica carinata HOM05D006827 ORTHO05D008725 1.4e-69 267.3 178 71.3
BcaC09g48674 Brassica carinata HOM05D006827 ORTHO05D008725 1.4e-69 267.3 178 71.3
C01p47070 Brassica napus HOM05D006827 ORTHO05D008725 1.4e-69 267.3 178 71.3
FAN07G0118 Fragaria x ananassa HOM05D006827 ORTHO05D008725 1.4e-69 267.3 242 58.3
DCAR_023373 Daucus carota HOM05D006827 ORTHO05D008725 2.4e-69 266.5 179 73.2
Glyma.09G032900 Glycine max HOM05D001281 ORTHO05D008725 3.1e-69 266.2 232 58.6
CARHR092440 Cardamine hirsuta HOM05D006827 ORTHO05D008725 4.1e-69 265.8 181 68.5
Glyma.15G137900 Glycine max HOM05D006827 ORTHO05D008725 4.1e-69 265.8 222 59.0
A01p37130 Brassica napus HOM05D006827 ORTHO05D008725 7.0e-69 265.0 176 71.6
BolC1t04673H Brassica oleracea HOM05D006827 ORTHO05D008725 7.0e-69 265.0 178 70.8
HanXRQChr05g0148611 Helianthus annuus HOM05D006827 ORTHO05D008725 1.2e-68 264.2 251 60.2
Sp3g15370 Schrenkiella parvula HOM05D006827 ORTHO05D008725 2.0e-68 263.5 179 69.8
unitig_88.g27700 Utricularia gibba HOM05D006827 ORTHO05D008725 2.0e-68 263.5 186 68.3
AL3G30170 Arabidopsis lyrata HOM05D006827 ORTHO05D008725 4.5e-68 262.3 180 69.4
Lj6g0001147 Lotus japonicus HOM05D001281 ORTHO05D001139 4.5e-68 262.3 181 69.6
MSTRG.3845 Avicennia marina HOM05D006827 ORTHO05D008725 7.7e-68 261.5 230 61.3
Ca_00959_v3 Cicer arietinum L. HOM05D006827 ORTHO05D008725 7.7e-68 261.5 183 69.4
Thhalv10021204m.g Eutrema salsugineum HOM05D006827 ORTHO05D008725 7.7e-68 261.5 176 68.8
Carub.0003s1692 Capsella rubella HOM05D006827 ORTHO05D008725 1.0e-67 261.2 225 60.4
AT3G17170 Arabidopsis thaliana HOM05D006827 ORTHO05D008725 1.3e-67 260.8 178 68.0
Medtr2g033490 Medicago truncatula HOM05D006827 ORTHO05D008725 1.7e-67 260.4 232 60.8
Phvul.006G120200 Phaseolus vulgaris HOM05D006827 ORTHO05D008725 1.7e-67 260.4 189 66.1
RcHm_v2.0_Chr4g0426061 Rosa chinensis HOM05D006827 ORTHO05D008725 2.9e-67 259.6 234 57.7
Migut.N00027 Erythranthe guttata HOM05D006827 ORTHO05D008725 8.5e-67 258.1 186 68.3
Sabra08G0077100 Salix brachista HOM05D006827 ORTHO05D007631 8.5e-67 258.1 189 68.8
TPR.G33906 Trifolium pratense HOM05D006827 ORTHO05D008725 1.9e-66 256.9 229 59.8
VMungo0540G1290 Vigna mungo HOM05D006827 ORTHO05D008725 1.9e-66 256.9 221 57.9
arahy.Tifrunner.gnm1.ann1.GV6LK0 Arachis hypogaea HOM05D006827 ORTHO05D008725 2.5e-66 256.5 232 59.1
Lsat_1_v5_gn_6_116121 Lactuca sativa HOM05D006827 ORTHO05D008725 3.2e-66 256.1 252 57.1
ECA246G4663 Erigeron canadensis HOM05D002153 ORTHO05D002137 1.6e-65 253.8 176 70.5
SGA_v2.0_scaffold227G43227 Striga asiatica HOM05D006827 ORTHO05D008725 6.1e-65 251.9 183 68.9
Lj3A834T69 Lonicera japonica HOM05D006827 ORTHO05D008725 8.0e-65 251.5 174 69.5
HPP92_027958 Vanilla planifolia HOM05D006827 ORTHO05D008725 4.0e-64 249.2 232 60.3
Zm00001eb136900 Zea mays HOM05D006827 ORTHO05D008725 1.2e-63 247.7 185 64.3
Psat1g161800 Pisum sativum HOM05D006827 ORTHO05D008725 3.3e-63 246.1 218 61.5
Os12g0563200 Oryza sativa ssp. japonica HOM05D006827 ORTHO05D008725 4.4e-63 245.7 185 64.3
ATR1120G107 Amborella trichopoda HOM05D006827 ORTHO05D008725 5.7e-63 245.4 192 63.0
Aqoxy2G02656 Aquilegia oxysepala HOM05D006827 ORTHO05D008725 2.8e-62 243.0 166 72.9
Lalb_Chr18g0058551 Lupinus albus HOM05D006827 ORTHO05D008725 4.8e-62 242.3 200 64.0
CAN.G582.1 Capsicum annuum HOM05D006827 ORTHO05D008725 1.6e-60 237.3 181 64.6
Hund11994 Selenicereus undatus HOM05D006827 ORTHO05D008725 2.0e-60 236.9 239 56.5
Rhsim04G0242100 Rhododendron simsii HOM05D006827 ORTHO05D008725 1.0e-59 234.6 208 62.5
Peaxi162Scf00228g00735 Petunia axillaris HOM05D006827 ORTHO05D008725 2.7e-57 226.5 213 60.6
vmacro07963 Vaccinium macrocarpon HOM05D006827 ORTHO05D008725 3.5e-52 209.5 202 58.9
Atru.chr4.3069 Acer truncatum HOM05D006827 ORTHO05D008725 2.1e-49 200.3 126 77.8
Hma1.2p1_0013F.1_g008250 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 2.3e-43 180.3 115 73.0
MD16G1149200 Malus domestica HOM05D006827 ORTHO05D008725 1.4e-40 171.0 171 55.0
arahy.Tifrunner.gnm1.ann1.25F6GK Arachis hypogaea HOM05D006827 ORTHO05D008725 1.5e-39 167.5 160 57.5
SEGI_22692 Sequoiadendron giganteum HOM05D006827 ORTHO05D008725 1.7e-35 154.1 116 66.4
Pp3c14_11410 Physcomitrium patens HOM05D006827 ORTHO05D008725 4.7e-33 146.0 162 45.1
Pp3c14_11414 Physcomitrium patens HOM05D006827 ORTHO05D008725 4.7e-33 146.0 162 45.1
Mapoly0005s0049 Marchantia polymorpha HOM05D006827 ORTHO05D008725 1.8e-32 144.1 162 44.4
CBR_g38487 Chara braunii HOM05D006827 ORTHO05D008725 1.1e-26 124.8 154 42.9
Cpa.g.sc9.7 Carica papaya HOM05D001281 ORTHO05D008725 5.6e-26 122.5 133 56.4
SMO351G0308 Selaginella moellendorffii HOM05D006827 ORTHO05D008725 3.6e-25 119.8 98 52.0
AUR62032776 Chenopodium quinoa HOM05D006827 ORTHO05D008725 3.1e-24 116.7 103 58.3
Psat7g189800 Pisum sativum HOM05D006827 ORTHO05D008725 3.6e-17 93.2 76 59.2
BcaC05g28821 Brassica carinata HOM05D006827 ORTHO05D023991 8.9e-16 88.6 98 51.0
Hma1.2p1_0013F.1_g008240 Hydrangea macrophylla HOM05D006827 ORTHO05D008725 8.4e-14 82.0 64 67.2
PRCOL_00004690 Prasinoderma coloniale HOM05D006827 ORTHO05D008725 1.4e-13 81.3 101 43.6
Zm00001eb028550 Zea mays HOM05D006608 ORTHO05D008316 7.8e-12 75.5 128 37.5
C05p49280 Brassica napus HOM05D006827 ORTHO05D008725 7.3e-10 68.9 88 45.5
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 9.6e-10 68.6 88 40.9
A05p32600 Brassica napus HOM05D006827 ORTHO05D008725 1.4e-08 64.7 69 46.4
BraA05t22084Z Brassica rapa HOM05D006827 ORTHO05D008725 1.4e-08 64.7 69 46.4
Psat4g040600 Pisum sativum HOM05D006827 ORTHO05D008725 1.4e-08 64.7 147 32.7
TAR633G1668 Trochodendron aralioides HOM05D006827 ORTHO05D023991 2.0e-07 60.8 39 66.7
BcaB06g25810 Brassica carinata HOM05D006827 ORTHO05D023991 5.8e-07 59.3 43 58.1


User provided reference genes

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