Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sed0006429 Sechium edule HOM05D006028 ORTHO05D007784 3.1e-159 565.1 288 100.0
ClCG05G012120 Citrullus lanatus HOM05D006028 ORTHO05D007784 2.8e-123 445.7 281 81.9
CsaV3_3G020280 Cucumis sativus L. HOM05D006028 ORTHO05D007784 5.2e-122 441.4 281 79.0
MELO3C023751.2 Cucumis melo HOM05D006028 ORTHO05D007784 1.9e-119 433.0 282 78.7
Cfa007919 Carpinus fangiana HOM05D006028 ORTHO05D007784 3.3e-92 342.4 282 63.8
Prupe.3G142900 Prunus persica HOM05D006028 ORTHO05D007784 5.6e-92 341.7 287 63.4
QL02p051229 Quercus lobata HOM05D006028 ORTHO05D007784 1.4e-90 337.0 281 62.6
TAR629G2682 Trochodendron aralioides HOM05D006028 ORTHO05D007784 9.0e-90 334.3 283 62.5
Haze_14158 Corylus avellana HOM05D006028 ORTHO05D007784 1.5e-89 333.6 290 62.1
Manes.02G069100 Manihot esculenta HOM05D006028 ORTHO05D007784 4.5e-89 332.0 282 60.6
Glyma.02G226700 Glycine max HOM05D006028 ORTHO05D007784 1.7e-88 330.1 281 61.6
Glyma.14G193600 Glycine max HOM05D006028 ORTHO05D007784 2.9e-88 329.3 281 60.9
CANSAT78G1220 Cannabis sativa HOM05D006028 ORTHO05D007784 4.9e-88 328.6 282 61.7
Thecc.04G133100 Theobroma cacao HOM05D006028 ORTHO05D007784 8.4e-88 327.8 285 61.8
GSVIVG01031016001 Vitis vinifera HOM05D006028 ORTHO05D007784 1.1e-87 327.4 282 60.3
Ciclev10011993m.g Citrus clementina HOM05D006028 ORTHO05D007784 1.9e-87 326.6 282 61.0
ECA246G2307 Erigeron canadensis HOM05D006028 ORTHO05D007784 2.5e-87 326.2 283 61.1
LjContig00155g0021894 Lotus japonicus HOM05D006028 ORTHO05D007784 1.6e-86 323.6 281 60.9
TWI53G1478 Tripterygium wilfordii HOM05D006028 ORTHO05D007784 4.6e-86 322.0 283 60.1
Actinidia15886 Actinidia chinensis HOM05D006028 ORTHO05D007784 1.3e-85 320.5 282 60.3
Potri.004G099000 Populus trichocarpa HOM05D006028 ORTHO05D007784 1.8e-85 320.1 286 59.1
Medtr5g070860 Medicago truncatula HOM05D006028 ORTHO05D007784 3.0e-85 319.3 281 60.1
Rhsim10G0067700 Rhododendron simsii HOM05D006028 ORTHO05D007784 5.1e-85 318.5 282 59.9
RcHm_v2.0_Chr6g0273571 Rosa chinensis HOM05D006028 ORTHO05D007784 7.4e-84 314.7 284 60.9
Atru.chr1.1685 Acer truncatum HOM05D006028 ORTHO05D007784 9.6e-84 314.3 282 57.8
MD00G1149900 Malus domestica HOM05D006028 ORTHO05D007784 9.6e-84 314.3 287 59.6
arahy.Tifrunner.gnm1.ann1.QNRR2Z Arachis hypogaea HOM05D006028 ORTHO05D007784 1.3e-83 313.9 282 59.9
CSS0038458 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 2.1e-83 313.2 282 58.9
Phvul.008G261300 Phaseolus vulgaris HOM05D006028 ORTHO05D007784 2.1e-83 313.2 281 59.4
VMungo0647G1142 Vigna mungo HOM05D006028 ORTHO05D007784 2.1e-83 313.2 281 58.7
CSS0040274 Camellia sinensis var. sinensis HOM05D006028 ORTHO05D007784 6.3e-83 311.6 282 58.5
TPR.G23017 Trifolium pratense HOM05D006028 ORTHO05D007784 1.1e-82 310.8 281 59.4
Lj2A441T56 Lonicera japonica HOM05D006028 ORTHO05D007784 1.4e-82 310.5 283 60.4
FAN07G0954 Fragaria x ananassa HOM05D006028 ORTHO05D007784 2.4e-82 309.7 283 59.0
Gohir.D12G052100 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.4e-82 309.7 285 58.6
FvH4_4g11350 Fragaria vesca HOM05D006028 ORTHO05D007784 4.1e-82 308.9 283 59.4
Hma1.2p1_1109F.1_g258060 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 4.1e-82 308.9 283 59.0
CiPaw.03G061900 Carya illinoinensis HOM05D006028 ORTHO05D007784 5.3e-82 308.5 284 58.5
Gorai.008G055200 Gossypium raimondii HOM05D006028 ORTHO05D007784 1.2e-81 307.4 285 58.2
Dinv34819 Davidia involucrata HOM05D006028 ORTHO05D007784 1.5e-81 307.0 254 66.5
Gohir.A12G053400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 5.9e-81 305.1 285 57.9
arahy.Tifrunner.gnm1.ann1.I9N3Y5 Arachis hypogaea HOM05D006028 ORTHO05D007784 1.3e-80 303.9 250 63.6
HanXRQChr12g0375811 Helianthus annuus HOM05D006028 ORTHO05D007784 3.2e-79 299.3 282 59.9
PGSC0003DMG400026405 Solanum tuberosum HOM05D006028 ORTHO05D007784 3.2e-79 299.3 283 56.9
Sopen02g030790 Solanum pennellii HOM05D006028 ORTHO05D007784 9.3e-79 297.7 283 56.9
CAN.G625.27 Capsicum annuum HOM05D006028 ORTHO05D007784 1.2e-78 297.4 283 56.9
Oeu008432.1 Olea europaea HOM05D006028 ORTHO05D007784 1.2e-78 297.4 282 57.4
Lalb_Chr10g0103311 Lupinus albus HOM05D006028 ORTHO05D007784 2.1e-78 296.6 282 56.7
Lsat_1_v5_gn_3_79681 Lactuca sativa HOM05D006028 ORTHO05D007784 7.9e-78 294.7 281 58.0
Cc07_g08770 Coffea canephora HOM05D006028 ORTHO05D007784 3.0e-77 292.7 284 56.3
COL.COLO4_09340 Corchorus olitorius HOM05D006028 ORTHO05D007784 8.7e-77 291.2 285 57.2
Nitab4.5_0000912g0170 Nicotiana tabacum HOM05D006028 ORTHO05D007784 8.7e-77 291.2 283 55.8
Nitab4.5_0004416g0010 Nicotiana tabacum HOM05D006028 ORTHO05D007784 8.7e-77 291.2 283 55.8
SalBow3G3202 Salvia bowleyana HOM05D006028 ORTHO05D007784 1.1e-76 290.8 283 58.0
Ca_05599_v3 Cicer arietinum L. HOM05D006028 ORTHO05D007784 1.9e-76 290.0 319 52.0
Migut.H00221 Erythranthe guttata HOM05D006028 ORTHO05D007784 1.9e-76 290.0 281 56.6
Aqoxy4G02499 Aquilegia oxysepala HOM05D006028 ORTHO05D007784 2.2e-75 286.6 284 55.6
SGA_v2.0_scaffold33G13509 Striga asiatica HOM05D006028 ORTHO05D007784 4.5e-73 278.9 283 56.9
PSO017G5051 Papaver somniferum HOM05D006028 ORTHO05D007784 7.7e-73 278.1 288 55.6
AUR62023297 Chenopodium quinoa HOM05D006028 ORTHO05D007784 1.3e-72 277.3 283 55.8
Nn3g17886 Nelumbo nucifera HOM05D006028 ORTHO05D007784 5.0e-72 275.4 285 55.1
PGR004G1556 Punica granatum HOM05D006028 ORTHO05D007784 6.5e-72 275.0 284 53.5
HPP92_018993 Vanilla planifolia HOM05D006028 ORTHO05D007784 3.2e-71 272.7 287 54.4
PSO478G1932 Papaver somniferum HOM05D006028 ORTHO05D007784 9.4e-71 271.2 288 54.5
MSTRG.17981 Avicennia marina HOM05D006028 ORTHO05D007784 1.6e-70 270.4 287 54.7
Duzib138G1322 Durio zibethinus HOM05D006028 ORTHO05D007784 4.6e-70 268.9 285 53.7
Zm00001eb007750 Zea mays HOM05D006028 ORTHO05D007784 4.6e-70 268.9 290 51.7
Hund13711 Selenicereus undatus HOM05D006028 ORTHO05D007784 3.0e-69 266.2 288 51.4
Peaxi162Scf00394g00620 Petunia axillaris HOM05D006028 ORTHO05D007784 7.4e-68 261.5 266 56.4
ATR1125G043 Amborella trichopoda HOM05D006028 ORTHO05D007784 2.8e-67 259.6 296 48.0
AT2G18410 Arabidopsis thaliana HOM05D006028 ORTHO05D007784 2.8e-67 259.6 290 52.8
Haze_14159 Corylus avellana HOM05D006028 ORTHO05D007784 2.8e-67 259.6 225 64.4
Sp3g31820 Schrenkiella parvula HOM05D006028 ORTHO05D007784 1.1e-66 257.7 290 52.8
SpUn0030_0010 Schrenkiella parvula HOM05D006028 ORTHO05D007784 1.1e-66 257.7 290 52.8
AUR62009005 Chenopodium quinoa HOM05D006028 ORTHO05D007784 4.1e-66 255.8 302 50.3
CDE05G1052 Ceratophyllum demersum HOM05D006028 ORTHO05D007784 9.1e-66 254.6 287 52.3
Os03g0201700 Oryza sativa ssp. japonica HOM05D006028 ORTHO05D007784 1.2e-65 254.2 293 48.5
EL10Ac2g04560 Beta vulgaris HOM05D006028 ORTHO05D007784 3.4e-65 252.7 281 52.0
Aa31LG8G15620 Aethionema arabicum HOM05D006028 ORTHO05D007784 4.5e-65 252.3 289 51.2
THA.LOC104820944 Tarenaya hassleriana HOM05D006028 ORTHO05D007784 4.5e-65 252.3 286 52.4
AL3G51690 Arabidopsis lyrata HOM05D006028 ORTHO05D007784 5.9e-65 251.9 290 51.7
Thhalv10022737m.g Eutrema salsugineum HOM05D006028 ORTHO05D007784 1.0e-64 251.1 287 52.6
Carub.0003s3256 Capsella rubella HOM05D006028 ORTHO05D007784 2.9e-64 249.6 286 52.1
BcaC06g36407 Brassica carinata HOM05D006028 ORTHO05D007784 3.8e-64 249.2 286 51.0
BcaB03g16641 Brassica carinata HOM05D006028 ORTHO05D007784 1.9e-63 246.9 290 50.7
vmacro05550 Vaccinium macrocarpon HOM05D006028 ORTHO05D007784 2.5e-63 246.5 283 51.9
A07p02330 Brassica napus HOM05D006028 ORTHO05D007784 7.2e-63 245.0 295 50.5
BolC7t40839H Brassica oleracea HOM05D006028 ORTHO05D007784 7.2e-63 245.0 290 50.7
C07p04450 Brassica napus HOM05D006028 ORTHO05D007784 1.6e-62 243.8 290 50.7
BraA07t28024Z Brassica rapa HOM05D006028 ORTHO05D007784 1.6e-62 243.8 295 50.5
Eucgr.F02499 Eucalyptus grandis HOM05D006028 ORTHO05D007784 2.7e-62 243.0 239 50.6
Sabra04G0080900 Salix brachista HOM05D006028 ORTHO05D007784 1.4e-61 240.7 288 47.9
CARHR109010 Cardamine hirsuta HOM05D006028 ORTHO05D007784 2.4e-58 229.9 287 48.8
Ah.16g101740 Amaranthus hybridus HOM05D006028 ORTHO05D007784 5.3e-58 228.8 281 46.6
QL02p051191 Quercus lobata HOM05D006028 ORTHO05D007784 2.0e-49 200.3 170 63.5
Pp3c5_13580 Physcomitrium patens HOM05D006028 ORTHO05D007784 1.7e-48 197.2 294 41.2
Solyc02g086100.4 Solanum lycopersicum HOM05D006028 ORTHO05D007784 2.7e-46 189.9 168 62.5
Hma1.2p1_1109F.1_g258070 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 8.0e-46 188.3 169 61.5
SEGI_33346 Sequoiadendron giganteum HOM05D006028 ORTHO05D007784 3.4e-44 183.0 237 46.8
Mapoly0156s0014 Marchantia polymorpha HOM05D006028 ORTHO05D007784 6.3e-43 178.7 293 38.9
SMO351G0506 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 3.6e-38 162.9 285 41.4
Psat0s2922g0040 Pisum sativum HOM05D006028 ORTHO05D007784 3.0e-37 159.8 165 50.3
Sc10g0001120 Simmondsia chinensis HOM05D006028 ORTHO05D007784 2.8e-35 153.3 179 48.6
SMO009G0016 Selaginella moellendorffii HOM05D006028 ORTHO05D007784 4.7e-30 136.0 282 37.6
AagrBONN_evm.TU.Sc2ySwM_368.1688 Anthoceros agrestis HOM05D006028 ORTHO05D007784 5.9e-25 119.0 142 52.1
Hma1.2p1_1109F.1_g258050 Hydrangea macrophylla HOM05D006028 ORTHO05D007784 3.9e-24 116.3 104 55.8
unitig_748.g7283 Utricularia gibba HOM05D006028 ORTHO05D007784 4.0e-21 106.3 114 52.6
SHI29124 Sapria himalayana HOM05D006028 ORTHO05D007784 2.6e-20 103.6 157 40.8
RcHm_v2.0_Chr1g0332721 Rosa chinensis HOM05D006028 ORTHO05D007784 1.3e-16 91.3 84 53.6
Gohir.A09G249300 Gossypium hirsutum HOM05D006028 ORTHO05D007784 8.6e-16 88.6 163 35.0
Gohir.1Z049310 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.5e-15 87.0 163 35.0
QL02p051195 Quercus lobata HOM05D006028 ORTHO05D007784 1.7e-11 74.3 64 53.1
CBR_g37698 Chara braunii HOM05D006028 ORTHO05D007784 6.4e-11 72.4 428 24.1
Potri.017G115566 Populus trichocarpa HOM05D006028 ORTHO05D007784 3.2e-10 70.1 78 43.6
Cpa.g.sc282.2 Carica papaya HOM05D006028 ORTHO05D007784 1.2e-09 68.2 64 50.0
Gorai.007G000700 Gossypium raimondii HOM05D006028 ORTHO05D007784 1.1e-07 61.6 67 46.3
Gohir.A06G000200 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.5e-07 60.5 66 45.5
Gohir.A12G000400 Gossypium hirsutum HOM05D006028 ORTHO05D007784 2.5e-07 60.5 66 45.5
Gohir.A01G231820 Gossypium hirsutum HOM05D006028 ORTHO05D007784 3.3e-07 60.1 76 40.8


User provided reference genes

Program Settings