Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007428 Sechium edule HOM05D005762 ORTHO05D006823 9.8e-101 370.2 190 100.0
Sed0006648 Sechium edule HOM05D005762 ORTHO05D006823 9.2e-91 337.0 191 91.6
ClCG06G012630 Citrullus lanatus HOM05D005762 ORTHO05D006823 2.3e-89 332.4 190 90.0
MELO3C010201.2 Cucumis melo HOM05D005762 ORTHO05D006823 6.0e-82 307.8 190 85.3
Prupe.7G266400 Prunus persica HOM05D005762 ORTHO05D006823 1.2e-74 283.5 191 78.0
Gorai.008G090500 Gossypium raimondii HOM05D005762 ORTHO05D006823 1.1e-72 276.9 191 74.3
Duzib147G0575 Durio zibethinus HOM05D005762 ORTHO05D006823 8.1e-71 270.8 191 71.7
Gohir.D12G082500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 2.3e-70 269.2 191 73.3
Thecc.01G095900 Theobroma cacao HOM05D005762 ORTHO05D006823 2.3e-70 269.2 191 72.3
COL.COLO4_27292 Corchorus olitorius HOM05D005762 ORTHO05D006823 8.9e-70 267.3 191 69.1
Eucgr.C02513 Eucalyptus grandis HOM05D005762 ORTHO05D006823 5.8e-69 264.6 191 72.8
Eucgr.L01546 Eucalyptus grandis HOM05D005762 ORTHO05D006823 5.8e-69 264.6 191 72.8
Phvul.004G044600 Phaseolus vulgaris HOM05D005762 ORTHO05D006823 5.8e-69 264.6 193 73.1
Gohir.A12G083500 Gossypium hirsutum HOM05D005762 ORTHO05D006823 2.9e-68 262.3 191 73.3
Lalb_Chr05g0215351 Lupinus albus HOM05D005762 ORTHO05D006823 2.9e-68 262.3 194 74.7
CiPaw.16G107100 Carya illinoinensis HOM05D005762 ORTHO05D006823 3.7e-68 261.9 191 74.3
Lalb_Chr16g0380631 Lupinus albus HOM05D005762 ORTHO05D006823 3.7e-68 261.9 196 74.5
TWI34G1522 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 2.4e-67 259.2 191 72.3
arahy.Tifrunner.gnm1.ann1.0D8FTQ Arachis hypogaea HOM05D005762 ORTHO05D006823 5.4e-67 258.1 190 74.2
Lj2g0011355 Lotus japonicus HOM05D005762 ORTHO05D006823 5.4e-67 258.1 193 73.6
Glyma.19G036900 Glycine max HOM05D005762 ORTHO05D006823 9.2e-67 257.3 193 73.6
Atru.chr7.1163 Acer truncatum HOM05D005762 ORTHO05D006823 1.6e-66 256.5 191 69.6
arahy.Tifrunner.gnm1.ann1.3SV7H4 Arachis hypogaea HOM05D005762 ORTHO05D006823 3.5e-66 255.4 191 73.8
TWI63G0575 Tripterygium wilfordii HOM05D005762 ORTHO05D006823 3.5e-66 255.4 189 70.9
Dinv42823 Davidia involucrata HOM05D005762 ORTHO05D006823 1.0e-65 253.8 191 71.7
Dinv43277 Davidia involucrata HOM05D005762 ORTHO05D006823 1.0e-65 253.8 191 71.7
TAR625G0504 Trochodendron aralioides HOM05D005762 ORTHO05D006823 2.5e-64 249.2 194 68.6
VMungo1215G2009 Vigna mungo HOM05D005762 ORTHO05D006823 4.3e-64 248.4 243 59.7
GSVIVG01023684001 Vitis vinifera HOM05D005762 ORTHO05D006823 1.6e-63 246.5 189 69.3
Hma1.2p1_0222F.1_g093870 Hydrangea macrophylla HOM05D005762 ORTHO05D006823 1.1e-62 243.8 191 68.1
Manes.14G112900 Manihot esculenta HOM05D005762 ORTHO05D006823 1.1e-62 243.8 191 70.2
QL02p094110 Quercus lobata HOM05D005762 ORTHO05D006823 1.4e-62 243.4 191 69.6
Lsat_1_v5_gn_7_49601 Lactuca sativa HOM05D005762 ORTHO05D006823 2.0e-61 239.6 191 67.5
Rhsim01G0024500 Rhododendron simsii HOM05D005762 ORTHO05D006823 7.6e-61 237.7 188 69.1
Psat1g057520 Pisum sativum HOM05D005762 ORTHO05D006823 9.9e-61 237.3 192 69.3
Ciclev10009604m.g Citrus clementina HOM05D005762 ORTHO05D006823 1.3e-60 236.9 191 66.5
Aqoxy6G02656 Aquilegia oxysepala HOM05D005762 ORTHO05D006823 1.9e-59 233.0 194 66.0
Haze_19144 Corylus avellana HOM05D005762 ORTHO05D006823 5.4e-59 231.5 182 69.2
HanXRQChr09g0244521 Helianthus annuus HOM05D005762 ORTHO05D006823 7.1e-59 231.1 190 65.3
PSO761G0310 Papaver somniferum HOM05D005762 ORTHO05D006823 9.3e-59 230.7 195 67.2
Sopen04g027270 Solanum pennellii HOM05D005762 ORTHO05D006823 1.6e-58 229.9 190 66.3
PGSC0003DMG400024111 Solanum tuberosum HOM05D005762 ORTHO05D006823 2.1e-58 229.6 190 66.3
Sabra06G0137900 Salix brachista HOM05D005762 ORTHO05D006823 3.5e-58 228.8 191 64.9
Solyc04g071310.3 Solanum lycopersicum HOM05D005762 ORTHO05D006823 3.5e-58 228.8 190 66.3
Nn8g40046 Nelumbo nucifera HOM05D005762 ORTHO05D006823 4.6e-58 228.4 183 68.9
Potri.006G180900 Populus trichocarpa HOM05D005762 ORTHO05D006823 4.6e-58 228.4 188 66.0
FvH4_1g00560 Fragaria vesca HOM05D005762 ORTHO05D006823 1.0e-57 227.3 189 66.7
HanXRQChr03g0066031 Helianthus annuus HOM05D005762 ORTHO05D006823 1.0e-57 227.3 191 62.8
MD15G1148500 Malus domestica HOM05D005762 ORTHO05D006823 1.7e-57 226.5 194 65.5
Nitab4.5_0000032g0060 Nicotiana tabacum HOM05D005762 ORTHO05D006823 2.3e-57 226.1 190 66.3
Peaxi162Scf00765g00313 Petunia axillaris HOM05D005762 ORTHO05D006823 5.1e-57 224.9 191 67.0
PGR102G1062 Punica granatum HOM05D005762 ORTHO05D006823 5.1e-57 224.9 191 64.9
FAN26G0640 Fragaria x ananassa HOM05D005762 ORTHO05D006823 4.3e-56 221.9 189 65.6
MBI02_g32399_MAGBIO Magnolia biondii HOM05D005762 ORTHO05D006823 5.6e-56 221.5 197 64.5
DCAR_019992 Daucus carota HOM05D005762 ORTHO05D006823 7.3e-56 221.1 188 61.2
SGA_v2.0_scaffold118G32537 Striga asiatica HOM05D005762 ORTHO05D006823 2.1e-55 219.5 191 63.9
DCAR_014801 Daucus carota HOM05D005762 ORTHO05D006823 3.6e-55 218.8 188 61.7
RcHm_v2.0_Chr2g0085191 Rosa chinensis HOM05D005762 ORTHO05D006823 4.8e-55 218.4 191 66.0
HPP92_021390 Vanilla planifolia HOM05D005762 ORTHO05D006823 4.8e-55 218.4 197 62.4
Cc00_g06610 Coffea canephora HOM05D005762 ORTHO05D006823 8.1e-55 217.6 194 62.4
SalBow7G3475 Salvia bowleyana HOM05D005762 ORTHO05D006823 8.1e-55 217.6 190 62.6
Ca_04188_v3 Cicer arietinum L. HOM05D005762 ORTHO05D006823 1.8e-54 216.5 190 64.7
Potri.018G103200 Populus trichocarpa HOM05D005762 ORTHO05D006823 2.4e-54 216.1 191 64.9
Lj2g0017040 Lotus japonicus HOM05D005762 ORTHO05D006823 3.1e-54 215.7 181 68.0
CANSAT11G0529 Cannabis sativa HOM05D005762 ORTHO05D006823 1.2e-53 213.8 192 63.5
CAN.G268.6 Capsicum annuum HOM05D005762 ORTHO05D006823 1.2e-53 213.8 182 65.4
Actinidia24370 Actinidia chinensis HOM05D000058 ORTHO05D000077 1.5e-53 213.4 194 63.4
Medtr6g006900 Medicago truncatula HOM05D005762 ORTHO05D006823 1.5e-53 213.4 190 66.3
THA.LOC104814737 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 1.5e-53 213.4 191 59.7
TPR.G14135 Trifolium pratense HOM05D005762 ORTHO05D006823 1.5e-53 213.4 190 65.3
Cpa.g.sc199.22 Carica papaya HOM05D005762 ORTHO05D006823 3.4e-53 212.2 176 65.9
MSTRG.25456 Avicennia marina HOM05D005762 ORTHO05D006823 7.6e-53 211.1 194 62.9
CSS0036647 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 1.7e-52 209.9 183 64.5
Sabra18G0088700 Salix brachista HOM05D000058 ORTHO05D000077 2.2e-52 209.5 178 63.5
PSO357G0319 Papaver somniferum HOM05D005762 ORTHO05D006823 1.1e-51 207.2 193 60.6
ATR0767G248 Amborella trichopoda HOM05D005762 ORTHO05D006823 1.9e-51 206.5 193 61.1
PSO170G6399 Papaver somniferum HOM05D005762 ORTHO05D006823 9.3e-51 204.1 193 60.1
vmacro06054 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 3.5e-50 202.2 194 61.9
Sp7g28690 Schrenkiella parvula HOM05D005762 ORTHO05D006823 2.3e-49 199.5 191 56.0
Migut.C01281 Erythranthe guttata HOM05D005762 ORTHO05D006823 3.9e-49 198.7 191 59.7
BcaB03g12662 Brassica carinata HOM05D005762 ORTHO05D006823 2.5e-48 196.1 191 56.5
CDE02G2562 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 4.3e-48 195.3 193 57.0
ECA240G2400 Erigeron canadensis HOM05D006258 ORTHO05D007961 1.1e-46 190.7 174 60.3
CSS0014952 Camellia sinensis var. sinensis HOM05D005762 ORTHO05D006823 1.4e-46 190.3 195 56.9
Os11g0473100 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 2.4e-46 189.5 186 58.1
Dinv41344 Davidia involucrata HOM05D005762 ORTHO05D006823 4.0e-46 188.7 146 69.2
unitig_0.g206 Utricularia gibba HOM05D005762 ORTHO05D006823 4.0e-46 188.7 191 56.5
CDE06G1965 Ceratophyllum demersum HOM05D005762 ORTHO05D006823 1.5e-45 186.8 193 56.0
CARHR238660 Cardamine hirsuta HOM05D005762 ORTHO05D006823 2.6e-45 186.0 189 54.0
BcaNung02738 Brassica carinata HOM05D005762 ORTHO05D006823 1.7e-44 183.3 204 52.0
SEGI_01916 Sequoiadendron giganteum HOM05D005762 ORTHO05D006823 1.7e-44 183.3 191 57.1
unitig_60.g25712 Utricularia gibba HOM05D005762 ORTHO05D006823 8.4e-44 181.0 188 54.3
AT4G30820 Arabidopsis thaliana HOM05D005762 ORTHO05D006823 1.4e-43 180.3 191 53.9
Lj9A721G60 Lonicera japonica HOM05D005762 ORTHO05D006823 1.2e-42 177.2 147 66.7
Carub.0007s0975 Capsella rubella HOM05D005762 ORTHO05D006823 1.6e-42 176.8 191 54.5
Os06g0171700 Oryza sativa ssp. japonica HOM05D005762 ORTHO05D006823 3.5e-42 175.6 190 54.2
SGA_v2.0_scaffold69G23111 Striga asiatica HOM05D005762 ORTHO05D006823 4.6e-42 175.3 212 51.4
Zm00001eb215170 Zea mays HOM05D005762 ORTHO05D006823 4.6e-42 175.3 188 54.8
Zm00001eb375400 Zea mays HOM05D005762 ORTHO05D006823 4.6e-42 175.3 188 54.8
BcaNung01558 Brassica carinata HOM05D005762 ORTHO05D006823 1.1e-40 170.6 210 48.1
BraA08t33867Z Brassica rapa HOM05D005762 ORTHO05D006823 1.5e-40 170.2 192 51.6
C03p88490 Brassica napus HOM05D005762 ORTHO05D006823 2.5e-40 169.5 188 52.1
Mapoly0025s0086 Marchantia polymorpha HOM05D005762 ORTHO05D006823 4.3e-40 168.7 189 49.7
C07p58230 Brassica napus HOM05D000058 ORTHO05D000077 7.4e-40 167.9 188 49.5
BolC7t46281H Brassica oleracea HOM05D000058 ORTHO05D000077 7.4e-40 167.9 188 49.5
SHI02837 Sapria himalayana HOM05D005762 ORTHO05D006823 1.8e-38 163.3 193 50.3
A03p60360 Brassica napus HOM05D005762 ORTHO05D006823 7.6e-37 157.9 188 48.4
Rhsim03G0259100 Rhododendron simsii HOM05D005762 ORTHO05D006823 1.7e-36 156.8 146 61.0
BcaC01g01136 Brassica carinata HOM05D005762 ORTHO05D006823 2.9e-36 156.0 188 48.4
A08p19060 Brassica napus HOM05D005762 ORTHO05D006823 4.9e-36 155.2 220 45.0
AagrBONN_evm.TU.Sc2ySwM_344.3285 Anthoceros agrestis HOM05D005762 ORTHO05D006823 8.4e-36 154.5 188 47.3
Sc18g0003110 Simmondsia chinensis HOM05D005762 ORTHO05D006823 7.1e-35 151.4 148 63.5
Cfa020788 Carpinus fangiana HOM05D005762 ORTHO05D006823 3.5e-34 149.1 112 72.3
Pp3c7_18190 Physcomitrium patens HOM05D005762 ORTHO05D006823 3.5e-34 149.1 186 47.8
THA.LOC104804493 Tarenaya hassleriana HOM05D005762 ORTHO05D006823 8.7e-33 144.4 139 56.8
SMO356G0316 Selaginella moellendorffii HOM05D005762 ORTHO05D006823 9.6e-32 141.0 190 45.3
BraA03t15075Z Brassica rapa HOM05D005762 ORTHO05D006823 6.9e-30 134.8 166 48.2
AL7G21310 Arabidopsis lyrata HOM05D005762 ORTHO05D006823 3.4e-29 132.5 147 54.4
Thhalv10026542m.g Eutrema salsugineum HOM05D005762 ORTHO05D006823 3.8e-28 129.0 146 52.7
CBR_g45648 Chara braunii HOM05D005762 ORTHO05D006823 1.1e-27 127.5 206 43.7
Oeu026957.1 Olea europaea HOM05D005762 ORTHO05D006823 4.2e-27 125.6 131 57.3
BolC3t21157H Brassica oleracea HOM05D005762 ORTHO05D006823 3.3e-24 115.9 154 47.4
vmacro13053 Vaccinium macrocarpon HOM05D005762 ORTHO05D006823 1.6e-23 113.6 74 81.1
AUR62025367 Chenopodium quinoa HOM05D005762 ORTHO05D006823 1.1e-22 110.9 82 69.5
AUR62028383 Chenopodium quinoa HOM05D005762 ORTHO05D006823 2.4e-22 109.8 82 68.3
EL10Ac8g18914 Beta vulgaris HOM05D005762 ORTHO05D006823 9.0e-22 107.8 82 68.3
Dinv09756 Davidia involucrata HOM05D000667 ORTHO05D002614 9.0e-22 107.8 88 63.6
CsaV3_1G029180 Cucumis sativus L. HOM05D005762 ORTHO05D006823 5.9e-21 105.1 59 89.8
vmacro13054 Vaccinium macrocarpon HOM05D006258 ORTHO05D007961 8.5e-20 101.3 89 58.4
CBR_g3032 Chara braunii HOM05D005762 ORTHO05D006823 1.9e-19 100.1 89 58.4
SGA_v2.0_scaffold63G21769 Striga asiatica HOM05D005762 ORTHO05D006823 1.4e-17 94.0 133 48.1
Rhsim01G0060600 Rhododendron simsii HOM05D005762 ORTHO05D006823 5.1e-17 92.0 103 58.3
Nitab4.5_0008759g0010 Nicotiana tabacum HOM05D005762 ORTHO05D006823 3.3e-16 89.4 81 58.0
SMO004G0001 Selaginella moellendorffii HOM05D028982 ORTHO05D006823 3.3e-16 89.4 109 46.8
PSO357G0231 Papaver somniferum HOM05D005762 ORTHO05D006823 4.1e-14 82.4 131 40.5
MCO02G015 Micromonas commoda HOM05D005762 ORTHO05D006823 2.6e-13 79.7 85 51.8
Oeu064081.1 Olea europaea HOM05D005762 ORTHO05D006823 2.6e-13 79.7 63 69.8
Aa31LG2G19570 Aethionema arabicum HOM05D005762 ORTHO05D006823 1.0e-12 77.8 92 46.7
Cre16.g672753 Chlamydomonas reinhardtii HOM05D005762 ORTHO05D006823 1.2e-10 70.9 181 30.9
CiPaw.15G164900 Carya illinoinensis HOM05D005762 ORTHO05D006823 6.1e-10 68.6 85 49.4
MD02G1004700 Malus domestica HOM05D005762 ORTHO05D006823 1.0e-09 67.8 58 60.3


User provided reference genes

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