Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0007288 Sechium edule HOM05D007284 ORTHO05D009303 1.5e-172 609.4 298 100.0
MELO3C012605.2 Cucumis melo HOM05D007284 ORTHO05D009303 7.3e-143 510.8 313 84.3
CsaV3_7G022920 Cucumis sativus L. HOM05D007284 ORTHO05D009303 4.0e-141 505.0 313 83.7
ClCG09G022720 Citrullus lanatus HOM05D007284 ORTHO05D009303 3.7e-139 498.4 321 81.9
QL04p084030 Quercus lobata HOM05D007284 ORTHO05D009303 5.4e-106 388.3 290 67.9
Lj6g0023291 Lotus japonicus HOM05D007284 ORTHO05D009303 5.1e-104 381.7 259 72.6
Actinidia12765 Actinidia chinensis HOM05D007284 ORTHO05D009303 8.7e-104 380.9 262 71.4
GSVIVG01036771001 Vitis vinifera HOM05D007284 ORTHO05D009303 1.5e-103 380.2 282 68.1
Glyma.15G261800 Glycine max HOM05D007284 ORTHO05D009303 1.9e-103 379.8 304 65.5
Haze_07795 Corylus avellana HOM05D007284 ORTHO05D009303 5.6e-103 378.3 255 72.2
Ciclev10005140m.g Citrus clementina HOM05D007284 ORTHO05D009303 3.6e-102 375.6 259 71.0
TPR.G33826 Trifolium pratense HOM05D007284 ORTHO05D009303 4.8e-102 375.2 260 70.4
VMungo1080G0891 Vigna mungo HOM05D007284 ORTHO05D009303 4.8e-102 375.2 256 72.3
FvH4_3g14920 Fragaria vesca HOM05D007284 ORTHO05D009303 6.2e-102 374.8 260 72.3
Phvul.005G030300 Phaseolus vulgaris HOM05D007284 ORTHO05D009303 1.1e-101 374.0 256 71.5
FAN16G2030 Fragaria x ananassa HOM05D007284 ORTHO05D009303 1.4e-101 373.6 260 72.3
Nn7g38251 Nelumbo nucifera HOM05D007284 ORTHO05D009303 1.4e-101 373.6 292 65.4
Ca_03559_v3 Cicer arietinum L. HOM05D007284 ORTHO05D009303 1.8e-101 373.2 258 69.8
FAN21G0110 Fragaria x ananassa HOM05D007284 ORTHO05D009303 2.4e-101 372.9 260 73.1
CSS0021332 Camellia sinensis var. sinensis HOM05D007284 ORTHO05D009303 3.1e-101 372.5 253 72.7
CSS0030417 Camellia sinensis var. sinensis HOM05D007284 ORTHO05D009303 4.0e-101 372.1 253 72.7
Prupe.4G133700 Prunus persica HOM05D007284 ORTHO05D009303 5.3e-101 371.7 307 63.8
Lalb_Chr01g0015491 Lupinus albus HOM05D007284 ORTHO05D009303 6.9e-101 371.3 294 63.9
CANSAT80G0889 Cannabis sativa HOM05D007284 ORTHO05D009303 9.0e-101 370.9 248 73.0
FAN11G3872 Fragaria x ananassa HOM05D007284 ORTHO05D009303 1.2e-100 370.5 260 71.5
Medtr2g066060 Medicago truncatula HOM05D007284 ORTHO05D009303 1.2e-100 370.5 257 71.2
RcHm_v2.0_Chr5g0024521 Rosa chinensis HOM05D007284 ORTHO05D009303 2.0e-100 369.8 255 71.8
Sc20g0004040 Simmondsia chinensis HOM05D007284 ORTHO05D009303 4.5e-100 368.6 252 70.2
Aqoxy1G01433 Aquilegia oxysepala HOM05D007284 ORTHO05D009303 9.9e-100 367.5 263 68.4
MD05G1233900 Malus domestica HOM05D007284 ORTHO05D009303 2.2e-99 366.3 256 71.5
PGR142G3366 Punica granatum HOM05D007284 ORTHO05D009303 2.2e-99 366.3 291 65.3
TAR626G1605 Trochodendron aralioides HOM05D007284 ORTHO05D009303 2.2e-99 366.3 262 69.8
MSTRG.25784 Avicennia marina HOM05D007284 ORTHO05D009303 6.4e-99 364.8 248 70.6
Sp1g41820 Schrenkiella parvula HOM05D007284 ORTHO05D009303 6.4e-99 364.8 262 68.3
CiPaw.11G060600 Carya illinoinensis HOM05D007284 ORTHO05D009303 1.1e-98 364.0 248 72.6
TWI38G1052 Tripterygium wilfordii HOM05D007284 ORTHO05D009303 1.1e-98 364.0 291 64.3
Thhalv10011505m.g Eutrema salsugineum HOM05D007284 ORTHO05D009303 1.4e-98 363.6 248 70.2
Manes.14G009100 Manihot esculenta HOM05D007284 ORTHO05D009303 1.4e-98 363.6 259 68.7
vmacro11697 Vaccinium macrocarpon HOM05D007284 ORTHO05D009303 1.9e-98 363.2 260 68.8
Cc05_g16380 Coffea canephora HOM05D007284 ORTHO05D009303 3.2e-98 362.5 305 62.6
Eucgr.F01475 Eucalyptus grandis HOM05D007284 ORTHO05D009303 3.2e-98 362.5 253 71.1
AL1G64490 Arabidopsis lyrata HOM05D007284 ORTHO05D009303 1.2e-97 360.5 261 66.3
BolC3t21643H Brassica oleracea HOM05D007284 ORTHO05D009303 1.2e-97 360.5 258 69.4
DCAR_016839 Daucus carota HOM05D007284 ORTHO05D009303 2.7e-97 359.4 261 69.3
Migut.M01528 Erythranthe guttata HOM05D007284 ORTHO05D009303 2.7e-97 359.4 253 70.0
Aa31LG3G3810 Aethionema arabicum HOM05D007284 ORTHO05D009303 4.6e-97 358.6 262 66.4
A08p00030 Brassica napus HOM05D007284 ORTHO05D009303 4.6e-97 358.6 254 70.5
CARHR045950 Cardamine hirsuta HOM05D007284 ORTHO05D009303 6.0e-97 358.2 261 67.0
Nitab4.5_0006109g0080 Nicotiana tabacum HOM05D007284 ORTHO05D009303 1.8e-96 356.7 259 68.7
AT1G56180 Arabidopsis thaliana HOM05D007284 ORTHO05D009303 2.3e-96 356.3 257 66.5
Psat1g005720 Pisum sativum HOM05D007284 ORTHO05D009303 1.9e-95 353.2 264 64.8
EL10Ac2g03257 Beta vulgaris HOM05D007284 ORTHO05D009303 4.3e-95 352.1 289 62.3
Carub.0001s4489 Capsella rubella HOM05D007284 ORTHO05D009303 5.6e-95 351.7 262 65.6
Gorai.009G354200 Gossypium raimondii HOM05D007284 ORTHO05D009303 7.4e-95 351.3 315 57.5
Nitab4.5_0000029g0310 Nicotiana tabacum HOM05D007284 ORTHO05D009303 1.6e-94 350.1 299 61.9
SGA_v2.0_scaffold7G03609 Striga asiatica HOM05D005600 ORTHO05D006682 2.1e-94 349.7 252 67.5
Oeu027719.1 Olea europaea HOM05D007284 ORTHO05D009303 2.8e-94 349.4 297 61.3
Peaxi162Scf00452g00332 Petunia axillaris HOM05D007284 ORTHO05D009303 2.8e-94 349.4 255 65.5
THA.LOC104826324 Tarenaya hassleriana HOM05D007284 ORTHO05D009303 2.8e-94 349.4 256 66.4
Gohir.A04G050300 Gossypium hirsutum HOM05D007284 ORTHO05D009303 8.1e-94 347.8 308 58.4
Thecc.07G179000 Theobroma cacao HOM05D007284 ORTHO05D009303 1.4e-93 347.1 269 64.3
SalBow8G2626 Salvia bowleyana HOM05D007284 ORTHO05D009303 3.1e-93 345.9 259 68.3
Potri.010G171400 Populus trichocarpa HOM05D007284 ORTHO05D009303 4.0e-93 345.5 261 65.1
Sabra10G0131000 Salix brachista HOM05D007284 ORTHO05D009303 2.6e-92 342.8 261 64.4
BraA08t32060Z Brassica rapa HOM05D007284 ORTHO05D009303 3.4e-92 342.4 285 62.8
Atru.BG.178.p Acer truncatum HOM05D007284 ORTHO05D009303 8.4e-91 337.8 241 70.1
HanXRQChr09g0241461 Helianthus annuus HOM05D007284 ORTHO05D009303 5.5e-90 335.1 258 65.5
Lsat_1_v5_gn_8_166560 Lactuca sativa HOM05D007284 ORTHO05D009303 5.5e-90 335.1 300 59.0
CAN.G943.54 Capsicum annuum HOM05D007284 ORTHO05D009303 1.6e-89 333.6 285 61.4
ATR0752G029 Amborella trichopoda HOM05D007284 ORTHO05D009303 2.7e-89 332.8 243 66.3
PGSC0003DMG400022231 Solanum tuberosum HOM05D007284 ORTHO05D009303 1.8e-88 330.1 248 66.9
Os02g0169000 Oryza sativa ssp. japonica HOM05D007284 ORTHO05D009303 6.7e-88 328.2 249 63.5
Rhsim05G0210300 Rhododendron simsii HOM05D007284 ORTHO05D007583 4.8e-86 322.0 289 59.2
Solyc07g066620.3 Solanum lycopersicum HOM05D007284 ORTHO05D009303 1.1e-85 320.9 255 63.5
Sopen07g034770 Solanum pennellii HOM05D007284 ORTHO05D009303 2.4e-85 319.7 255 63.1
arahy.Tifrunner.gnm1.ann1.B27V0W Arachis hypogaea HOM05D007284 ORTHO05D009303 1.2e-84 317.4 255 62.7
Rhsim06G0242500 Rhododendron simsii HOM05D007284 ORTHO05D009303 2.0e-84 316.6 218 70.6
Lj8C189T5 Lonicera japonica HOM05D007284 ORTHO05D009303 5.9e-84 315.1 196 76.0
Gohir.D05G330900 Gossypium hirsutum HOM05D007284 ORTHO05D009303 2.9e-83 312.8 292 57.9
ECA246G3945 Erigeron canadensis HOM05D007284 ORTHO05D009303 9.3e-82 307.8 246 61.4
Hund20106 Selenicereus undatus HOM05D007284 ORTHO05D009303 3.6e-81 305.8 306 54.9
Hma1.2p1_0334F.1_g128446 Hydrangea macrophylla HOM05D007284 ORTHO05D009303 1.8e-80 303.5 181 79.0
HPP92_005940 Vanilla planifolia HOM05D007284 ORTHO05D009303 2.2e-78 296.6 198 69.2
CDE05G0944 Ceratophyllum demersum HOM05D007284 ORTHO05D009303 4.1e-77 292.4 181 74.0
SEGI_22810 Sequoiadendron giganteum HOM05D007284 ORTHO05D009303 9.0e-77 291.2 241 57.3
Dinv42480 Davidia involucrata HOM05D007284 ORTHO05D009303 1.6e-73 280.4 209 67.9
QL04p084155 Quercus lobata HOM05D007284 ORTHO05D009303 1.4e-69 267.3 157 80.9
unitig_46.g18516 Utricularia gibba HOM05D007284 ORTHO05D009303 3.4e-68 262.7 250 55.6
AUR62036984 Chenopodium quinoa HOM05D007284 ORTHO05D009303 1.0e-67 261.2 200 64.0
Cpa.g.sc1889.2 Carica papaya HOM05D007284 ORTHO05D009303 1.6e-65 253.8 155 78.7
Mapoly0080s0063 Marchantia polymorpha HOM05D007284 ORTHO05D009303 1.7e-59 233.8 263 47.9
Zm00001eb233060 Zea mays HOM05D007284 ORTHO05D009303 1.0e-56 224.6 139 75.5
AagrBONN_evm.TU.Sc2ySwM_228.3587 Anthoceros agrestis HOM05D007284 ORTHO05D009303 1.1e-55 221.1 250 46.4
CAN.G178.11 Capsicum annuum HOM05D007284 ORTHO05D009303 7.7e-52 208.4 135 74.1
Pp3c27_3430 Physcomitrium patens HOM05D007284 ORTHO05D009303 2.5e-50 203.4 286 40.6
arahy.Tifrunner.gnm1.ann1.PEB99A Arachis hypogaea HOM05D007284 ORTHO05D009303 1.6e-49 200.7 237 49.4
Ah.10g033710 Amaranthus hybridus HOM05D007284 ORTHO05D009303 1.0e-48 198.0 298 40.9
CBR_g81551 Chara braunii HOM05D007284 ORTHO05D009303 3.1e-45 186.4 196 48.5
Cpa.g.c34251 Carica papaya HOM05D007284 ORTHO05D009303 1.9e-21 107.5 98 53.1
Atru.chr1.102 Acer truncatum HOM05D007284 ORTHO05D009303 1.2e-17 94.7 49 87.8
FvH4_3g14870 Fragaria vesca HOM05D007284 ORTHO05D009303 6.4e-14 82.4 143 42.0
MD05G1233700 Malus domestica HOM05D007284 ORTHO05D009303 3.0e-11 73.6 53 67.9
arahy.Tifrunner.gnm1.ann1.VE80E0 Arachis hypogaea HOM05D002316 ORTHO05D002280 6.2e-09 65.9 35 82.9
AUR62036986 Chenopodium quinoa HOM05D007284 ORTHO05D009303 2.6e-07 60.5 126 33.3
Lsat_1_v5_gn_1_15020 Lactuca sativa HOM05D006515 ORTHO05D008125 1.3e-06 58.2 205 25.4
PSO170G3637 Papaver somniferum HOM05D003567 ORTHO05D004117 1.7e-06 57.8 150 34.0
AT2G21960 Arabidopsis thaliana HOM05D006515 ORTHO05D008125 2.2e-06 57.4 222 26.1
Cc02_g32800 Coffea canephora HOM05D003567 ORTHO05D004117 4.9e-06 56.2 125 32.8
PSO302G0180 Papaver somniferum HOM05D003567 ORTHO05D004117 4.9e-06 56.2 150 33.3
Thecc.01G112600 Theobroma cacao HOM05D006515 ORTHO05D008125 4.9e-06 56.2 231 26.4
Sed0017789 Sechium edule HOM05D003567 ORTHO05D004117 8.4e-06 55.5 113 31.9
Sc07g0001530 Simmondsia chinensis HOM05D006515 ORTHO05D008125 8.4e-06 55.5 219 26.0


User provided reference genes

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