Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 5.4e-278 960.3 461 100.0
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 3.1e-225 785.0 462 83.5
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 2.2e-223 778.9 446 85.4
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 3.4e-208 728.4 459 80.0
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 2.7e-176 622.5 454 68.1
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 5.9e-176 621.3 455 67.3
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 8.5e-175 617.5 449 68.4
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 4.2e-174 615.1 454 66.5
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 4.2e-174 615.1 454 66.5
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 7.2e-174 614.4 456 67.1
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 1.4e-172 610.1 448 67.2
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 3.0e-172 609.0 449 67.9
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 6.8e-172 607.8 455 67.0
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 1.2e-171 607.1 451 67.2
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 2.0e-171 606.3 448 66.5
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 4.4e-171 605.1 451 66.7
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 1.3e-170 603.6 455 65.9
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 1.3e-170 603.6 459 66.7
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 2.8e-170 602.4 449 66.4
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 4.1e-169 598.6 456 66.2
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 9.1e-169 597.4 455 65.3
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 9.1e-169 597.4 453 64.9
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 5.9e-168 594.7 448 64.1
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 1.0e-167 594.0 456 65.6
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 1.7e-167 593.2 448 64.1
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 2.2e-167 592.8 448 64.1
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 1.5e-166 590.1 454 64.5
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 2.5e-166 589.3 454 63.9
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 3.2e-166 589.0 452 64.6
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.6e-165 586.6 454 64.3
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 1.6e-165 586.6 450 63.8
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 1.0e-164 583.9 455 62.9
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 2.3e-164 582.8 431 66.8
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 5.2e-164 581.6 454 64.1
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 6.8e-164 581.3 468 64.5
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 2.6e-163 579.3 442 63.6
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 4.4e-163 578.6 453 62.5
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 4.4e-163 578.6 456 64.5
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 5.7e-163 578.2 486 61.5
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 1.4e-161 573.5 496 61.1
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 5.4e-161 571.6 483 59.2
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 5.9e-160 568.2 432 64.4
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 5.0e-159 565.1 419 64.9
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 8.6e-159 564.3 449 62.6
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 8.6e-159 564.3 441 64.2
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 1.1e-158 563.9 423 66.0
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 5.6e-158 561.6 477 61.6
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 5.6e-158 561.6 419 64.7
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 7.3e-158 561.2 421 63.9
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 9.5e-158 560.8 474 60.8
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 9.5e-158 560.8 457 61.9
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 2.1e-157 559.7 421 63.7
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 3.6e-157 558.9 455 62.0
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 5.2e-156 555.1 451 61.9
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 4.4e-155 552.0 463 59.6
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 2.9e-154 549.3 454 62.1
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 3.7e-154 548.9 450 58.7
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 8.3e-154 547.7 457 60.0
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 3.2e-153 545.8 445 60.0
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 9.2e-153 544.3 454 60.4
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 9.2e-153 544.3 462 60.8
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 1.2e-152 543.9 432 61.6
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 1.6e-152 543.5 407 64.1
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 3.5e-152 542.3 442 59.7
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 1.3e-151 540.4 422 62.8
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 5.0e-151 538.5 452 60.0
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 5.0e-151 538.5 423 62.4
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 6.6e-151 538.1 465 58.3
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 6.6e-151 538.1 486 56.8
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 2.5e-150 536.2 453 59.8
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 8.0e-149 531.2 450 59.8
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 8.9e-148 527.7 428 59.8
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 2.0e-147 526.6 453 58.5
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 3.4e-147 525.8 432 60.6
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 5.8e-147 525.0 442 59.0
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 1.3e-146 523.9 460 57.4
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 1.7e-146 523.5 450 59.3
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 2.2e-146 523.1 462 60.4
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 8.3e-146 521.2 452 59.3
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 2.4e-145 519.6 459 60.8
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 4.1e-145 518.8 448 58.9
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 4.1e-145 518.8 448 58.9
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 3.0e-143 512.7 448 58.7
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 3.9e-143 512.3 434 59.4
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 2.5e-142 509.6 448 58.3
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 5.6e-142 508.4 418 61.7
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 1.6e-141 506.9 481 53.8
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 2.1e-141 506.5 453 57.6
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 1.5e-139 500.4 442 56.6
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 3.7e-138 495.7 447 57.3
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 1.1e-137 494.2 430 59.5
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 1.2e-136 490.7 439 56.7
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 4.3e-134 482.3 410 59.3
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 3.2e-129 466.1 451 52.5
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 3.2e-129 466.1 451 52.5
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 8.6e-127 458.0 439 55.1
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 7.6e-123 444.9 321 67.6
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 3.5e-120 436.0 451 52.1
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 1.0e-111 407.9 466 46.6
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 2.3e-111 406.8 455 47.0
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 9.0e-108 394.8 449 45.4
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 8.4e-106 388.3 320 59.1
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 2.7e-104 383.3 450 48.9
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 2.5e-102 376.7 375 54.4
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 7.4e-102 375.2 314 59.6
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 2.4e-100 370.2 373 52.8
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 5.8e-99 365.5 402 48.3
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 3.5e-96 356.3 311 57.2
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 3.9e-87 326.2 454 43.6
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 2.8e-85 320.1 299 56.5
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 2.7e-64 250.4 308 48.7
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 1.5e-62 244.6 339 39.5
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 4.5e-59 233.0 393 36.4
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 2.5e-57 227.3 144 73.6
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 8.3e-53 212.2 808 25.1
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 1.5e-38 164.9 338 33.4
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 2.0e-35 154.5 95 71.6
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 2.5e-33 147.5 116 60.3
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 8.1e-24 115.9 134 47.8
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 6.4e-21 106.3 74 70.3
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 3.0e-10 70.9 60 60.0


User provided reference genes

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