Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 3.1e-281 971.1 473 100.0
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 3.6e-221 771.5 434 85.7
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 5.5e-177 624.8 384 81.8
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 2.4e-164 582.8 432 64.4
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 5.9e-155 551.6 430 60.5
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 2.8e-149 532.7 426 60.6
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 1.8e-148 530.0 408 61.3
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 1.0e-146 524.2 419 60.1
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.7e-146 523.5 438 58.7
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 1.7e-146 523.5 436 59.4
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 2.9e-146 522.7 433 57.3
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.8e-146 522.3 437 58.6
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 6.5e-146 521.5 428 59.1
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 1.1e-145 520.8 428 60.5
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 1.5e-145 520.4 427 59.0
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 1.5e-145 520.4 427 58.8
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 4.2e-145 518.8 430 57.9
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 7.2e-145 518.1 421 60.3
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 9.4e-145 517.7 430 58.4
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 2.3e-143 513.1 435 57.7
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 4.0e-143 512.3 420 58.6
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 6.8e-143 511.5 428 58.4
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 8.8e-143 511.1 434 58.5
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 2.0e-142 510.0 436 64.7
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 1.6e-139 500.4 426 58.7
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 1.5e-137 493.8 410 58.0
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 7.2e-137 491.5 425 56.9
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 7.2e-137 491.5 432 58.3
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 9.5e-137 491.1 445 56.0
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 2.1e-136 490.0 432 55.8
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 1.8e-135 486.9 431 56.6
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 3.4e-134 482.6 406 58.1
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 4.4e-134 482.3 406 57.9
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 5.7e-134 481.9 431 55.5
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 7.5e-134 481.5 446 54.0
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 6.3e-133 478.4 432 56.2
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 1.4e-132 477.2 432 56.2
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 1.8e-132 476.9 410 57.1
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 1.8e-132 476.9 461 53.4
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 2.4e-132 476.5 421 56.3
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 3.1e-132 476.1 423 56.0
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 7.0e-132 474.9 424 55.0
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 9.2e-132 474.6 411 56.2
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 1.6e-131 473.8 487 51.3
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 2.7e-131 473.0 429 54.8
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 2.3e-130 469.9 429 54.5
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 2.9e-130 469.5 427 54.8
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 6.6e-130 468.4 427 54.3
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 6.6e-130 468.4 423 53.7
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 6.6e-130 468.4 425 55.1
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 1.5e-129 467.2 423 54.1
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 1.9e-129 466.8 425 54.6
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 2.5e-129 466.5 410 55.1
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 9.5e-129 464.5 443 53.0
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 1.6e-128 463.8 440 52.0
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 3.0e-127 459.5 444 52.9
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 1.2e-126 457.6 424 53.8
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 1.5e-126 457.2 380 57.1
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 4.4e-126 455.7 438 52.1
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 6.4e-125 451.8 435 54.3
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 1.8e-124 450.3 431 53.6
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 2.7e-123 446.4 466 50.0
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 7.3e-121 438.3 443 52.8
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 1.2e-120 437.6 431 51.7
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 1.4e-119 434.1 450 52.2
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 3.1e-119 433.0 425 49.4
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 8.9e-119 431.4 430 52.3
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 1.3e-117 427.6 425 48.5
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 2.2e-117 426.8 535 43.4
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 2.9e-117 426.4 439 51.3
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 2.7e-115 419.9 307 63.8
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 1.0e-114 417.9 308 64.0
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 5.0e-114 415.6 454 48.5
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 1.1e-113 414.5 419 51.6
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 3.1e-111 406.4 421 49.4
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 7.5e-110 401.7 431 50.1
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 2.4e-108 396.7 408 50.5
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 3.2e-108 396.4 410 48.8
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 3.5e-107 392.9 353 56.7
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 1.0e-106 391.3 354 53.7
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 1.3e-106 391.0 423 47.0
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 1.7e-106 390.6 308 61.0
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 2.3e-106 390.2 409 48.7
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 4.4e-102 375.9 408 49.0
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 9.9e-102 374.8 409 46.7
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 3.0e-98 363.2 446 47.1
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 2.0e-86 323.9 307 51.5
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 1.6e-83 314.3 302 53.6
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 9.9e-78 295.0 412 41.3
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 3.8e-77 293.1 406 41.6
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 4.9e-77 292.7 412 41.0
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.5e-76 289.3 474 40.7
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 1.2e-75 288.1 474 40.5
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.5e-75 286.6 438 42.2
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 2.3e-74 283.9 279 47.3
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.4e-71 274.6 472 40.0
FAN06G2164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.3e-71 272.7 239 56.9
SalBow6G2835 Salvia bowleyana HOM05D002214 ORTHO05D007367 1.5e-70 271.2 317 45.4
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.1e-63 248.4 412 39.8
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.4e-63 247.3 469 36.7
QL04p010120 Quercus lobata HOM05D002214 ORTHO05D007367 3.2e-60 236.9 255 50.2
Cpa.g.sc125.51 Carica papaya HOM05D002214 ORTHO05D007367 1.4e-55 221.5 268 46.6
Aa31LG10G14890 Aethionema arabicum HOM05D002214 ORTHO05D007367 2.9e-53 213.8 232 48.7
RcHm_v2.0_Chr6g0283161 Rosa chinensis HOM05D002214 ORTHO05D007367 2.9e-53 213.8 325 43.4
Cpa.g.sc125.50 Carica papaya HOM05D002214 ORTHO05D007367 2.5e-52 210.7 197 53.8
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 1.5e-49 201.4 447 30.0
CDE04G0429 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 2.2e-48 197.6 190 51.6
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 6.3e-48 196.1 219 47.9
Hma1.2p1_0685F.1_g203270 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 1.1e-47 195.3 148 60.1
Pp3c8_19810 Physcomitrium patens HOM05D002214 ORTHO05D007367 3.8e-45 186.8 412 27.9
Lj9A641T67 Lonicera japonica HOM05D002214 ORTHO05D007367 3.6e-43 180.3 281 37.7
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 1.8e-42 177.9 171 51.5
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 5.2e-42 176.4 337 33.5
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 2.0e-41 174.5 233 43.8
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.0e-41 174.5 233 43.8
Hund16633 Selenicereus undatus HOM05D002214 ORTHO05D007367 2.8e-40 170.6 151 54.3
FAN06G4994 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.6e-38 164.1 136 59.6
Aa31LG10G14900 Aethionema arabicum HOM05D002214 ORTHO05D007367 4.5e-30 136.7 119 57.1
CBR_g46897 Chara braunii HOM05D002214 ORTHO05D007367 5.0e-29 133.3 370 25.9
SEGI_30351 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 7.2e-28 129.4 140 45.7
Mapoly0009s0234 Marchantia polymorpha HOM05D002214 ORTHO05D007367 4.7e-27 126.7 329 28.9
Thecc.01G405700 Theobroma cacao HOM05D002214 ORTHO05D007367 3.0e-26 124.0 86 64.0
SMO137G0282 Selaginella moellendorffii HOM05D002214 ORTHO05D007367 2.0e-25 121.3 348 27.6
SEGI_07097 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 3.1e-23 114.0 135 41.5
Thecc.01G405800 Theobroma cacao HOM05D002214 ORTHO05D007367 7.0e-23 112.8 90 62.2
Oeu016638.1 Olea europaea HOM05D002214 ORTHO05D007367 9.1e-23 112.5 104 54.8
Hma1.2p1_0685F.1_g203250 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 3.4e-17 94.0 122 41.8
Duzib133G0745 Durio zibethinus HOM05D002214 ORTHO05D007367 7.5e-17 92.8 97 45.4
Cfa025993 Carpinus fangiana HOM05D002214 ORTHO05D125925 1.2e-09 68.9 233 26.2
FAN27G0150 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.8e-09 66.6 141 31.9
Lj9C641T18 Lonicera japonica HOM05D002214 ORTHO05D007367 5.8e-09 66.6 86 46.5
FAN27G0866 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.9e-08 64.3 82 43.9
CDE04G1985 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 8.3e-08 62.8 53 60.4
Atru.chr11.2520 Acer truncatum HOM05D002214 ORTHO05D007367 1.2e-06 58.9 50 56.0
FAN24G2079 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.7e-06 57.8 46 56.5


User provided reference genes

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