Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 1.0e-72 276.6 131 100.0
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 1.9e-63 245.7 131 88.5
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 2.8e-62 241.9 131 87.0
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 2.3e-61 238.8 131 86.3
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 5.4e-58 227.6 128 83.6
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 1.2e-57 226.5 128 83.6
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 2.7e-57 225.3 127 82.7
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 3.5e-57 224.9 127 81.1
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 6.0e-57 224.2 133 78.2
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 1.0e-56 223.4 127 79.5
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 1.3e-56 223.0 127 79.5
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 1.3e-56 223.0 128 79.7
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 1.3e-56 223.0 127 81.1
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 1.7e-56 222.6 126 81.7
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 2.3e-56 222.2 128 79.7
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 2.3e-56 222.2 127 80.3
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 2.3e-56 222.2 127 80.3
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 3.0e-56 221.9 127 81.9
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 3.9e-56 221.5 127 81.9
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 3.9e-56 221.5 127 81.9
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 5.1e-56 221.1 129 80.6
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 6.6e-56 220.7 127 78.7
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 1.9e-55 219.2 127 81.1
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 4.3e-55 218.0 127 81.1
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 4.3e-55 218.0 127 78.7
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 4.3e-55 218.0 128 77.3
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 5.6e-55 217.6 128 80.5
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 5.6e-55 217.6 128 80.5
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 9.5e-55 216.9 126 78.6
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 9.5e-55 216.9 128 80.5
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 9.5e-55 216.9 127 78.7
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 1.2e-54 216.5 127 78.0
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 1.6e-54 216.1 127 78.0
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 2.8e-54 215.3 127 76.4
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 4.7e-54 214.5 128 79.7
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 6.2e-54 214.2 127 78.0
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 6.2e-54 214.2 127 78.0
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 6.2e-54 214.2 128 79.7
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 6.2e-54 214.2 129 79.1
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.1e-53 213.4 128 78.9
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 1.4e-53 213.0 128 77.3
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 1.8e-53 212.6 127 77.2
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 2.3e-53 212.2 127 77.2
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 3.1e-53 211.8 127 76.4
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 3.1e-53 211.8 129 72.9
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 3.1e-53 211.8 128 78.1
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 4.0e-53 211.5 127 76.4
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 5.2e-53 211.1 127 76.4
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 5.2e-53 211.1 127 76.4
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 6.8e-53 210.7 127 75.6
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 8.9e-53 210.3 128 75.8
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 8.9e-53 210.3 127 76.4
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 8.9e-53 210.3 127 76.4
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 8.9e-53 210.3 127 77.2
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 8.9e-53 210.3 127 77.2
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 1.2e-52 209.9 127 77.2
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 1.2e-52 209.9 127 75.6
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 1.2e-52 209.9 127 77.2
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 2.6e-52 208.8 126 77.0
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 3.4e-52 208.4 130 73.1
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 3.4e-52 208.4 127 75.6
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 5.8e-52 207.6 126 74.6
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 5.8e-52 207.6 126 74.6
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 5.8e-52 207.6 126 74.6
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 5.8e-52 207.6 126 74.6
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 5.8e-52 207.6 126 74.6
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 7.6e-52 207.2 126 76.2
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 9.9e-52 206.8 127 74.8
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 1.7e-51 206.1 126 74.6
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 2.9e-51 205.3 163 63.8
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 3.7e-51 204.9 128 71.9
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 3.7e-51 204.9 128 71.9
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 6.4e-51 204.1 127 73.2
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 8.4e-51 203.8 127 73.2
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 1.1e-50 203.4 127 74.0
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 1.4e-50 203.0 127 72.4
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 1.9e-50 202.6 127 72.4
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 2.4e-50 202.2 127 71.7
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 2.4e-50 202.2 128 75.8
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 3.2e-50 201.8 127 73.2
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 1.2e-49 199.9 127 71.7
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 1.6e-49 199.5 120 77.5
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 2.7e-49 198.7 129 72.1
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 1.7e-48 196.1 123 73.2
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 1.5e-47 193.0 127 66.1
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 1.5e-47 193.0 127 69.3
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 1.2e-46 189.9 128 66.4
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 1.2e-46 189.9 131 68.7
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 1.6e-46 189.5 126 69.0
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 2.8e-46 188.7 131 66.4
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 1.1e-45 186.8 124 70.2
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 5.2e-45 184.5 125 68.8
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 1.1e-42 176.8 114 72.8
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 3.2e-42 175.3 128 64.1
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 1.6e-41 172.9 127 60.6
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 6.0e-41 171.0 127 61.4
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 6.0e-41 171.0 128 62.5
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 1.3e-38 163.3 124 60.5
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 1.6e-38 162.9 115 62.6
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 3.8e-35 151.8 128 50.0
Dinv35800 Davidia involucrata HOM05D006951 ORTHO05D008594 6.4e-35 151.0 92 76.1
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 7.9e-33 144.1 129 50.4
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 2.3e-32 142.5 125 54.4
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 5.1e-32 141.4 131 51.1
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 1.8e-29 132.9 153 47.7
TPR.G32820 Trifolium pratense HOM05D006951 ORTHO05D008594 2.6e-28 129.0 81 72.8
SMO118G0389 Selaginella moellendorffii HOM05D006951 ORTHO05D008594 3.4e-28 128.6 124 50.8
CSS0013835 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 9.9e-28 127.1 80 70.0
AT5G03455 Arabidopsis thaliana HOM05D006951 ORTHO05D008594 1.7e-27 126.3 75 80.0
PGR004G2181 Punica granatum HOM05D006951 ORTHO05D008594 2.6e-20 102.4 68 72.1
TPR.G15158 Trifolium pratense HOM05D006951 ORTHO05D008594 3.4e-20 102.1 54 83.3
CSS0008283 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 2.7e-17 92.4 53 77.4
Atru.chr8.1773 Acer truncatum HOM05D006951 ORTHO05D008594 1.3e-16 90.1 55 74.5
BcaC06g32064 Brassica carinata HOM05D006951 ORTHO05D008594 1.5e-15 86.7 53 69.8
Os10g0545700 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 1.3e-14 83.6 54 66.7
Hund14405 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.0e-08 62.4 44 70.5
Hund00749 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.5e-07 59.3 44 65.9
Haze_20905 Corylus avellana HOM05D006951 ORTHO05D008594 1.6e-06 56.6 36 69.4


User provided reference genes

Program Settings